View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15276_low_32 (Length: 237)
Name: NF15276_low_32
Description: NF15276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15276_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 22045675 - 22045882
Alignment:
| Q |
14 |
caaaggcaaagtattgattgatatggctgagatatattgacatgacattgggtaagataacattgggacaattaaactttaaaaagattcccatgattat |
113 |
Q |
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| T |
22045675 |
caaaagcaaagtattgattgatatggctgagatatattgacatgactttgggtaagataacattgggacaattaaactttcaaaagattcacatgattat |
22045774 |
T |
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| Q |
114 |
gtaagggaaatcaaagaatgcaatgataaggaatacttgtgtgcttgagaaaccaaatttgcatgtggcgtgtatttgtgctggtgttatctcttattgg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
22045775 |
gtaagggaaatcaaagaatgcaatgataaggaatacttgtttgcttgagaaaccaaatttgcatgtgacgtgtatttgtgctggtgttatctcttattgg |
22045874 |
T |
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| Q |
214 |
gaaacaaa |
221 |
Q |
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||||||| |
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| T |
22045875 |
aaaacaaa |
22045882 |
T |
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