View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15276_high_23 (Length: 251)
Name: NF15276_high_23
Description: NF15276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15276_high_23 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1970743 - 1970977
Alignment:
| Q |
1 |
ccaggcagataaaacgactggaggaataaacaaaacgaaagacatatataagcccttggtttagtcacacaatcttggattaaaatcatcaaaattttaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
1970743 |
ccaggcagataaaacgactggaggaataaacaaaacgaaagacatatataagcccttggtttagtcacacaatcttggattaaaatcatcgaaattttaa |
1970842 |
T |
|
| Q |
101 |
caaactcacctttcctgaacatatttcctcatccgcccaaattaaattatatccagctttctttctgtcaagtctggcaaagtagaaattagtggagaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
1970843 |
caaactcacctttcctgaacatatttcctcatccgcccaaattaaattatatccagctttctttctgtcaagtctggctaagtagaaattagtggagaca |
1970942 |
T |
|
| Q |
201 |
ttagtattttcctgattaatattactagcagaaag |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
1970943 |
ttagtattttcctgattaatattactagcagaaag |
1970977 |
T |
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