View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15277_high_5 (Length: 368)
Name: NF15277_high_5
Description: NF15277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15277_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 34253214 - 34253438
Alignment:
| Q |
1 |
tcgtaggttttctcaaagactagtccatagagcgtgattttcatcttgttggctttactcataagtgccacattaatagatcctagttccaggtagcagt |
100 |
Q |
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| T |
34253214 |
tcgtaggttttctcaaagactagtccatagagcgtgattttcatcttgttggctttactcataagtgccacattaatagatcctagttccaggtagcagt |
34253313 |
T |
|
| Q |
101 |
tagtggagtctgcatccttctaagaatgatgtcatgagttagcatcactttatatcattgggtatgtgcacaaattaaggagttaaacaagtaattaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34253314 |
tagtggagtctgcatccttctaagaatgatgtcatgagttagcatcactttatatcattgggtatgtgcacaaattaaggagttaaacaagtaattaaaa |
34253413 |
T |
|
| Q |
201 |
gacaagttatgcattgcaaagataa |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
34253414 |
gacaagttatgcattgcaaagataa |
34253438 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 34254179 - 34254304
Alignment:
| Q |
229 |
aaagaaaccttcgttaaggatttggctcgtataaatcaagtagttaatctgaaaagtcaatgaccgatatttcaacatggttgatctttggttatgcatg |
328 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34254179 |
aaagaaaccttcgttaaggatttggctcgtataaatcaagtagttaatctgaaaagtcaatgaccgatatttcaacatggttgatctttggttatgcatg |
34254278 |
T |
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| Q |
329 |
tgcataaaatagtaactattaattat |
354 |
Q |
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||||||||||||||||||| |||||| |
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| T |
34254279 |
tgcataaaatagtaactatgaattat |
34254304 |
T |
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