View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15275_low_15 (Length: 224)

Name: NF15275_low_15
Description: NF15275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15275_low_15
NF15275_low_15
[»] chr5 (51 HSPs)
chr5 (1-220)||(2179705-2179924)
chr5 (83-220)||(17574318-17574455)
chr5 (83-213)||(36057607-36057737)
chr5 (83-220)||(7267843-7267980)
chr5 (82-212)||(34327634-34327764)
chr5 (83-220)||(30468267-30468404)
chr5 (83-220)||(8539675-8539812)
chr5 (86-219)||(18624996-18625129)
chr5 (81-217)||(2854317-2854452)
chr5 (83-209)||(24541209-24541336)
chr5 (83-172)||(12738736-12738825)
chr5 (83-172)||(12801559-12801648)
chr5 (79-208)||(29621780-29621909)
chr5 (83-172)||(30463900-30463989)
chr5 (83-172)||(8541271-8541360)
chr5 (83-208)||(42473606-42473731)
chr5 (86-208)||(40780553-40780675)
chr5 (79-172)||(2852882-2852975)
chr5 (82-172)||(34328827-34328917)
chr5 (83-172)||(7269446-7269535)
chr5 (83-172)||(32134231-32134320)
chr5 (83-172)||(28813765-28813856)
chr5 (83-172)||(40782211-40782300)
chr5 (80-154)||(17577953-17578027)
chr5 (120-206)||(18728603-18728689)
chr5 (82-172)||(21842992-21843082)
chr5 (83-172)||(29620138-29620227)
chr5 (93-174)||(43492131-43492212)
chr5 (86-172)||(28822090-28822176)
chr5 (120-206)||(35395370-35395456)
chr5 (129-206)||(32087560-32087637)
chr5 (93-206)||(43318061-43318174)
chr5 (82-142)||(42471547-42471607)
chr5 (93-212)||(15459184-15459303)
chr5 (93-195)||(38596878-38596980)
chr5 (118-207)||(24496778-24496867)
chr5 (86-170)||(41493847-41493931)
chr5 (122-172)||(38176671-38176721)
chr5 (122-172)||(38203895-38203945)
chr5 (187-224)||(28819391-28819428)
chr5 (93-206)||(33256410-33256523)
chr5 (120-205)||(38178095-38178180)
chr5 (120-205)||(38205319-38205404)
chr5 (120-172)||(32089927-32089979)
chr5 (120-172)||(32835913-32835965)
chr5 (120-172)||(33257762-33257814)
chr5 (122-218)||(35292371-35292467)
chr5 (120-172)||(40330517-40330569)
chr5 (123-202)||(27077437-27077516)
chr5 (121-202)||(27075858-27075939)
chr5 (139-208)||(27349212-27349281)
[»] chr3 (80 HSPs)
chr3 (82-220)||(53190766-53190904)
chr3 (83-212)||(21348723-21348852)
chr3 (83-220)||(27899088-27899225)
chr3 (83-221)||(54898437-54898575)
chr3 (83-208)||(2226171-2226296)
chr3 (83-220)||(51684610-51684747)
chr3 (82-211)||(46112486-46112615)
chr3 (102-213)||(35905726-35905837)
chr3 (83-211)||(41977750-41977878)
chr3 (83-212)||(30599933-30600062)
chr3 (85-220)||(43765139-43765274)
chr3 (83-220)||(23293177-23293314)
chr3 (82-208)||(17515309-17515435)
chr3 (86-212)||(42279510-42279636)
chr3 (86-220)||(2377032-2377166)
chr3 (113-224)||(46197750-46197861)
chr3 (83-209)||(3152236-3152362)
chr3 (93-209)||(2660222-2660338)
chr3 (79-172)||(23291566-23291659)
chr3 (83-209)||(44794208-44794333)
chr3 (84-172)||(2378983-2379071)
chr3 (82-172)||(611222-611312)
chr3 (82-172)||(38193510-38193600)
chr3 (83-172)||(35903825-35903914)
chr3 (83-172)||(41979352-41979441)
chr3 (83-172)||(46308807-46308896)
chr3 (83-172)||(53094273-53094362)
chr3 (83-172)||(53187742-53187831)
chr3 (82-172)||(3150251-3150341)
chr3 (83-172)||(54900074-54900163)
chr3 (80-172)||(46310436-46310528)
chr3 (162-220)||(7884880-7884938)
chr3 (93-199)||(23774162-23774268)
chr3 (83-144)||(7884927-7884988)
chr3 (83-172)||(30598337-30598426)
chr3 (83-172)||(38191895-38191984)
chr3 (93-206)||(40508912-40509025)
chr3 (83-172)||(44267981-44268070)
chr3 (83-172)||(53092623-53092712)
chr3 (148-212)||(48830821-48830885)
chr3 (86-172)||(42282473-42282559)
chr3 (83-160)||(46114117-46114195)
chr3 (83-160)||(600725-600802)
chr3 (83-172)||(44795890-44795979)
chr3 (83-172)||(46609149-46609238)
chr3 (83-172)||(46611303-46611392)
chr3 (93-206)||(48633887-48634000)
chr3 (83-160)||(51686406-51686483)
chr3 (129-209)||(19987612-19987692)
chr3 (93-172)||(1847647-1847726)
chr3 (157-212)||(44276211-44276266)
chr3 (93-172)||(54412547-54412626)
chr3 (93-223)||(2977313-2977443)
chr3 (93-207)||(23888772-23888886)
chr3 (120-202)||(41021008-41021090)
chr3 (83-160)||(48829356-48829433)
chr3 (88-172)||(2661908-2661992)
chr3 (93-203)||(33113184-33113294)
chr3 (83-172)||(7883328-7883417)
chr3 (91-152)||(17516993-17517054)
chr3 (93-206)||(18430272-18430385)
chr3 (83-172)||(28626411-28626500)
chr3 (86-171)||(35572525-35572610)
chr3 (93-206)||(45898349-45898462)
chr3 (77-172)||(21350605-21350700)
chr3 (95-206)||(33852671-33852782)
chr3 (120-219)||(45257208-45257307)
chr3 (179-220)||(600805-600846)
chr3 (93-206)||(24382894-24383007)
chr3 (93-206)||(31887453-31887566)
chr3 (119-172)||(48635375-48635428)
chr3 (120-172)||(45897087-45897139)
chr3 (139-206)||(1845840-1845907)
chr3 (166-220)||(5133079-5133133)
chr3 (162-212)||(54092765-54092815)
chr3 (83-148)||(27897151-27897216)
chr3 (120-172)||(23887235-23887287)
chr3 (124-172)||(33051467-33051515)
chr3 (120-172)||(33111878-33111930)
chr3 (120-172)||(40508530-40508582)
[»] chr8 (68 HSPs)
chr8 (81-220)||(13282476-13282615)
chr8 (83-220)||(8609794-8609931)
chr8 (83-219)||(13486107-13486243)
chr8 (83-220)||(13108343-13108480)
chr8 (83-220)||(38547228-38547365)
chr8 (83-220)||(41042591-41042728)
chr8 (86-220)||(26242321-26242455)
chr8 (86-220)||(42941777-42941911)
chr8 (82-220)||(7745119-7745257)
chr8 (83-209)||(27691154-27691280)
chr8 (86-212)||(41825659-41825785)
chr8 (83-220)||(22272334-22272473)
chr8 (84-207)||(5036446-5036569)
chr8 (126-220)||(9673172-9673266)
chr8 (82-172)||(22273891-22273981)
chr8 (83-172)||(42943426-42943515)
chr8 (83-209)||(33708822-33708947)
chr8 (83-172)||(27692837-27692926)
chr8 (83-160)||(34681078-34681155)
chr8 (83-172)||(38548831-38548920)
chr8 (79-172)||(601704-601797)
chr8 (83-160)||(26238726-26238803)
chr8 (83-172)||(33762713-33762802)
chr8 (83-172)||(35509214-35509303)
chr8 (82-172)||(29239187-29239277)
chr8 (120-202)||(31201148-31201230)
chr8 (83-172)||(5038062-5038150)
chr8 (83-172)||(13106804-13106893)
chr8 (83-208)||(27406916-27407041)
chr8 (83-172)||(29237151-29237240)
chr8 (83-172)||(33761069-33761158)
chr8 (92-208)||(15305806-15305922)
chr8 (92-208)||(15486175-15486291)
chr8 (84-172)||(33707207-33707295)
chr8 (148-219)||(40339688-40339759)
chr8 (81-151)||(13484543-13484613)
chr8 (95-172)||(3151969-3152046)
chr8 (83-172)||(15308261-15308350)
chr8 (83-172)||(15488630-15488719)
chr8 (83-172)||(35510819-35510908)
chr8 (83-172)||(41040720-41040809)
chr8 (83-172)||(8608237-8608327)
chr8 (94-172)||(13283995-13284073)
chr8 (82-160)||(41823889-41823967)
chr8 (120-206)||(42897775-42897861)
chr8 (93-206)||(31821428-31821541)
chr8 (83-160)||(43262149-43262226)
chr8 (101-220)||(9184401-9184520)
chr8 (79-142)||(27404206-27404269)
chr8 (119-206)||(33750385-33750472)
chr8 (120-206)||(8654537-8654622)
chr8 (93-206)||(1320627-1320740)
chr8 (101-206)||(32822379-32822484)
chr8 (93-206)||(37526024-37526137)
chr8 (93-206)||(38882798-38882911)
chr8 (83-142)||(600760-600819)
chr8 (93-200)||(33160155-33160262)
chr8 (86-172)||(9671980-9672066)
chr8 (93-206)||(462371-462484)
chr8 (120-172)||(31199522-31199574)
chr8 (120-172)||(40019193-40019245)
chr8 (124-172)||(42894817-42894865)
chr8 (129-172)||(1322316-1322359)
chr8 (119-172)||(25707303-25707356)
chr8 (120-172)||(24526933-24526985)
chr8 (101-209)||(28433714-28433822)
chr8 (120-172)||(31823478-31823530)
chr8 (120-172)||(32824273-32824325)
[»] chr4 (58 HSPs)
chr4 (83-224)||(41781539-41781680)
chr4 (86-220)||(41761733-41761867)
chr4 (84-208)||(49523125-49523249)
chr4 (81-212)||(51011924-51012055)
chr4 (83-220)||(35404432-35404569)
chr4 (83-212)||(48813787-48813916)
chr4 (83-217)||(43519424-43519558)
chr4 (83-212)||(42980629-42980764)
chr4 (83-172)||(49524733-49524822)
chr4 (86-172)||(39345567-39345653)
chr4 (102-220)||(48646734-48646852)
chr4 (102-220)||(52868136-52868254)
chr4 (83-172)||(35401749-35401838)
chr4 (80-224)||(2693236-2693379)
chr4 (120-206)||(35996100-35996186)
chr4 (83-172)||(4173740-4173829)
chr4 (86-223)||(11601674-11601810)
chr4 (83-172)||(43507167-43507256)
chr4 (83-172)||(43508653-43508742)
chr4 (83-172)||(20493827-20493916)
chr4 (83-172)||(33264382-33264471)
chr4 (83-172)||(51013886-51013975)
chr4 (120-202)||(44794765-44794847)
chr4 (82-160)||(48645254-48645332)
chr4 (83-172)||(319273-319362)
chr4 (120-202)||(10372711-10372793)
chr4 (120-202)||(47941848-47941930)
chr4 (104-173)||(2691394-2691463)
chr4 (80-172)||(4169683-4169775)
chr4 (102-206)||(7149558-7149662)
chr4 (83-154)||(320918-320989)
chr4 (120-206)||(2350508-2350594)
chr4 (120-202)||(10762618-10762700)
chr4 (120-206)||(44558494-44558580)
chr4 (83-172)||(833223-833312)
chr4 (83-172)||(5439647-5439736)
chr4 (84-173)||(20819986-20820075)
chr4 (83-172)||(33266010-33266099)
chr4 (83-152)||(42982472-42982541)
chr4 (83-172)||(5437811-5437900)
chr4 (87-152)||(11254123-11254188)
chr4 (120-172)||(44792971-44793023)
chr4 (83-202)||(835012-835131)
chr4 (118-212)||(13450975-13451069)
chr4 (120-220)||(39083676-39083776)
chr4 (120-172)||(39923009-39923061)
chr4 (88-172)||(43521109-43521193)
chr4 (131-206)||(2827452-2827527)
chr4 (162-220)||(44972490-44972548)
chr4 (162-220)||(50131241-50131299)
chr4 (119-172)||(34460261-34460314)
chr4 (95-160)||(54387894-54387958)
chr4 (120-220)||(5484577-5484677)
chr4 (124-172)||(27626730-27626778)
chr4 (120-220)||(39921531-39921631)
chr4 (120-220)||(43779854-43779954)
chr4 (120-168)||(44992845-44992893)
chr4 (120-172)||(47942748-47942800)
[»] chr2 (54 HSPs)
chr2 (83-220)||(39664755-39664892)
chr2 (83-209)||(40560223-40560349)
chr2 (83-208)||(16763076-16763201)
chr2 (83-220)||(44709752-44709889)
chr2 (82-220)||(19908253-19908392)
chr2 (86-220)||(17696209-17696343)
chr2 (83-209)||(14389102-14389228)
chr2 (83-220)||(2766934-2767071)
chr2 (83-220)||(39455169-39455306)
chr2 (87-220)||(42519212-42519346)
chr2 (119-220)||(16377204-16377305)
chr2 (105-212)||(6797529-6797636)
chr2 (83-208)||(24208061-24208186)
chr2 (83-208)||(6786000-6786125)
chr2 (83-172)||(39663154-39663243)
chr2 (83-172)||(16376736-16376825)
chr2 (83-172)||(39456780-39456869)
chr2 (86-165)||(19906685-19906764)
chr2 (82-172)||(14387348-14387438)
chr2 (120-202)||(15372536-15372618)
chr2 (83-172)||(16764611-16764700)
chr2 (83-208)||(37020508-37020633)
chr2 (82-189)||(19581413-19581520)
chr2 (83-172)||(6783364-6783453)
chr2 (83-172)||(24205598-24205687)
chr2 (83-172)||(34400314-34400403)
chr2 (120-206)||(39593-39679)
chr2 (79-172)||(6799408-6799501)
chr2 (130-223)||(17946141-17946234)
chr2 (93-206)||(29909661-29909774)
chr2 (83-172)||(37022185-37022274)
chr2 (101-212)||(37645505-37645616)
chr2 (120-206)||(37417310-37417396)
chr2 (120-202)||(41706576-41706658)
chr2 (83-172)||(2577480-2577569)
chr2 (83-172)||(40561878-40561967)
chr2 (101-207)||(11315335-11315441)
chr2 (123-205)||(26584819-26584901)
chr2 (93-206)||(25619670-25619783)
chr2 (120-172)||(41144-41196)
chr2 (139-223)||(7744099-7744183)
chr2 (120-172)||(41708432-41708484)
chr2 (86-173)||(31475079-31475166)
chr2 (166-220)||(13999890-13999944)
chr2 (93-219)||(15432338-15432464)
chr2 (120-172)||(11021570-11021622)
chr2 (120-172)||(28248177-28248229)
chr2 (83-127)||(42517558-42517602)
chr2 (162-213)||(62814-62865)
chr2 (86-173)||(162074-162160)
chr2 (104-173)||(37646477-37646546)
chr2 (120-172)||(15373890-15373942)
chr2 (120-172)||(37418771-37418823)
chr2 (166-206)||(42879438-42879478)
[»] chr1 (63 HSPs)
chr1 (83-220)||(6818665-6818802)
chr1 (83-220)||(31238482-31238619)
chr1 (83-213)||(4855960-4856090)
chr1 (82-220)||(34778125-34778263)
chr1 (83-220)||(25278355-25278492)
chr1 (82-212)||(2869578-2869708)
chr1 (83-220)||(37344342-37344479)
chr1 (83-220)||(27087283-27087420)
chr1 (82-220)||(50556084-50556222)
chr1 (123-220)||(15104481-15104578)
chr1 (83-212)||(51896147-51896276)
chr1 (83-220)||(3013457-3013600)
chr1 (83-209)||(46583554-46583680)
chr1 (86-224)||(33602627-33602765)
chr1 (83-185)||(25278975-25279077)
chr1 (82-208)||(9121667-9121793)
chr1 (81-172)||(46582008-46582099)
chr1 (81-208)||(47013081-47013208)
chr1 (83-172)||(31236819-31236908)
chr1 (84-172)||(50554164-50554252)
chr1 (83-172)||(8169568-8169657)
chr1 (84-151)||(6816866-6816933)
chr1 (81-160)||(52641886-52641965)
chr1 (86-220)||(52643607-52643736)
chr1 (83-172)||(26223587-26223676)
chr1 (83-172)||(34776569-34776658)
chr1 (82-170)||(8167941-8168029)
chr1 (83-159)||(37088149-37088225)
chr1 (81-159)||(2871089-2871167)
chr1 (86-172)||(3011858-3011944)
chr1 (79-172)||(1444181-1444274)
chr1 (83-172)||(4854410-4854499)
chr1 (83-172)||(25276742-25276831)
chr1 (83-172)||(27089279-27089368)
chr1 (83-172)||(37345962-37346051)
chr1 (81-151)||(33599185-33599255)
chr1 (94-172)||(33599229-33599307)
chr1 (86-172)||(51894570-51894656)
chr1 (83-172)||(9120039-9120128)
chr1 (83-160)||(25278854-25278931)
chr1 (125-202)||(27940650-27940727)
chr1 (93-206)||(42134492-42134605)
chr1 (139-223)||(51121961-51122045)
chr1 (83-172)||(47011456-47011545)
chr1 (83-143)||(45044949-45045009)
chr1 (84-147)||(1442551-1442614)
chr1 (101-206)||(35479976-35480081)
chr1 (93-206)||(36895511-36895624)
chr1 (120-172)||(27952502-27952554)
chr1 (120-172)||(35478124-35478176)
chr1 (120-206)||(46638808-46638894)
chr1 (120-202)||(47269461-47269543)
chr1 (93-172)||(18180510-18180589)
chr1 (120-203)||(44157470-44157553)
chr1 (101-172)||(44159296-44159367)
chr1 (162-208)||(1442600-1442646)
chr1 (120-190)||(18183960-18184030)
chr1 (120-206)||(31801670-31801756)
chr1 (123-172)||(33679299-33679348)
chr1 (125-206)||(45380985-45381066)
chr1 (120-172)||(5784869-5784921)
chr1 (120-172)||(31803702-31803754)
chr1 (120-172)||(45379122-45379174)
[»] chr7 (65 HSPs)
chr7 (82-220)||(39859216-39859354)
chr7 (86-220)||(24228396-24228530)
chr7 (82-220)||(37115513-37115651)
chr7 (86-224)||(34776898-34777036)
chr7 (83-220)||(6602335-6602472)
chr7 (83-220)||(45359336-45359473)
chr7 (83-220)||(30940412-30940549)
chr7 (83-220)||(38474130-38474267)
chr7 (80-223)||(37796165-37796308)
chr7 (105-220)||(13168142-13168260)
chr7 (83-220)||(47386196-47386333)
chr7 (83-209)||(27666063-27666189)
chr7 (83-209)||(29996512-29996638)
chr7 (83-188)||(56330-56435)
chr7 (83-172)||(13169683-13169772)
chr7 (83-208)||(20478042-20478167)
chr7 (86-172)||(39857648-39857734)
chr7 (83-172)||(23904583-23904672)
chr7 (83-172)||(35403619-35403708)
chr7 (139-212)||(48852342-48852415)
chr7 (80-172)||(37113938-37114030)
chr7 (86-206)||(13018036-13018158)
chr7 (86-172)||(6605397-6605483)
chr7 (86-172)||(27664433-27664519)
chr7 (83-172)||(78014-78103)
chr7 (83-172)||(22155847-22155936)
chr7 (83-172)||(22211762-22211851)
chr7 (84-172)||(24226582-24226670)
chr7 (80-172)||(35401966-35402058)
chr7 (125-209)||(35693368-35693454)
chr7 (82-172)||(34774997-34775087)
chr7 (82-172)||(47384293-47384383)
chr7 (86-172)||(48227941-48228027)
chr7 (83-172)||(20479719-20479808)
chr7 (93-206)||(33038798-33038911)
chr7 (83-164)||(38549547-38549628)
chr7 (123-202)||(35344295-35344374)
chr7 (82-172)||(46437106-46437196)
chr7 (83-144)||(23906295-23906356)
chr7 (123-202)||(8423286-8423365)
chr7 (162-213)||(23906255-23906306)
chr7 (84-143)||(29994907-29994966)
chr7 (120-223)||(46996686-46996789)
chr7 (120-218)||(2167516-2167614)
chr7 (87-172)||(35691431-35691516)
chr7 (101-173)||(13039641-13039713)
chr7 (93-219)||(27955380-27955506)
chr7 (83-169)||(45361279-45361365)
chr7 (178-223)||(1546382-1546427)
chr7 (108-173)||(37791679-37791744)
chr7 (120-172)||(8421453-8421505)
chr7 (102-172)||(48311733-48311803)
chr7 (119-172)||(46810741-46810794)
chr7 (101-206)||(46812583-46812688)
chr7 (93-206)||(47341687-47341800)
chr7 (120-172)||(4321075-4321127)
chr7 (126-206)||(23953848-23953928)
chr7 (120-172)||(30108602-30108654)
chr7 (120-172)||(35342462-35342514)
chr7 (120-220)||(45463707-45463807)
chr7 (166-220)||(6056849-6056903)
chr7 (120-190)||(38613498-38613568)
chr7 (81-166)||(46439539-46439624)
chr7 (120-172)||(45465186-45465238)
chr7 (120-172)||(46994697-46994749)
[»] chr6 (40 HSPs)
chr6 (83-209)||(32439089-32439215)
chr6 (83-220)||(32516877-32517014)
chr6 (86-220)||(7372945-7373079)
chr6 (83-220)||(13613569-13613706)
chr6 (84-209)||(20523367-20523492)
chr6 (83-220)||(6899485-6899622)
chr6 (84-213)||(11355223-11355352)
chr6 (87-220)||(10568403-10568536)
chr6 (101-224)||(14338458-14338581)
chr6 (80-172)||(11357194-11357286)
chr6 (101-208)||(3456766-3456873)
chr6 (82-160)||(10569931-10570009)
chr6 (83-208)||(32455890-32456015)
chr6 (136-220)||(9398713-9398797)
chr6 (79-172)||(32518497-32518590)
chr6 (162-213)||(7049836-7049887)
chr6 (83-151)||(32437140-32437208)
chr6 (124-202)||(2968180-2968258)
chr6 (120-202)||(4641392-4641474)
chr6 (82-148)||(8605349-8605415)
chr6 (83-172)||(3480657-3480746)
chr6 (83-152)||(7371175-7371244)
chr6 (83-172)||(9400035-9400124)
chr6 (83-172)||(20525334-20525423)
chr6 (83-172)||(32454248-32454337)
chr6 (80-160)||(6902910-6902989)
chr6 (80-172)||(18645104-18645195)
chr6 (120-206)||(3018433-3018519)
chr6 (120-202)||(29077365-29077447)
chr6 (120-202)||(29112337-29112419)
chr6 (105-160)||(7051257-7051312)
chr6 (83-154)||(13610690-13610761)
chr6 (93-144)||(7049796-7049847)
chr6 (101-160)||(33276819-33276878)
chr6 (161-219)||(25172097-25172155)
chr6 (118-220)||(30891159-30891261)
chr6 (120-172)||(17950598-17950650)
