View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15271_high_5 (Length: 348)
Name: NF15271_high_5
Description: NF15271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15271_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 3 - 333
Target Start/End: Complemental strand, 12157957 - 12157630
Alignment:
| Q |
3 |
caaaggtagtggttatggttcaaggcacataaatatctttttacttgaatttattatagaggcagttgagggtactacaaagtttaaacatgtatgttga |
102 |
Q |
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| T |
12157957 |
caaaggtagtggttatggttccaggctcataaatatcttttcacttgaatttattacagaggcagtcaaggatactacaaagtttaaacatgtatgatga |
12157858 |
T |
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| Q |
103 |
tattttgatcgtattagatttttgttttcacacgtatattgatattgacagtatatttgtgttttcacatgcatgttgaatattcaaccatgcatttcat |
202 |
Q |
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| T |
12157857 |
tattttgatcgtattagatttttgttttcacacgtctattgatattgacagtatatttgtgttttcacatgcatgttgaatattcaaccatgcatttcat |
12157758 |
T |
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| Q |
203 |
cattccatgaatttacaatataggaatacaatgattaaattgtacgagatataaaaataggctcaatgaaactaatatagactgagttgattagttgtgt |
302 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
12157757 |
catttcatgaatttacaatataggaatacaatgattaaattgtacgagatataaaaataggctcaatgaaactaatatagattgagttgattagttgtgt |
12157658 |
T |
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| Q |
303 |
tatgaaggtgtgctcaaacaacatgcaaagt |
333 |
Q |
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| T |
12157657 |
tatgatggt---ctcaaacaacatgcaaagt |
12157630 |
T |
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