View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15274_high_16 (Length: 206)
Name: NF15274_high_16
Description: NF15274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15274_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 44753775 - 44753947
Alignment:
| Q |
19 |
atcagcacaaaccaacaataatcttcatggcctaaacttttatcttccagatggtacaaaatcaaatcaattatacctatccaaccctgcactatcatct |
118 |
Q |
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| T |
44753775 |
atcagcacaaaccaacaataatcttcatggcctaaacttttatctaccagatggtacaaaatcaaatcaattatacctatccaaccctgcactatcatct |
44753874 |
T |
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| Q |
119 |
caacattcacatccaactatcactcttgacctcacttcaaacccatcaaattcttcaacatcatcaccctttg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44753875 |
caacattcacatccaactatcactcttgacctcacttcaaacccatcaaattcttcaacatcatcaccctttg |
44753947 |
T |
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