chr6 (86-160)||(21068628-21068702)
chr6 (120-220)||(17952029-17952129)
chr6 (120-172)||(30639648-30639700)
[»] scaffold1454 (1 HSPs)
scaffold1454 (86-220)||(1266-1400)
[»] scaffold0058 (3 HSPs)
scaffold0058 (83-209)||(3294-3420)
scaffold0058 (83-209)||(4466-4592)
scaffold0058 (83-172)||(14343-14432)
[»] scaffold0564 (1 HSPs)
scaffold0564 (85-220)||(8264-8397)
[»] scaffold0345 (1 HSPs)
scaffold0345 (80-172)||(1555-1647)
[»] scaffold0477 (1 HSPs)
scaffold0477 (120-202)||(6639-6721)
[»] scaffold0081 (1 HSPs)
scaffold0081 (83-172)||(54258-54347)
[»] scaffold1712 (1 HSPs)
scaffold1712 (83-172)||(982-1071)
[»] scaffold0002 (1 HSPs)
scaffold0002 (93-159)||(436275-436341)


Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 2179705 - 2179924
Alignment:
Q  1 tctaaggtaaggcatatgttacacatacaaaaattgtggataaattatccaacaaccaacgagaaatagccacgtgagtaaagactaatacttcaaattt 100  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  2179705 tctaaggtaaggcatatgttacacataaaaaaattatggataaattatacaacaaccaacgagaaatagtcacgtgagtaaagactaatacctcaaattt 2179804  T
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2179805 gtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatggtccctcc 2179904  T
Q  201 gtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||    
T  2179905 gtccaaaagctccattagtg 2179924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 17574318 - 17574455
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtg 17574455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 36057737 - 36057607
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  183 catcaaaatggtccctccgtccaaaagctcc 213  Q
    |||||||||||||||||||||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctcc 36057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 7267843 - 7267980
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtg 7267980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 34327634 - 34327764
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| |||||||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  34327634 agactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgt 34327733  T
Q  182 ccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||||||||||||| ||||||||||||||||    
T  34327734 ccatcaaaatggtctctccgtccaaaagctc 34327764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 30468404 - 30468267
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    |||| |||| |||| || |||||||||||||||||||| || |||||||||| || |||||||| ||||||||||||| ||| |||||||||||||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtc 30468305  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30468304 catcaaaatggtccctccgtccaaaagctccgttagtg 30468267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 8539675 - 8539812
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| |||||||   ||||||||| | |||||||||| ||||||||||||| ||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||| ||| |||| |||||||||||| ||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagtg 8539812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 18625129 - 18624996
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||| |   ||| || ||||||||||||||||||||  ||||||||||||| |||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  186 caaaatggtccctccgtccaaaagctccattagt 219  Q
    ||||||||||| |||||||||||||||| |||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagt 18624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 2854452 - 2854317
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||| | ||| ||| | ||| |||||||||||||||||||    
T  2854452 aagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacg 2854354  T
Q  181 tccatcaaaatggtccctccgtccaaaagctccatta 217  Q
    |||| |||| | ||||||||||||||||| |||||||    
T  2854353 tccaacaaattcgtccctccgtccaaaaggtccatta 2854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 24541336 - 24541209
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  183 catcaaaatggtc-cctccgtccaaaag 209  Q
    ||||||| |  || ||||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaag 24541209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 12738825 - 12738736
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 12801648 - 12801559
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 29621909 - 29621780
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacaga 178  Q
    ||||||||||||| ||||| | ||| ||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||| ||||    
T  29621909 taaagactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaga 29621810  T
Q  179 cgtccatcaaaatggtccctccgtccaaaa 208  Q
    |||||||||||   ||||||||||||||||    
T  29621809 cgtccatcaaatcagtccctccgtccaaaa 29621780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 8541360 - 8541271
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 42473731 - 42473606
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||| | | ||||||| |  || |||||||||||||||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   |||| |||||||||||    
T  42473631 catcaaatcagtccttccgtccaaaa 42473606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 40780553 - 40780675
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  186 caaaatggtccctccgtccaaaa 208  Q
    ||||   ||||||||||||||||    
T  40780653 caaatcagtccctccgtccaaaa 40780675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 2852882 - 2852975
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| | ||| | |||||||||    
T  2852882 taaagactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 34328917 - 34328827
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||  ||| |||||||    
T  34328917 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 7269535 - 7269446
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| |||||||||||||||||||| || |||||||||||||||||| ||||||| | ||| |||||||||||    
T  7269535 gactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||||||| ||||||||| |||||||  |||||||||||  ||||||||| |||||||||||||| |||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 28813856 - 28813765
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaa--tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| |||||||||||| ||||||  | |||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 40782300 - 40782211
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 17578027 - 17577953
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatc 154  Q
    |||| ||||||| ||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  17578027 aaaggctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatc 17577953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 18728689 - 18728603
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||| ||||||||| |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| |||||||||||||||    
T  18728689 tcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 21843082 - 21842992
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| ||| || |||| |||||||||| ||||||| | ||| |||||||||||    
T  21843082 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 29620138 - 29620227
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| || ||||||||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttta 174  Q
    ||||||| || ||| |||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||| |||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 28822176 - 28822090
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| ||||||||||||| |||||| || |||||||||||||||||||||| ||||  ||||||  ||| |||||||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 35395370 - 35395456
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||| | |||||||||   ||||||||||||||| |||||||||||||||    
T  35395370 tcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 32087560 - 32087637
Alignment:
Q  129 ttcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    ||||||||| |||| ||| ||||||| | ||| ||||| |||||| |||||||||||||||| |||||||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    ||||||||| || ||||| |||| ||| ||||||| | ||| |||||||||||  ||||||||||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 42471547 - 42471607
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatt 142  Q
    |||||||||| ||||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  42471547 agactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatt 42471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 15459303 - 15459184
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||  ||  ||||| |||| |||||||  |||||  | ||||  ||||||  | ||||||||| |||||||||||||||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatg 15459204  T
Q  193 gtccctccgtccaaaagctc 212  Q
    |||||| |||||||| ||||    
T  15459203 gtcccttcgtccaaatgctc 15459184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 38596878 - 38596980
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||||||||||||||||| |||| ||| ||||||| | ||| |||||||||||   ||||||||||||||| |    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaag 38596977  T
Q  193 gtc 195  Q
    |||    
T  38596978 gtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 24496778 - 24496867
Alignment:
Q  118 aatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 207  Q
    |||||| |||||| |||||| |||| ||  ||||||| | |||||||||||||||   |||||| |||||||||||||| ||||||||||    
T  24496778 aatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgtccaaa 24496867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaat 170  Q
    |||||| |||| || ||||||||||||| ||||||| |||||||||||||   |||||||  ||||||||||||| ||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 38176671 - 38176721
Alignment:
Q  122 ggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  38176671 ggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 38176721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 38203895 - 38203945
Alignment:
Q  122 ggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  38203895 ggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 38203945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 28819391 - 28819428
Alignment:
Q  187 aaaatggtccctccgtccaaaagctccattagtgatga 224  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28819391 aaaatggtccctccgtccaaaagctccgttagtgatga 28819428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 33256410 - 33256523
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| |||| |||||||| | |  |||||||| ||| ||| | |||| ||| ||||||| | ||||||  |||||||  ||||||||||||||||      
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  33256510 gtccctccgtccaa 33256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 38178180 - 38178095
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtcca 205  Q
    |||| ||||||| ||||| |||| ||| ||||||| ||||| |  ||||||||  |||||||||||||||| ||||||| ||||||    
T  38178180 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38178095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 38205404 - 38205319
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtcca 205  Q
    |||| ||||||| ||||| |||| ||| ||||||| ||||| |  ||||||||  |||||||||||||||| ||||||| ||||||    
T  38205404 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 32089979 - 32089927
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  32089979 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 32089927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 32835913 - 32835965
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  32835913 tcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 33257814 - 33257762
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  33257814 tcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaattt 33257762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 35292467 - 35292371
Alignment:
Q  122 ggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattag 218  Q
    ||||||| || ||| | |||| ||| ||||||| | ||| |||||||||||  ||||||||||| |||| ||| |||||||||||| ||||| ||||    
T  35292467 ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgttag 35292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 40330569 - 40330517
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| |||||||| |||| ||| ||||||| |||||||||||||||||    
T  40330569 tcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaattt 40330517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 27077516 - 27077437
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||||||   |||||| |||||||||||||| ||||||||||||  || | ||| ||||||  |||||||||||    
T  27077516 gccaaattcgtcctcaaatttttcaaaatatctattttatccctgaatttaccaaatgtcaatcaaatcggtccctccgt 27077437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 27075858 - 27075939
Alignment:
Q  121 cggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||| || ||  |||||| ||||||||| | ||| | ||||||||| |||||||||||||||| |  |||||||||    
T  27075858 cggccaaatttgtaccacaatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaattcatccctccgt 27075939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 27349212 - 27349281
Alignment:
Q  139 aattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa 208  Q
    |||||||| ||||||| ||||  ||| |||||||  |  ||||| |||||||||||||||||||||||||    
T  27349212 aattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 53190904 - 53190766
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  53190904 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 53190805  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  53190804 ccatcaaaatggtccctccgtccaaaagctccgttagtg 53190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 21348723 - 21348852
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  183 catcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||||||||||||||||||||||||    
T  21348823 catcaaaatggtccctccgtccaaaagctc 21348852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 27899225 - 27899088
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||| ||||||||||||||||||||||||||| ||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtg 27899088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 54898437 - 54898575
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtga 221  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagtga 54898575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 2226296 - 2226171
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||||| |||||||||||||||    
T  2226196 catcaaaatgttccctccgtccaaaa 2226171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 51684610 - 51684747
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||  ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtg 51684747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 46112486 - 46112615
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||||||||||||||||    
T  46112486 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgt 46112585  T
Q  182 ccatcaaaatggtccctccgtccaaaagct 211  Q
    ||||||||||||||||||||| ||||||||    
T  46112586 ccatcaaaatggtccctccgttcaaaagct 46112615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 35905837 - 35905726
Alignment:
Q  102 tccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccg 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  35905837 tccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccg 35905738  T
Q  202 tccaaaagctcc 213  Q
    ||||||||||||    
T  35905737 tccaaaagctcc 35905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 41977750 - 41977878
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||| | ||| |||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  183 catcaaaatggtccctccgtccaaaagct 211  Q
    | |||||||||||||||||||||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagct 41977878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 30600062 - 30599933
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||| |||||| | |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  183 catcaaaatggtccctccgtccaaaagctc 212  Q
     |||||||||||||||||||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctc 30599933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 43765139 - 43765274
Alignment:
Q  85 ctaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcca 184  Q
    ||||||| ||||||| ||||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  185 tcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||| |||||||||||| ||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtg 43765274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 23293314 - 23293177
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||||| |||||||||  ||||||| |||||||||| || |||||||||| ||||||||||||| ||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtg 23293177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 17515309 - 17515435
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| |||||||  |||||||||||| |||||| |||||||||| || ||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  17515309 agactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 17515408  T
Q  182 ccatcaaaatggtccctccgtccaaaa 208  Q
    |||||||||||||||||| ||||||||    
T  17515409 ccatcaaaatggtccctctgtccaaaa 17515435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 42279510 - 42279636
