View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15276_high_9 (Length: 336)
Name: NF15276_high_9
Description: NF15276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15276_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 1970723 - 1970395
Alignment:
| Q |
1 |
aagcaaatggaagactggaccctgaagccgccgcctctttgcctttggagtcgccctgactggactgcttggcacatgcaaattgctcgaatgcatcgcc |
100 |
Q |
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|||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1970723 |
aagcaattggaagactggaacctgaagccgccgcctctttacctttggagtcgccctgactggactgcttggcacatgcaaattgctcgaatgcatcgcc |
1970624 |
T |
|
| Q |
101 |
acatcaaatatgatgcgtataataataataaaggnnnnnnngtgacaaattatcttatggaggagaatcatgattgttatcagaattaccctgggttaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1970623 |
acatcaaatatgatgcgtataataataataaaggaaaaaaagtgacaaattatcttatggaggagaatcatgattgttatcagaattaccctgggttaca |
1970524 |
T |
|
| Q |
201 |
tgcacctaataattttttaagcatatttgatggtgttccagatgataatggtgacattgtaacagagaatggagcaactaggtttccttgatgaagagaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
1970523 |
tgcacctaataattttttaagcatatttgatggtgttccagatgataatggtgacattataacagagaatggagcaactaggtttccttgatgaagagaa |
1970424 |
T |
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| Q |
301 |
ctagaatgggaggatggattacctatgat |
329 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
1970423 |
ctagaatgggaggatggattacctatgat |
1970395 |
T |
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