View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1526_high_7 (Length: 296)
Name: NF1526_high_7
Description: NF1526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1526_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 191153 - 191432
Alignment:
| Q |
1 |
tcatcagagttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataaccccccaaaacatctt |
100 |
Q |
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| T |
191153 |
tcataagagttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataacctcccaaaacatctt |
191252 |
T |
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| Q |
101 |
ataaaagattggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgataaatctctttgttactaatgaacaccaataag |
200 |
Q |
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| T |
191253 |
ataaaagattggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgataaatctctttgttactaatgaacaccaataag |
191352 |
T |
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| Q |
201 |
cttgtcttgtgcacttcccctagaggattaggatccacgatcatagtaggatgcacaatattttccttggaacaaaaaag |
280 |
Q |
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| T |
191353 |
cttgtcttgtgcacttcccctagaggattaggatccacgatcatagtaggatgcacaatattttccttggaacaaaaaag |
191432 |
T |
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