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||| ||||||||| ||||||| ||  |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  186 caaaatggtccctccgtccaaaagctc 212  Q
    |||||||||||||||||||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctc 42279636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 2377032 - 2377166
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||  ||||||||| |||||| | ||||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||| |||||||| ||||||||| ||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtg 2377166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 46197750 - 46197861
Alignment:
Q  113 taaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||| ||    
T  46197750 taaaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttc 46197849  T
Q  213 cattagtgatga 224  Q
    | ||||||||||    
T  46197850 cgttagtgatga 46197861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 3152362 - 3152236
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||| ||||| |||||| ||||||||||||| ||| |||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||   |||||||||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaag 3152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 2660222 - 2660338
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |||||||| |||| |||||||||||||||||| ||||||| | ||| ||| |||||||||||||||||||||||| |     
T  2660222 tcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattc 2660321  T
Q  193 gtccctccgtccaaaag 209  Q
    |||||||||||||||||    
T  2660322 gtccctccgtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 23291566 - 23291659
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  23291566 taaagactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 44794208 - 44794333
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| |||| |||||||| ||| |||||||||||||| ||||||| | ||| |||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||| | |||||||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaag 44794333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 2379071 - 2378983
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| |||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaattt 2378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 611312 - 611222
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||  ||||||||||    
T  611312 agactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 38193600 - 38193510
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  38193600 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||| | ||| |||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 46308807 - 46308896
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 53094362 - 53094273
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 53187742 - 53187831
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 3150251 - 3150341
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  3150251 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 54900163 - 54900074
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||  |||||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 46310528 - 46310436
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  46310528 aaagactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 7884938 - 7884880
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  7884938 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtg 7884880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |  | |||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||  ||||||||||||||||      
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  193 gtccctc 199  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatttt 144  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 30598337 - 30598426
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||  ||| |||||||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 38191895 - 38191984
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| |||||| |||||| |||||| |||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 40509025 - 40508912
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||||||||||||||||| |||| ||| ||||||| | ||||||| |||||||  ||||||||||||||||      
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  40508925 gtccctccgtccaa 40508912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 44267981 - 44268070
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||  ||| |||||||    
T  44267981 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 53092623 - 53092712
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| || |||||| |||||| |||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 48830885 - 48830821
Alignment:
Q  148 aaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  48830885 aaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctc 48830821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| ||||||||||||| ||||||| | |||||||||  ||||||||||| ||||||||||||| ||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 46114195 - 46114117
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaa-tcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||| ||| |||||||| |||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctattta 46114117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 600725 - 600802
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| |||||||  ||||||||||||||||||||| ||||||| || | |||||||| |||||||||||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctattta 600802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| || ||||| |||||||||||| ||||||| | ||| ||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 46609149 - 46609238
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||  ||||||| || |||||||||| ||||||||||||| |||||||||||||||||  ||||||| | ||| |||||||||||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 46611392 - 46611303
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||  | ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 48633887 - 48634000
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||| ||||||||||| | |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| |    
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  48633987 gtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 51686483 - 51686406
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| ||||||| |||||| |||||| ||||||| ||||||||||||||| |||||||| |||||| ||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttattta 51686406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 19987692 - 19987612
Alignment:
Q  129 ttcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaag 209  Q
    |||||||||||||||||| ||||||| | ||| ||||| ||||||||| ||||||||||||   |||||||||||||||||    
T  19987692 ttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaag 19987612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 1847726 - 1847647
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||||||||||| |    |||||||||||| ||||| |||| ||||||||||| |||||||||||||||||    
T  1847726 tcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaattt 1847647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 44276266 - 44276211
Alignment:
Q  157 tttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctc 44276211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 54412626 - 54412547
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||| |||| ||||||||||||||| || ||||||||||| |||||||||| | ||||||||||| | |||||||||    
T  54412626 tcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 2977443 - 2977313
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |  |||||||||||||| ||||| |||| ||| ||||||| ||| | ||||| |||||  || ||||||||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  193 gtccctccgtccaaaagctccattagtgatg 223  Q
    |||| |||| ||||  ||||| |||| ||||    
T  2977343 gtccatccgcccaagtgctccgttagcgatg 2977313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 23888886 - 23888772
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| |||| |||||||| | |  |||||||| ||||||||| |||| ||| |||||||   ||| |||||||||||  || ||||||||||||| |    
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  193 gtccctccgtccaaa 207  Q
    |||||||||||||||    
T  23888786 gtccctccgtccaaa 23888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 41021090 - 41021008
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| ||| |||| || |||| ||||||||||||  |||||||||||||||| |||||||||||    
T  41021090 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 48829356 - 48829433
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| ||||||| ||||||||||||| |||| || ||||||||  | |||||||||||| |||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctattta 48829433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  88 atacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||| ||||||| | ||| ||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 33113294 - 33113184
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    ||||||||| || ||||| |||| ||| ||||||| | ||| ||||| |||||  |||||||||||||||| |    
T  33113294 tcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaag 33113195  T
Q  193 gtccctccgtc 203  Q
    |||||||||||    
T  33113194 gtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 7883328 - 7883417
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| |||| || ||| ||||||||| ||||||||||||| ||||||||| |||||||  ||||||| | ||| | |||||||||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 17517054 - 17516993
Alignment:
Q  91 cttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaata 152  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||| | |||||||||| |||||    
T  17517054 cttcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaata 17516993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 18430385 - 18430272
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| |||||||||||||||    || ||||||||| ||||| |||| ||| ||||||| | ||| ||||||||| |  ||||||||||  |||| |    
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  18430285 gtccctccgtccaa 18430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 28626411 - 28626500
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||| | | ||||||| |  || |||||||||||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 35572610 - 35572525
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatt 171  Q
    |||||||| ||||| |||||||||||||||||||| |   ||||| || ||||||||||| |||||| ||||||| ||| ||||||    
T  35572610 taatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 45898462 - 45898349
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| |||| |||||||| | |  ||| |||| || ||||||||||| ||| ||||||| | ||| ||| |||||||  |||||||| ||||||| |    
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  45898362 gtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 21350700 - 21350605
Alignment:
Q  77 agtaaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| |||||||||| |||||||  ||| ||| ||||  ||||||||||||||||||  ||||||||||| ||||| ||||||  ||| |||||||    
T  21350700 agtatagactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaattt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 33852782 - 33852671
Alignment:
Q  95 aaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggt 194  Q
    ||||||||||||||||||| |    | || ||||||  ||||| |||| ||| ||||||| |||||||  ||||||||  |||||||||||||||| |||    
T  33852782 aaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggt 33852683  T
Q  195 ccctccgtccaa 206  Q
    ||||| ||||||    
T  33852682 ccctctgtccaa 33852671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 45257307 - 45257208
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||| ||||| |||| || |||||||| | ||| | |||||||||  ||||||||||| ||||  ||||||||||||||  ||||| |||||    
T  45257307 tcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtccataaaaaatgtccctccgtccaagtgctccgttagt 45257208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 600805 - 600846
Alignment:
Q  179 cgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  600805 cgtccatcaaaatggtccctccgtctaaaagctccgttagtg 600846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 24383007 - 24382894
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||||||||||| ||| | |||| ||  ||||||| | ||| ||| || ||||  |||||||||||||||| |    
T  24383007 tcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgtccatcaaaaag 24382908  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  24382907 gtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 31887566 - 31887453
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |   ||||| |||||||  || | |||| ||| ||||||| | ||| |||||||||||  |||| ||| ||||||| |    
T  31887566 tcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaag 31887467  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  31887466 gtccctccgtccaa 31887453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 48635428 - 48635375
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  48635428 atcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 45897087 - 45897139
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  45897087 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 45897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 1845840 - 1845907
Alignment:
Q  139 aattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||| ||||||||||| | ||| ||  ||||||| |||||||||||||||||  ||||||||||||||    
T  1845840 aattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgtccaa 1845907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 5133079 - 5133133
Alignment:
Q  166 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  5133079 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 5133133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 54092765 - 54092815
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||| ||||    
T  54092765 tccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctc 54092815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 27897151 - 27897216
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaa 148  Q
    ||||||||| |||||||  | ||| ||||||||||||| |  ||||||||||| ||||||||||||    
T  27897151 gactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgcaa 27897216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 23887235 - 23887287
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| || ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  23887235 tcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 23887287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 33051515 - 33051467
Alignment:
Q  124 ccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| |||||||| |||||||||||||||| ||||  |||||||||||    
T  33051515 ccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaattt 33051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 33111878 - 33111930
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||| ||||| |||| ||| ||||||| |||||||||||||||||    
T  33111878 tcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaattt 33111930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 40508530 - 40508582
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||||||||| |||| ||| |||| || |||||||||||||||||    
T  40508530 tcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaattt 40508582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 13282476 - 13282615
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  13282476 aagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacg 13282575  T
Q  181 tccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  13282576 tccatcaaaatggtccctccgtccaaaagctccgttagtg 13282615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 8609931 - 8609794
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtg 8609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 13486243 - 13486107
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||||| |||||||||| ||||||||| || ||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagt 219  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagt 13486107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 13108480 - 13108343
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||  ||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtg 13108343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 38547228 - 38547365
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| | ||| |||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtg 38547365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 41042728 - 41042591
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| | ||||  |||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtg 41042591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 26242455 - 26242321
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| |||| || || |||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||| ||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtg 26242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 42941777 - 42941911
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||| ||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||| |||||||||||||||| |||| ||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtg 42941911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 7745257 - 7745119
