View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15270_low_12 (Length: 228)
Name: NF15270_low_12
Description: NF15270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15270_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 40016722 - 40016931
Alignment:
| Q |
1 |
aaacgattactcacgtgaattgctcacttatcacgtgtcttgaacagtgttagtttttgtgtgtgttacttgtactactttctcacacactataaactca |
100 |
Q |
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| T |
40016722 |
aaacgattactcacgtgaattgctcacttatcacgtgtcttgaacagtgttagtttttgtgtgtgttacttgtactactttctcacacactataaaccca |
40016821 |
T |
|
| Q |
101 |
tctcaattgttagaatctcccaaatccttaacattttttcaacaccaacaatggcgaaaaacgttgcgattttcggtttattgttttctcttcttgcgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
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| T |
40016822 |
tctcaattgttagaatctcccaaatccttaacattctttcaacaccaacaatggcgaaaaacgtttcgatttttggtttattgttttctcttcttgcgtt |
40016921 |
T |
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| Q |
201 |
ggttccttct |
210 |
Q |
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|||||||||| |
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| T |
40016922 |
ggttccttct |
40016931 |
T |
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