View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15275_low_4 (Length: 418)
Name: NF15275_low_4
Description: NF15275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15275_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 20545326 - 20545733
Alignment:
| Q |
1 |
attaaactccgcaaccctgcaaaggctagtgttgggcatagggcagtaggggtgtattgaaagtctcacattccacatgatatgcgtgggggtacattta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545326 |
attaaactccgcaaccctgcaaaggctagtgttgggcatagggcagtaggggtgtattgaaagtctcacattccacatgatatgcgtgggggtacattta |
20545425 |
T |
|
| Q |
101 |
cgtgtaggagtgtgctttttaagctgattttgtggggtcgaattagacctgagttaaattctgagatttttcatgttggttagaacatggttattacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545426 |
cgtgtaggagtgtgctttttaagctgattttgtggggtcgaattagacctgagttaaattctgagatttttcatgttggttagaacatggttattacaaa |
20545525 |
T |
|
| Q |
201 |
tattagaacatggtaacttatacatttcagagatgctattcatatcaattacaaactttgacttaggatgtttgagatatatatgagttttaagttctgt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545526 |
tattagaacatggtaacttatacatttcagagatgctattcatatcaattacaaactttgacttaggatgtttgagatatatatgagttttaagttctgt |
20545625 |
T |
|
| Q |
301 |
attagctcattgaaatttgttttcctctctaaagttttatataaactacaagtttgaaattctaggatatatctctgaggtctatgttttatttatgttt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545626 |
attagctcattgaaatttgttttcctctctaaagttttatataaactacaagtttgaaattctaggatatatctctgaggtctatgttttatttatgttt |
20545725 |
T |
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| Q |
401 |
gacctatg |
408 |
Q |
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|||||||| |
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| T |
20545726 |
gacctatg |
20545733 |
T |
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