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||  ||||||| ||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||| |||||| |||||| ||||||||||| |    
T  7745257 agactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacat 7745158  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  7745157 ccatcaaaatggtccctccatccaaaagctccgttagtg 7745119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 27691154 - 27691280
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||   |||||||||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaag 27691280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 41825785 - 41825659
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  186 caaaatggtccctccgtccaaaagctc 212  Q
    |||||||||| ||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctc 41825659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 22272334 - 22272473
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaa--tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    ||||||||| ||||||| ||| |||||||||||||||  || | ||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  181 tccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||| |||||||| |||||||||||| ||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtg 22272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 5036446 - 5036569
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcc 183  Q
    |||||||| ||||||| |||||| |||||||||||||| | |||||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  184 atcaaaatggtccctccgtccaaa 207  Q
    |||||||||||| |||||||||||    
T  5036546 atcaaaatggtctctccgtccaaa 5036569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 9673266 - 9673172
Alignment:
Q  126 aaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtg 9673172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 22273981 - 22273891
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  22273981 agactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 42943515 - 42943426
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 33708947 - 33708822
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||  |||||||||||||||||| ||| ||| |||||||||||||||||| ||||||  | ||| ||||||||||||||| |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||   |||||||||||||||||    
T  33708848 catcaaatctgtccctccgtccaaaag 33708822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 27692926 - 27692837
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 34681155 - 34681078
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctattta 34681078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 38548920 - 38548831
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 601797 - 601704
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  601797 taaagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 26238726 - 26238803
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctattta 26238803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 33762802 - 33762713
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  33762802 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 35509214 - 35509303
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 29239277 - 29239187
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||| | ||||||| | ||| |||||||||||    
T  29239277 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||||||||| | |||| ||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 5038150 - 5038062
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| | |||||||||| ||||| ||||||| |||||||||||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | ||| |||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 27407041 - 27406916
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| |||||| |||||| ||||||| |||||| | | ||||||  |  || |||||||||||||||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||| ||||||||||||    
T  27406941 catcaaatcagtctctccgtccaaaa 27406916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 33761069 - 33761158
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 15305806 - 15305922
Alignment:
Q  92 ttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaat 191  Q
    |||||| | ||||||||||||| |||||| || ||| || ||||||||||| |   ||||||| | ||| ||||||||||||||||||||||||||||      
T  15305806 ttcaaaatagtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 15305905  T
Q  192 ggtccctccgtccaaaa 208  Q
     ||||||||||||||||    
T  15305906 agtccctccgtccaaaa 15305922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 15486175 - 15486291
Alignment:
Q  92 ttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaat 191  Q
    |||||| | ||||||||||||| |||||| || ||| || ||||||||||| |   ||||||| | ||| ||||||||||||||||||||||||||||      
T  15486175 ttcaaaatagtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 15486274  T
Q  192 ggtccctccgtccaaaa 208  Q
     ||||||||||||||||    
T  15486275 agtccctccgtccaaaa 15486291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 40339759 - 40339688
Alignment:
Q  148 aaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||||||| | |||||||||||| |||||    
T  40339759 aaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagt 40339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 13484543 - 13484613
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaat 151  Q
    ||||||||| | ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  13484543 aagactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 3151969 - 3152046
Alignment:
Q  95 aaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| |||| ||||||| ||||||| ||||| |||||    
T  3151969 aaatttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaattt 3152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||| | | ||||||| | ||| |||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||| | | ||||||| | ||| |||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 35510908 - 35510819
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||  ||||||| | ||| |||||||||||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 41040720 - 41040809
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||||||| ||||||||| |||||||||| ||||||||  ||||||||| ||||||| ||||||  ||| |||||||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaattt 41040809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 8608237 - 8608327
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctg-aattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| | ||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||| ||||||| | ||| |||||||||||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 13284073 - 13283995
Alignment:
Q  94 caaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||||||||| ||||||||||||| || ||||||||||||||| ||||||| | ||| ||| |||||||    
T  13284073 caaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 41823889 - 41823967
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    |||||||||| | ||||| ||||||||||||| ||||||| || || ||||||| |||||||||| |||||||||||||    
T  41823889 agactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctattta 41823967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 42897861 - 42897775
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||||||||||||| |||| ||  ||||||| | ||| ||| |||||||  |||||||||||||||| |||||||||||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 31821428 - 31821541
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| |||| |||||||| | |  |||| ||| ||||||||| |||| ||| ||||||| | ||| |||| ||||||  |||||||||||||||| |    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  31821528 gtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 43262226 - 43262149
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| ||||||| |||||| |||||| ||||||| || ||||||| |||| |||||||| |||||||||||||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctattta 43262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 9184401 - 9184520
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||  |  ||||||||||||||||| |  || |  || ||||||| | ||| |||||||||||  |||||||| ||| |||||||||||||    
T  9184401 gtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctcc 9184500  T
Q  201 gtccaaaagctccattagtg 220  Q
    ||||||| ||| ||||||||    
T  9184501 gtccaaatgcttcattagtg 9184520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 27404206 - 27404269
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatt 142  Q
    |||||| |||||| ||||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  27404206 taaagattaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatt 27404269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 33750472 - 33750385
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    ||||||||| ||||||||| |||| ||| ||||||| | ||| |||||||||||  ||||| | |||||||| |||||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 8654537 - 8654622
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||| ||||||||| ||| |||| ||| ||||||| ||||||| | |||||||  |||||||||||||||| |||||||||||||||    
T  8654537 tcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaa 8654622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 1320627 - 1320740
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    |||||||||||||| |||||| |    ||||| |||||| ||||| |||| ||||||||||| | ||| |||||||||||  ||||||||||| || | |    
T  1320627 tcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtccataaataag 1320726  T
Q  193 gtccctccgtccaa 206  Q
    |||| |||||||||    
T  1320727 gtccttccgtccaa 1320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 32822379 - 32822484
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| |   ||||||||||||| ||||| |||| |  |||||||| | ||| |||||||||||  |||| ||||||||||| ||||| |||    
T  32822379 gtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaaaaggtccttcc 32822478  T
Q  201 gtccaa 206  Q
    ||||||    
T  32822479 gtccaa 32822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 37526137 - 37526024
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||| ||||||| | | | |||| ||| ||||||| | ||| |||||||||||| ||||| |||||||||| |    
T  37526137 tcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaag 37526038  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  37526037 gtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 38882911 - 38882798
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |   ||||| ||||||| ||| | || | ||| | ||||| |||||||||||||||||  ||||||||||| ||||      
T  38882911 tcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaat 38882812  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  38882811 gtccctccgtccaa 38882798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 600760 - 600819
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatt 142  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||    
T  600760 gactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 33160262 - 33160155
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| | |  |||||||||||| ||||| |||| ||  ||||||| | ||| || ||||||||  |||||| ||||||||| |    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaaaag 33160163  T
Q  193 gtccctcc 200  Q
    ||||||||    
T  33160162 gtccctcc 33160155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| | ||||| ||||||||||||| |  ||||   ||||||||||| |||||||||| ||||||||||||| |||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 462484 - 462371
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||| ||||||||| | | ||||||||||||| ||| | |||| ||| ||||||| | ||| ||| |||||||  || ||||||||||||| |    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaaag 462385  T
Q  193 gtccctccgtccaa 206  Q
     ||||||| |||||    
T  462384 atccctccatccaa 462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 31199522 - 31199574
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||  ||||||| |||||||||||||||||    
T  31199522 tcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaattt 31199574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 40019193 - 40019245
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  40019193 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 40019245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 42894817 - 42894865
Alignment:
Q  124 ccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  42894817 ccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 42894865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 1322359 - 1322316
Alignment:
Q  129 ttcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||    
T  1322359 ttcgtccctcaattatgcaaaatatcaatttaatccctgaattt 1322316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 25707356 - 25707303
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| ||||| |||| ||| ||||||| | |||||||||||||||    
T  25707356 atcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaattt 25707303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 24526933 - 24526985
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||  ||||||| |||||||||||||||||    
T  24526933 tcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaattt 24526985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 28433822 - 28433714
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    |||| |||||||| ||  ||||||||||||||||||| |||||  | ||||||| |  || |||||||||||    |||||||||| |  | ||||||||    
T  28433822 gtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttcgtccctcc 28433723  T
Q  201 gtccaaaag 209  Q
    |||||||||    
T  28433722 gtccaaaag 28433714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 31823530 - 31823478
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||||||||| |||||    
T  31823530 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaattt 31823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 32824325 - 32824273
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||| |||||| |||| ||| ||||||| |||||||| ||||||||    
T  32824325 tcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaattt 32824273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 41781539 - 41781680
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||| ||    
T  41781539 gactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatc 41781638  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtgatga 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  41781639 catcaaaatggtccctccgtccaaaagctccgttagtgatga 41781680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 41761867 - 41761733
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||| | ||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtg 41761733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 208
Target Start/End: Original strand, 49523125 - 49523249
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcc 183  Q
    |||||||| ||||||| ||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  184 atcaaaatggtccctccgtccaaaa 208  Q
    |||||||||||||||||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaa 49523249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 51011924 - 51012055
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    ||||||||||  ||||||| ||||||||||||||||||||||| ||||||| | | |||||||||| ||||||||||||| || ||||||||||||||||    
T  51011924 aagactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacg 51012023  T
Q  181 tccatcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||||||||||||||||||||||||||    
T  51012024 tccatcaaaatggtccctccgtccaaaagctc 51012055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 35404569 - 35404432
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||| |||  | ||||||||||||||||||||| |||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    || ||||||||||| |||||||||||||||| ||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtg 35404432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 48813787 - 48813916
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||  ||||||||||||||||||||| |||||| | ||||||||||| |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  183 catcaaaatggtccctccgtccaaaagctc 212  Q
    |||||||||||||||| |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctc 48813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 43519424 - 43519558
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| ||||||||||||||| |||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 43519523  T
Q  183 catcaaaatggtccctccgtccaaaagctccatta 217  Q
    |||||||   ||||||||||||||||| |||||||    
T  43519524 catcaaatccgtccctccgtccaaaaggtccatta 43519558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 42980629 - 42980764
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcg------gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttaca 176  Q
    |||||||||||||||| |||||||||||||| ||||| ||      |||||||| |||| |||||||| | |||| |||||||| ||||| |||||||||    
T  42980629 gactaatacttcaaatgtgtccttgaatttttaaaaaacgaccaaggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttaca 42980728  T
Q  177 gacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||||||||||||||||||||||||||||||    
T  42980729 gacgtccatcaaaatggtccctccgtccaaaagctc 42980764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 49524822 - 49524733
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 39345567 - 39345653
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  39345567 taatatttcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 48646852 - 48646734
Alignment:
Q  102 tccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccg 201  Q
    |||||||||||| |||| || || |||||||||| ||||||| || ||||||||||||| |||||||||||||||||| | |||||||||||||| ||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  202 tccaaaagctccattagtg 220  Q
    |||||||||| | ||||||    
T  48646752 tccaaaagcttcgttagtg 48646734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 52868254 - 52868136
Alignment:
Q  102 tccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccg 201  Q
    |||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||| || |||||||| ||||||| | |||||||||||| || ||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcg 52868155  T
Q  202 tccaaaagctccattagtg 220  Q
    |||||||||||| ||||||    
T  52868154 tccaaaagctccgttagtg 52868136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 35401749 - 35401838
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| |||||||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 2693379 - 2693236
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagac 179  Q
    ||||| |||||| |||| || ||| ||||||||||||||||| ||||||||  | ||| |||||||| ||||||||||||| ||  ||||||||| | |     
T  2693379 aaagagtaatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta-aaat 2693281  T
Q  180 gtccatcaaaatggtccctccgtccaaaagctccattagtgatga 224  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||    
T  2693280 gtccatcaaaatggtccatccgtccataagttccattagtgatga 2693236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 35996100 - 35996186
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||| ||||||||||||| |||| ||||||||||| |||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 4173829 - 4173740
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 11601674 - 11601810
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| | ||||| || |||||||||| ||||||| | ||||||  ||||  ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccat 11601772  T
Q  186 caaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||| ||||||| ||||| ||||| | |||||||||    
T  11601773 caaaatagtccctctgtccacaagcttcgttagtgatg 11601810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 43507167 - 43507256
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 43508742 - 43508653
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 20493827 - 20493916
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||| | |||||||||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 33264382 - 33264471
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| | ||| | |||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 51013975 - 51013886
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| | | | |||||||||||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 44794847 - 44794765
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  44794847 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 48645254 - 48645332
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    |||||||||| ||||||| ||||||||||||| ||||||| | ||||||||||| |||||||||| |||||||||||||    
T  48645254 agactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctattta 48645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 319273 - 319362
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| | |||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 10372793 - 10372711
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| ||| ||||||| |||| ||||||||||||  |||||||||||||||| |||||||||||    
T  10372793 tcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 47941848 - 47941930
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||| |||||||||| || |||| ||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 2691394 - 2691463
Alignment:
Q  104 cttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    |||||||||| ||||||| |||||||||||||   |||||||||||||||||||||| ||||||||||||    
T  2691394 cttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 4169683 - 4169775
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| ||||||||||||| |||||| |  ||| |||||| ||||||||||| ||||||| | ||| |||||||||||    
T  4169683 aaagactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 7149558 - 7149662
Alignment:
Q  102 tccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccg 201  Q
    |||||||||||| ||||||| ||| ||||| ||  | |||||||| |||||| ||||| |||| ||||||| ||| | ||| ||||||||||||||||||    
T  7149558 tccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaatcaaaatggtccctccg 7149657  T
Q  202 tccaa 206  Q
    |||||    
T  7149658 tccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 320989 - 320918
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatc 154  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| ||| ||| |||||||||| |||||||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatc 320918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 2350594 - 2350508
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    ||||||||||| |||||| |||| ||| ||||||| |||||||| ||||||||  ||||||| |||||||| |||||||| ||||||    
T  2350594 tcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaaaggtccctctgtccaa 2350508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 10762618 - 10762700
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| ||| |||| || |||| ||||||||||||  |||||||||||||||| |||||||||||    
T  10762618 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 44558580 - 44558494
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||||||| ||||| |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| ||||| |||||||||    
T  44558580 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 833223 - 833312
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||| | | ||||||| |  || |||||||||||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 5439736 - 5439647
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||| | | ||||||| |  || |||||||||||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 20819986 - 20820075
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    |||||||| |||| || ||||||||||||| ||||||| | ||||||  | ||| ||||||||||||||| |||||| ||||||||||||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 33266099 - 33266010
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||  ||||||| || |||||||||| |||||||||| || ||||| |||||||||||| ||||||| | ||| |||||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 42982541 - 42982472
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaata 152  Q
    ||||||||| | |||||| |||||||||||| ||||||| | |||||||||||||||||||||| |||||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaata 42982472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 5437811 - 5437900
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| |||||||||| || |||||||||||||| | | ||||||| |  || |||||||||||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 11254123 - 11254188
Alignment:
Q  87 aatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaata 152  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||| |||| || |||||||| |||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaata 11254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 44792971 - 44793023
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  44792971 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| |||||||| |||| || ||||||||||| | | ||||||| |  || |||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  183 catcaaaatggtccctccgt 202  Q
     |||||| | ||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 13451069 - 13450975
Alignment:
Q  118 aatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||| ||||||||||||||  |||||  | ||||||| |  || ||| |||||||  |||||||||||||||||||||||||| |||||| ||||    
T  13451069 aatcagccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctc 13450975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39083676 - 39083776
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||| |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T
Q  220 g 220  Q
    |    
T  39083776 g 39083776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 39923061 - 39923009
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  39923061 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  88 atacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| |||||||||| |||||||||| ||||||| | ||| |||||   |||||||||| ||||||| | ||| |||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 2827452 - 2827527
Alignment:
Q  131 cgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    ||||||| |||| ||  ||||||| | ||| ||| |||||||  |||||||||||||||| |||||||||||||||    
T  2827452 cgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 44972490 - 44972548
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||| ||||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  44972490 tccctaaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 44972548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 50131241 - 50131299
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||| ||| |||||||||||||| |||  |||||||||| |||||| |||||    
T  50131241 tccctgaatttgacaaacgtccatcaaaatagtcattccgtccaaatgctccagtagtg 50131299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 34460261 - 34460314
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| |||||||||| || |||| ||||||||||| ||||||||||| |||||    
T  34460261 atcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaattt 34460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 54387958 - 54387894
Alignment:
Q  95 aaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||| |||||| |||||| ||||||| |||||||| || ||| |||||||| |||||||||||||    
T  54387958 aaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctattta 54387894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 5484577 - 5484677
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||  |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T
Q  220 g 220  Q
    |    
T  5484677 g 5484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 27626778 - 27626730
Alignment:
Q  124 ccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||| |||| |||||| ||| ||||||| |||||||||||||||||    
T  27626778 ccaaattagtccatgaattatgcgaaatatcaatttaatccctgaattt 27626730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39921531 - 39921631
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||  |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T
Q  220 g 220  Q
    |    
T  39921631 g 39921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 43779954 - 43779854
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||  |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T
Q  220 g 220  Q
    |    
T  43779854 g 43779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 44992845 - 44992893
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctga 168  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||    
T  44992845 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctga 44992893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 47942800 - 47942748
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||||||| |||||||    
T  47942800 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 47942748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 39664892 - 39664755
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  39664892 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtc 39664793  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39664792 catcaaaatggtccctccgtccaaaagctccgttagtg 39664755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 40560223 - 40560349
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||||| |||||||||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaag 40560349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 16763076 - 16763201
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    ||||||||||||||||||||||||||    
T  16763176 catcaaaatggtccctccgtccaaaa 16763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 44709889 - 44709752
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtg 44709752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 19908392 - 19908253
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaa-tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  19908392 agactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacg 19908293  T
Q  181 tccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||| ||||||||||||||||||||||||||||| ||||||    
T  19908292 tccgtcaaaatggtccctccgtccaaaagctccgttagtg 19908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 17696209 - 17696343
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||| ||||||||||||||||| ||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtg 17696343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 14389228 - 14389102
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||||||||||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaag 14389102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 2766934 - 2767071
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||  ||||||| ||||||||||||| ||||||||| |||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  2766934 gactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 2767033  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
     |||||||||||||||| ||||||||||||| ||||||    
T  2767034 tatcaaaatggtccctctgtccaaaagctccgttagtg 2767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 39455169 - 39455306
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||  |||||||||||||||||||||||||||||||  ||||||   |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||| |||||| |||||||||| ||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtg 39455306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 42519346 - 42519212
Alignment:
Q  87 aatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatttt-gcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    ||||| ||||||| |||||||||||||||||||| |  |||||| |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||| |||||||||||| ||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtg 42519212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 16377305 - 16377204
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattag 218  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  219 tg 220  Q
    ||    
T  16377205 tg 16377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 6797529 - 6797636
Alignment:
Q  105 ttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtcc 204  Q
    |||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||    
T  6797529 ttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtcc 6797628  T
Q  205 aaaagctc 212  Q
    ||||||||    
T  6797629 aaaagctc 6797636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| |  |||||||||||| ||||||||||||| |||||||||||||| | | ||||||| | ||| |||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||||||||||||||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 6786125 - 6786000
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| ||||||||| |||| |   ||||||| | ||| |||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||||||||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 39663154 - 39663243
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| | ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 16376736 - 16376825
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||| |||||||||||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 39456869 - 39456780
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||  ||||||||||||||||||| ||  |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 19906685 - 19906764
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccc 165  Q
    |||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 14387348 - 14387438
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  14387348 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 15372536 - 15372618
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||||| |||| |||| ||||||||||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  15372536 tcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 16764700 - 16764611
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 37020508 - 37020633
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| || |||| ||||||||   ||||||| | ||| |||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||||||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaa 37020633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 19581413 - 19581520
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| |||||| |||||| ||||||| |||||||| ||||||||||||||| ||||||||||||| |||  ||||||  || | ||    
T  19581413 agactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgt 19581512  T
Q  182 ccatcaaa 189  Q
    ||||||||    
T  19581513 ccatcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||||||||||||| ||| |||||||||||||| | ||||||||| | ||| |||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 24205598 - 24205687
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 34400314 - 34400403
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| |||||||  |||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||  ||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 39593 - 39679
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||  ||| |||| || |||| |||||||||||||||    
T  39593 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctccgtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 6799501 - 6799408
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| |||||  ||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||| ||||||  ||| |||||||    
T  6799501 taaagattaatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 17946141 - 17946234
Alignment:
Q  130 tcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||| | |||||||||||||||| ||||  |||||||||||  |  | |||||||||||||||||||||||||||||| ||| |||||||||    
T  17946141 tcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatg 17946234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 29909774 - 29909661
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| ||| ||||||| ||||| ||||| |||||  |||||||||||||||| |    
T  29909774 tcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaag 29909675  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  29909674 gtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 37022274 - 37022185
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| |||||||| |||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 37645505 - 37645616
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| ||||||| | | ||||||||| | ||||||   ||||||||||||| ||| |||||||| |||| ||  |||||||| ||||||||    
T  37645505 gtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttatcaaaattgtccctcc 37645604  T
Q  201 gtccaaaagctc 212  Q
    ||||| ||||||    
T  37645605 gtccataagctc 37645616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 37417310 - 37417396
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||||||| ||||| |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| ||||||| |||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 37417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 41706576 - 41706658
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||  |  ||||||||||||| |||||||||||    
T  41706576 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 2577569 - 2577480
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| |||||||| |||| ||||||||||||||||   ||||||| | ||| |||||||||||    
T  2577569 gactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 40561967 - 40561878
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||  ||||| | | ||| |||||||||||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 11315441 - 11315335
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    |||||| |||||| |  |||||||||||||||| ||  |||||  | ||||||| |  || | |||||||||  ||||||||||||||||||||||||||    
T  11315441 gtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatggtccctcc 11315342  T
Q  201 gtccaaa 207  Q
    |||||||    
T  11315341 gtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 26584901 - 26584819
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtcca 205  Q
    ||||||||||||||| || ||| ||||||||| | ||||||||| ||||| | |||||||||||||| |  ||||||||||||    
T  26584901 gccaaattcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtcca 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 25619670 - 25619783
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||| ||||||| ||||| |||| ||||||||||| | ||| |||||||||||  || | ||||||||||| |    
T  25619670 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaag 25619769  T
Q  193 gtccctccgtccaa 206  Q
    |||||||| |||||    
T  25619770 gtccctccatccaa 25619783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 41196 - 41144
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  41196 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 7744099 - 7744183
Alignment:
Q  139 aattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||||| ||||||| ||||  |||||||||||  |  | ||||||||||||||||||||| |||||||| ||| |||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtgatg 7744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 41708484 - 41708432
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  41708484 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 31475166 - 31475079
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    |||||| |||| || || ||| |||||| ||||||| | |||||||||| |  |||||||  ||||||||||||||||||||||||||    
T  31475166 taatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 13999890 - 13999944
Alignment:
Q  166 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  13999890 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccattagtg 13999944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 15432338 - 15432464
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    |||||||| |||||||||||| |    |||| ||||||| ||||| |||| ||| ||||||| ||||| || ||||||||  |||||||||||||||| |    
T  15432338 tcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaaag 15432437  T
Q  193 gtccctccgtccaaaagctccattagt 219  Q
    || | | |||||||  |||| ||||||    
T  15432438 gttcattcgtccaagtgctctattagt 15432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 11021570 - 11021622
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  11021570 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 11021622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 28248229 - 28248177
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  28248229 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 28248177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 42517558 - 42517602
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaa 127  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggccaa 42517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 62865 - 62814
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 213  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||| |||||    
T  62865 tccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctcc 62814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 162160 - 162074
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    ||||||||||| || ||| ||||||||| ||||||| | |||||||| |||  |||||| ||||||||||||||| | | ||||||||    
T  162160 taatacttcaatttcgtc-ttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaatttt 162074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 37646546 - 37646477
Alignment:
Q  104 cttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    |||||| ||| ||||||| | |||||||||||   |||| ||| ||||||||||||| ||||||||||||    
T  37646546 cttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 15373942 - 15373890
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||| ||| |||| ||| ||||||| ||||||| |||||||||    
T  15373942 tcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaattt 15373890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 37418823 - 37418771
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||| | |||| ||||||||||| || |||||||| |||||    
T  37418823 tcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaattt 37418771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 42879438 - 42879478
Alignment:
Q  166 tgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  42879438 tgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42879478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 6818802 - 6818665
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtg 6818665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 31238619 - 31238482
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||| || ||||||||||||| ||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtg 31238482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 4856090 - 4855960
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  183 catcaaaatggtccctccgtccaaaagctcc 213  Q
    |||||||||||||||||||||||||||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctcc 4855960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 34778263 - 34778125
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||| ||||||||||||||||| ||    
T  34778263 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgt 34778164  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  34778163 ccatcaaaatggtccctccgtccaaaagctccgttagtg 34778125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 25278492 - 25278355
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtg 25278355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 2869578 - 2869708
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| || || ||||||||||||||    
T  2869578 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgt 2869677  T
Q  182 ccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||||||||||||||||||||||||||||||    
T  2869678 ccatcaaaatggtccctccgtccaaaagctc 2869708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 37344342 - 37344479
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||  ||||||||||| |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtg 37344479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 27087283 - 27087420
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 27087382  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||| || |||||||||||||||| ||||||    
T  27087383 catcaaaatggcccatccgtccaaaagctccgttagtg 27087420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 50556222 - 50556084
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||  ||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  50556222 agactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgt 50556123  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    | |||||||||||||||||||||||||||||| ||||||    
T  50556122 ctatcaaaatggtccctccgtccaaaagctccgttagtg 50556084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 15104481 - 15104578
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15104481 gccaaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtg 15104578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 51896276 - 51896147
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    |||| |||| ||||||  |||||| |||||||||||||| | |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtc 51896177  T
Q  183 catcaaaatggtccctccgtccaaaagctc 212  Q
    ||||||||| ||||||||||||||||||||    
T  51896176 catcaaaatagtccctccgtccaaaagctc 51896147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 3013600 - 3013457
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||| ||| | ||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  183 ------catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
          ||||||||| ||||||||||||||||||||| ||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtg 3013457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 46583680 - 46583554
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| || ||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||| | |||||||||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaag 46583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 33602765 - 33602627
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||  ||||||| | ||| |||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  186 caaaatggtccctccgtccaaaagctccattagtgatga 224  Q
    |||| | ||||||||||||||||| ||| ||||| ||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatga 33602627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 25279077 - 25278975
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  25279077 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtc 25278978  T
Q  183 cat 185  Q
    |||    
T  25278977 cat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 9121793 - 9121667
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||| | ||||||||||||| ||||||||||||| ||||||||| |||||| | ||||||| | ||| |||||||||||| |||||||    
T  9121793 agactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgt 9121694  T
Q  182 ccatcaaaatggtccctccgtccaaaa 208  Q
    ||||||||   ||||||||||||||||    
T  9121693 ccatcaaatcagtccctccgtccaaaa 9121667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 46582008 - 46582099
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  46582008 aagactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 47013208 - 47013081
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacg 180  Q
    ||||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||| || |||    
T  47013208 aagactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacg 47013109  T
Q  181 tccatcaaaatggtccctccgtccaaaa 208  Q
    |||||||||   ||||||||||||||||    
T  47013108 tccatcaaatcagtccctccgtccaaaa 47013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 31236819 - 31236908
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| | |||||||||    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| | |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 8169657 - 8169568
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| | ||| |||||||||||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 6816866 - 6816933
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaat 151  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 52641886 - 52641965
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||| ||||||    
T  52641886 aagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatattta 52641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 52643736 - 52643607
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| |||||| |||||| ||||||| |  ||||||||||||||||||||| |||||| |||||| ||||||||||||| | |||||       
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgtc--- 52643640  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
      | |||||| ||||||||||||||||| ||||||    
T  52643639 --agatggtctctccgtccaaaagctccgttagtg 52643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 8167941 - 8168029
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaat 170  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||| |||||||||    
T  8167941 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 37088225 - 37088149
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattt 159  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattt 37088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 2871167 - 2871089
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattt 159  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||    
T  2871167 aagactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattt 2871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| |||||| |||||||||||||| | ||||||||| |||||||||||| ||||||||||||| || ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 1444274 - 1444181
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| ||||| | |||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| | ||| |||||||||||    
T  1444274 taaagactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 4854410 - 4854499
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||||||| ||||||||||||| ||||||||  ||| |||||||||||||||||| ||| ||| | ||| |||||||||||    
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 25276742 - 25276831
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| ||| ||| |||||||||| ||||||| | ||| |||||||||||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 27089368 - 27089279
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| || ||||||| |||||||||  ||||||| | |||||||||||||||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 37346051 - 37345962
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| |||||||| |||| ||| |||||||||||||| ||||||| | ||| |||||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 33599185 - 33599255
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaat 151  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  33599185 aagactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttgaaaaat 33599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  94 caaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| | |||||| ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 51894570 - 51894656
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| || ||||||||||||||||| || |||||| ||| ||||||||||| |||||| |||||| |||||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 9120039 - 9120128
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 25278854 - 25278931
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||| |||||||  |||||||||||| ||||||| | |||||| ||||||||||||||| |||||||||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctattta 25278931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 27940650 - 27940727
Alignment:
Q  125 caaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||||| |||| ||| ||||||| ||||||||| |||||||  |||||||||||||||| |||||||||||    
T  27940650 caaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 42134492 - 42134605
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    ||||||||| || ||||| |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  42134592 gtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 51121961 - 51122045
Alignment:
Q  139 aattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||||||||||||| ||||  |||||||||||  |  |||||||||||||||||||||||||||||||| ||  |||||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtgatg 51122045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 47011456 - 47011545
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| ||||||| |||||||| | ||||||| | ||| |||||||||||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattt 143  Q
    ||||||||| ||||||| |||||||||||||||||||| || | |||||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 1442551 - 1442614
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgca 147  Q
    |||||||| ||| | | ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgca 1442614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 35480081 - 35479976
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| |   ||| ||||||||| ||||| |||| ||| ||||||| | ||||||  |||||||  |||||||||||||||| ||||| |||    
T  35480081 gtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtccatcaaaaaggtccttcc 35479982  T
Q  201 gtccaa 206  Q
    ||||||    
T  35479981 gtccaa 35479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 36895624 - 36895511
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    |||||||||||| |||||||| |    |||| ||| ||||||| | |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| |    
T  36895624 tcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 36895525  T
Q  193 gtccctccgtccaa 206  Q
    |||||| |||||||    
T  36895524 gtcccttcgtccaa 36895511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 27952554 - 27952502
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  27952554 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 27952502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 35478124 - 35478176
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||| |||||| |||| ||||||||||| |||||||||||||||||    
T  35478124 tcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 46638894 - 46638808
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||| ||| ||||| |||| ||| ||||||| | ||| ||| |||||||  |||||||||| ||||| |||||||||||||||    
T  46638894 tcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaaggtccctccgtccaa 46638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 47269543 - 47269461
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| | | |||| || |||| ||||||||||||  || ||||||||||||| |||||||||||    
T  47269543 tcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtccatcaaaaaggtccctccgt 47269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 18180510 - 18180589
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||||||| |||||||| |  | |||||||||||| ||||| |||| ||| ||||||| ||||||| |||||||||    
T  18180510 tcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaattt 18180589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 44157470 - 44157553
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtc 203  Q
    |||||||||||| ||||| |||| ||||||||||| | ||| |||||||||||   |||||||||| ||||  |||| ||||||    
T  44157470 tcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtccataaaaaaagtccttccgtc 44157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 44159367 - 44159296
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| |||||||| | | ||||| ||| ||||||||| |||| ||||||||||| ||||||| |||||||||    
T  44159367 gtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaattt 44159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 1442600 - 1442646
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa 208  Q
    |||||||||||| |||||||||||||||   ||||||||||||||||    
T  1442600 tccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaa 1442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 18184030 - 18183960
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaa 190  Q
    ||||||||| || ||||| |||| ||| ||||||| | ||| |||||||||||  ||||||||||||||||    
T  18184030 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 18183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 31801670 - 31801756
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||| ||| ||||||||| |||| ||| ||||||| | ||| ||| | |||||   ||||||||||||||| |||||||||||||||    
T  31801670 tcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 33679299 - 33679348
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||||| |||| ||| ||||||| ||||||||| |||||||    
T  33679299 gccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 33679348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 45381066 - 45380985
Alignment:
Q  125 caaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    ||||||| ||||| |||| ||| ||||||| | ||| | | |||||||  |||||||||||||||| ||| |||||||||||    
T  45381066 caaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaa 45380985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 5784921 - 5784869
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  5784921 tcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 5784869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 31803754 - 31803702
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| | |||| ||| ||||||| |||||||||||||||||    
T  31803754 tcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 31803702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 45379122 - 45379174
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||||||||| |||||    
T  45379122 tcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaattt 45379174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 39859354 - 39859216
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  39859354 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 39859255  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    || ||||||||||||||||||||||||||||| ||||||    
T  39859254 ccgtcaaaatggtccctccgtccaaaagctccgttagtg 39859216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 24228530 - 24228396
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| |||| || || ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||| |||||||||||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtg 24228396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 37115651 - 37115513
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgt 181  Q
    |||||||||| ||||||| ||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  37115651 agactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgt 37115552  T
Q  182 ccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  37115551 ccatcaaaatagtccctccgtccaaaagctccgttagtg 37115513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 34777036 - 34776898
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| || ||| ||||||||||||| |||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  186 caaaatggtccctccgtccaaaagctccattagtgatga 224  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagtgatga 34776898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 6602335 - 6602472
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||  ||||||| | |||||||||||||||||||||| ||| |  |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtg 6602472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 45359336 - 45359473
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| | |||||||||| |||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtg 45359473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 30940549 - 30940412
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||||||| || |||||| | ||||||||||||| ||||||||||||||| ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtg 30940412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 38474267 - 38474130
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
     ||||||||||||| |||||||||||||||| ||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtg 38474130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 37796308 - 37796165
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagac 179  Q
    ||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||   |||||||| ||||||||||||| |||||||||||||| |||    
T  37796308 aaagagtaatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggac 37796209  T
Q  180 gtccatcaaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||||||||| ||||||||||||| ||||||| |||| ||||    
T  37796208 gtccatcaaaatagtccctccgtccataagctccgttagcgatg 37796165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 13168142 - 13168260
Alignment:
Q  105 ttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatc---cctgaattttacagacgtccatcaaaatggtccctccg 201  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||   ||||||||||||||||||||||||||||||||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  202 tccaaaagctccattagtg 220  Q
    |||||||||||| ||||||    
T  13168242 tccaaaagctccgttagtg 13168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 47386333 - 47386196
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| |||||| |||||||||||||| | ||||||||||| |||||||||| |||||| |||||| || || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||  |||||||||||||||| ||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtg 47386196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 27666189 - 27666063
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||| ||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||   |||||||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaag 27666063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 29996638 - 29996512
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||| | |||||||| ||||||||    
T  29996538 catcaaattcgtccctccatccaaaag 29996512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 56330 - 56435
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| || |||||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  183 catcaa 188  Q
    ||||||    
T  56430 catcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 13169772 - 13169683
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 20478042 - 20478167
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| ||||| |||||||||| | ||||||| | ||| |||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||||||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaa 20478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 39857648 - 39857734
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 23904583 - 23904672
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||| |||||||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 35403708 - 35403619
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 48852415 - 48852342
Alignment:
Q  139 aattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 212  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctc 48852342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 37113938 - 37114030
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||||| ||||| |||||    
T  37113938 aaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 13018036 - 13018158
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatat--ctatttaatccctgaattttacagacgtcc 183  Q
    |||||| |||||||  |||||||||||||||||||| |||||||||||||   ||||| || ||||||  |||||| ||| |||||||| ||| ||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  184 atcaaaatggtccctccgtccaa 206  Q
    |||||||||||||||||||||||    
T  13018136 atcaaaatggtccctccgtccaa 13018158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||||| ||||||| |||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| | ||| |||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 78103 - 78014
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||  |||||||||||    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 22155936 - 22155847
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| | || || ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 22211851 - 22211762
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| | || || ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 24226582 - 24226670
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||  ||| |||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 35401966 - 35402058
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||  ||||||| ||||||||||||| |||||||||| || |||||||||||||||||| ||||||| | ||| |||||||||||    
T  35401966 aaagactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 35693454 - 35693368
Alignment:
Q  125 caaattcgtccctgaattttgcaaaatatctat--ttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaag 209  Q
    ||||||||||| ||||||||||  ||||||| |  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35693454 caaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaag 35693368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 34774997 - 34775087
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||  ||||||| ||| ||||||||||||||||||| ||||||| | | |||||||||||||||| ||||||| |||||||||||    
T  34774997 agactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 47384293 - 47384383
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||  ||||||||||||| |||||||||| ||||||||| ||| |||| ||||||    
T  47384293 agactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||| ||||||| ||| ||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||  |||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 20479808 - 20479719
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||| ||||||| ||||| |||| ||| ||||||| | ||| |||||||||||| |||||||||||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  193 gtccctccgtccaa 206  Q
    ||||||||||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 38549547 - 38549628
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatcc 164  Q
    ||||||||| | ||||| ||||||||||||| ||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcc 38549628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 35344374 - 35344295
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||||||| |||| ||| ||||||| |||||||||||||||||   ||||||||||||||| |||||||||||    
T  35344374 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 46437106 - 46437196
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||  |||||||||| ||||| ||||||  ||| |||||||    
T  46437106 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatttt 144  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 8423365 - 8423286
Alignment:
Q  123 gccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||| |||||| |||| ||| ||||||| |||||||||||||||||  |||||||| ||||||| |||||||||||    
T  8423365 gccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctccgt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 23906306 - 23906255
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 213  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  23906306 tccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctcc 23906255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattt 143  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 46996789 - 46996686
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||| ||||||||| |||| ||| ||||||| | ||| || ||||||||  |||||||||||||||| |||||||||||||||  ||||| ||||     
T  46996789 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagc 46996690  T
Q  220 gatg 223  Q
    ||||    
T  46996689 gatg 46996686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 2167516 - 2167614
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattag 218  Q
    |||| ||||||| ||||| |||| ||| ||||||| | ||| |||||||||||  |||||| ||||||||| |||||||||||||||  ||||||||||    
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaagtgctccattag 2167614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  87 aatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||| ||||||| ||||||||||||| ||||||||| |||||||||| || |||||||| ||||| ||||||  ||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 13039713 - 13039641
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    ||||||||||||| |||||||   ||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  13039713 gtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 27955380 - 27955506
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |   ||| || |||||| ||||| |||||| | ||||||| | |||||  ||||||||  |||||||||||||||  |    
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  193 gtccctccgtccaaaagctccattagt 219  Q
    ||||||||||||||  ||||| |||||    
T  27955480 gtccctccgtccaagtgctccgttagt 27955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 45361365 - 45361279
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaa 169  Q
    ||||||||| |||||||  ||||||||||||||||||| || ||| || || ||||||||||||||||||  |||||| ||| ||||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaa 45361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 1546382 - 1546427
Alignment:
Q  178 acgtccatcaaaatggtccctccgtccaaaagctccattagtgatg 223  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  1546382 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatg 1546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 37791679 - 37791744
Alignment:
Q  108 aattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaatttt 173  Q
    |||||||||||||| ||||||||| ||||  |||||||| ||||||||||||| ||||| ||||||    
T  37791679 aattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 8421453 - 8421505
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  8421453 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 8421505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 48311803 - 48311733
Alignment:
Q  102 tccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||||||||||| | ||||||| ||| | |||||||| |||| |||| || ||||||||||||    
T  48311803 tccttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaattt 48311733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 46810741 - 46810794
Alignment:
Q  119 atcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| |||||| |||| ||| ||||||| |||||||||||||||||    
T  46810741 atcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaattt 46810794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 46812688 - 46812583
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| |  | |||||||||||| ||||| ||||  |  ||||||| ||||| ||||| |||||  |||||||||||||||| ||||  |||    
T  46812688 gtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaaggtcattcc 46812589  T
Q  201 gtccaa 206  Q
    ||||||    
T  46812588 gtccaa 46812583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 47341800 - 47341687
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatg 192  Q
    ||||||| ||||||||||||| |    |||||||||||| ||||| |||| ||| ||||||| | ||| |||||||||||  |||||||  ||||||| |    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttaatcaaaaag 47341701  T
Q  193 gtccctccgtccaa 206  Q
    ||  ||||||||||    
T  47341700 gtatctccgtccaa 47341687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 4321075 - 4321127
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  4321075 tcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaattt 4321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 23953848 - 23953928
Alignment:
Q  126 aaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||||| | |||| ||| ||||||| | ||| ||| |||||||  |||||||| ||||||| |||||||||||||||    
T  23953848 aaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaaggtccctccgtccaa 23953928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 30108602 - 30108654
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  30108602 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 30108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 35342462 - 35342514
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||| |||||| |||| ||| ||||||| |||||||||||||||||    
T  35342462 tcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 35342514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 45463707 - 45463807
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||| |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T
Q  220 g 220  Q
    |    
T  45463807 g 45463807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 6056849 - 6056903
Alignment:
Q  166 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  6056849 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 6056903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 38613568 - 38613498
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaa 190  Q
    |||||||||||| ||||| |||| ||| ||||||| | ||| |||||||||||  ||||||||||| ||||    
T  38613568 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaa 38613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 46439624 - 46439539
Alignment:
Q  81 aagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccct 166  Q
    ||||||||||  ||||||| ||| ||||||||| ||||||||  |||| | |||  | |||||||| ||||||||||||| |||||    
T  46439624 aagactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 45465238 - 45465186
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||| ||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  45465238 tcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 45465186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 46994697 - 46994749
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||| | |||| ||| ||||||| |||||||||||||||||    
T  46994697 tcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 46994749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 32439215 - 32439089
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    |||||||||||||||||||||||||||    
T  32439115 catcaaaatggtccctccgtccaaaag 32439089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 32516877 - 32517014
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||  || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtg 32517014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 7373079 - 7372945
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||| ||  ||||||||| |||||| || |||||||||||||||||||||| |||||| |||||| |||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtg 7372945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 13613706 - 13613569
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| | ||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||| | ||||||||||||||||| ||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtg 13613569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 20523367 - 20523492
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcc 183  Q
    |||||||| |||||||  |||| ||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  184 atcaaaatggtccctccgtccaaaag 209  Q
    ||||||||||||||||||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaag 20523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 6899485 - 6899622
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||||||||||||||||| ||||||| | |||||||||| || |||||||  ||||||||||||| ||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  183 catcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtg 6899622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 11355223 - 11355352
Alignment:
Q  84 actaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcc 183  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||   ||||||||||| | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  184 atcaaaatggtccctccgtccaaaagctcc 213  Q
    | ||||||||||||||||||||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctcc 11355352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 10568403 - 10568536
Alignment:
Q  87 aatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatc 186  Q
    ||||| ||||||| ||||||||||||| ||||||| | ||||||||||| ||||||| || |||||| |||||| ||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  187 aaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||| ||||||||||||||||||||| ||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtg 10568536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 14338581 - 14338458
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| ||||||| |||||||||||||   |||||||| |||| |||| || |||||||||||| |||||||||||||||||||||||||||    
T  14338581 gtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctcc 14338482  T
Q  201 gtccaaaagctccattagtgatga 224  Q
    || |||||||||| ||| ||||||    
T  14338481 gttcaaaagctccgttactgatga 14338458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 11357286 - 11357194
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||| |||||||||||    
T  11357286 aaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 3456766 - 3456873
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctcc 200  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||| |||||||||||| |||||||||||||||   ||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  201 gtccaaaa 208  Q
    ||||||||    
T  3456866 gtccaaaa 3456873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 10570009 - 10569931
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10570009 agactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctattta 10569931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 32456015 - 32455890
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| || ||||||||| ||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  183 catcaaaatggtccctccgtccaaaa 208  Q
    |||||||   ||||||||||||||||    
T  32455915 catcaaatcagtccctccgtccaaaa 32455890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 9398713 - 9398797
Alignment:
Q  136 ctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtg 9398797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 32518590 - 32518497
Alignment:
Q  79 taaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | ||| |||||||||||    
T  32518590 taaagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 7049836 - 7049887
Alignment:
Q  162 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7049836 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 7049887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaat 151  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 2968180 - 2968258
Alignment:
Q  124 ccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||  |||||||||||||||| ||||| |||||    
T  2968180 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 4641392 - 4641474
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||||||||||| |||| ||  ||||||| |||||||||||||||||  ||||| |||||||||| |||||||||||    
T  4641392 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 8605415 - 8605349
Alignment:
Q  82 agactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaa 148  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  8605415 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgcaa 8605349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 3480746 - 3480657
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||| |  || |||||||||||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaata 152  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| ||||||| | ||||||| ||| |||||||||| ||||||||| ||| |||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 20525423 - 20525334
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||| ||||||||| |||||| || ||||||| |||||||||||||||||||| ||||||  ||| |||||||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 32454248 - 32454337
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||| | ||| |||||||||||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 6902989 - 6902910
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    |||||||||||| ||||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||  ||||||||||||    
T  6902989 aaagactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgc-gaatatctattta 6902910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 18645195 - 18645104
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| | |||||||| ||||||||||| ||||||| | ||| ||| |||||||    
T  18645195 aaagactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaattt 18645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 3018519 - 3018433
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaa 206  Q
    |||||||| ||||||||| |||| ||| ||||||| | ||| |||||||||||  |||||||||||||||| ||||||||| |||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccatccaa 3018433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 29077365 - 29077447
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| ||| |||| || |||| ||||||||||||  |||||||||||||||| |||||||||||    
T  29077365 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 29112337 - 29112419
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    ||||||||||| |||||| |||| ||| |||| || |||| ||||||||||||  |||||||||||||||| |||||||||||    
T  29112337 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 7051312 - 7051257
Alignment:
Q  105 ttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  7051312 ttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctattta 7051257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 13610690 - 13610761
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatc 154  Q
    ||||||||| | ||||| ||||||||||||| ||||||||  |||||| ||||||||||||||| |||||||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatc 13610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 7049796 - 7049847
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaatttt 144  Q
    |||||||  |||||||||||| ||||||| ||||||||||||||||||||||    
T  7049796 tcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 33276819 - 33276878
Alignment:
Q  101 gtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    ||||||||||||||||||||| | |||||||||  || |||||||| |||||||||||||    
T  33276819 gtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctattta 33276878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 25172155 - 25172097
Alignment:
Q  161 atccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||| ||| |||||||| ||||| |||| |||||||||| |||||||||||    
T  25172155 atccctgaatttaacaaacgtccataaaaatagtccttccgtccaaatgctccattagt 25172097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 30891159 - 30891261
Alignment:
Q  118 aatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccatta 217  Q
    |||||| ||||||  ||| | |||| ||||||||||   |||| |||||||||||  |||||||||| |||| | ||||||||||||||| |||| ||||    
T  30891159 aatcggtcaaatttatccttaaattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaagtagtccctccgtccaaatgctctatta 30891258  T
Q  218 gtg 220  Q
    |||    
T  30891259 gtg 30891261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 17950598 - 17950650
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  17950598 tcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 17950650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 21068628 - 21068702
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattta 160  Q
    |||||| ||||||| ||||||||||||| || |||| | |||||||||||   |||||| | |||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctattta 21068702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 17952129 - 17952029
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccattagt 219  Q
    |||||||||||||||||  |||||  | ||||||| |  || |||||||||||    ||||||||||||  | ||||||||||||||||| ||| |||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T
Q  220 g 220  Q
    |    
T  17952029 g 17952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 30639648 - 30639700
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||||| |||||| |||| ||||||||||| ||||||||  |||||||    
T  30639648 tcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaattt 30639700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 1266 - 1400
Alignment:
Q  86 taatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccat 185  Q
    |||||| ||||||  |||||||||||||||||||| ||  |||||||||| ||||||||   ||||||||||||| ||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  186 caaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||||||||||||||||||||| ||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtg 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 3294 - 3420
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| || ||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||| | |||||||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaag 3420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 4466 - 4592
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtc 182  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| || ||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  183 catcaaaatggtccctccgtccaaaag 209  Q
    ||||||| | |||||||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 14432 - 14343
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| || |||||||||||||||||| ||||||| | ||| |||||||||||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 8264 - 8397
Alignment:
Q  85 ctaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtcca 184  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  185 tcaaaatggtccctccgtccaaaagctccattagtg 220  Q
    |||||||||| | |||||||||||||| | ||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtg 8397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 1647 - 1555
Alignment:
Q  80 aaagactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||| |||||||||||    
T  1647 aaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 6721 - 6639
Alignment:
Q  120 tcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 202  Q
    |||||||||||||||||| |||| ||  ||||||| |||||||||||||||||  ||||| |||||||||| |||||||||||    
T  6721 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 54347 - 54258
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||| |||||||||||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 982 - 1071
Alignment:
Q  83 gactaatacttcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctatttaatccctgaattt 172  Q
    ||||||||| ||||| | ||||||||||||| |||||||||| || |||||||||||||| | | ||||||| |  || |||||||||||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 436275 - 436341
Alignment:
Q  93 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcaaaatatctattt 159  Q
    ||||||| || |||||||||| ||||||| ||||||||| ||| | |||||||| ||||||||||||    
T  436275 tcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University