View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15277_low_4 (Length: 408)

Name: NF15277_low_4
Description: NF15277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15277_low_4
NF15277_low_4
[»] chr2 (55 HSPs)
chr2 (309-393)||(14530301-14530385)
chr2 (309-393)||(23397749-23397831)
chr2 (309-393)||(10543681-10543765)
chr2 (309-393)||(12023987-12024070)
chr2 (309-393)||(24200693-24200777)
chr2 (309-393)||(8455384-8455468)
chr2 (309-393)||(5841011-5841095)
chr2 (309-391)||(33795268-33795350)
chr2 (309-393)||(21779329-21779411)
chr2 (309-393)||(7214517-7214601)
chr2 (309-393)||(11514419-11514503)
chr2 (309-393)||(17667985-17668069)
chr2 (309-393)||(19977782-19977866)
chr2 (309-394)||(17896242-17896328)
chr2 (309-393)||(5450268-5450353)
chr2 (309-393)||(17623547-17623631)
chr2 (309-393)||(25249806-25249889)
chr2 (315-394)||(19614981-19615060)
chr2 (309-393)||(9671163-9671246)
chr2 (317-383)||(14444720-14444785)
chr2 (309-393)||(22371040-22371121)
chr2 (317-393)||(10546153-10546230)
chr2 (309-393)||(17705478-17705562)
chr2 (309-393)||(40416939-40417023)
chr2 (309-392)||(21377142-21377225)
chr2 (311-370)||(25641487-25641546)
chr2 (309-394)||(26684687-26684774)
chr2 (309-380)||(29419970-29420041)
chr2 (309-380)||(44604837-44604907)
chr2 (309-363)||(99361-99415)
chr2 (319-393)||(23145766-23145840)
chr2 (319-393)||(23557556-23557630)
chr2 (309-365)||(17380332-17380388)
chr2 (309-393)||(27573604-27573687)
chr2 (309-387)||(45235891-45235970)
chr2 (309-371)||(25079808-25079870)
chr2 (309-371)||(39914396-39914458)
chr2 (324-393)||(32781356-32781425)
chr2 (309-393)||(4516419-4516503)
chr2 (335-394)||(15296474-15296533)
chr2 (309-380)||(31158522-31158593)
chr2 (346-393)||(40762302-40762349)
chr2 (324-393)||(2003604-2003674)
chr2 (309-393)||(14544046-14544131)
chr2 (341-394)||(30864484-30864536)
chr2 (309-357)||(35017800-35017849)
chr2 (341-393)||(30826052-30826103)
chr2 (308-364)||(34752759-34752815)
chr2 (311-381)||(31821423-31821491)
chr2 (342-393)||(36871509-36871559)
chr2 (327-365)||(13245182-13245220)
chr2 (309-371)||(17472954-17473016)
chr2 (309-383)||(44521451-44521525)
chr2 (311-364)||(4852311-4852364)
chr2 (309-370)||(24860077-24860138)
[»] chr4 (66 HSPs)
chr4 (309-394)||(21646947-21647032)
chr4 (309-394)||(39077863-39077946)
chr4 (309-393)||(48598893-48598975)
chr4 (309-393)||(5648242-5648325)
chr4 (309-393)||(6430694-6430777)
chr4 (309-393)||(16408671-16408755)
chr4 (309-393)||(41018862-41018945)
chr4 (309-393)||(47528598-47528680)
chr4 (309-381)||(7385556-7385628)
chr4 (309-393)||(17043462-17043546)
chr4 (309-393)||(19027831-19027915)
chr4 (309-393)||(20224967-20225049)
chr4 (313-393)||(5306732-5306811)
chr4 (309-393)||(16911545-16911629)
chr4 (309-393)||(30639363-30639446)
chr4 (309-393)||(40915812-40915895)
chr4 (325-393)||(47443956-47444024)
chr4 (309-383)||(42164227-42164300)
chr4 (309-391)||(44363202-44363284)
chr4 (309-393)||(9832381-9832463)
chr4 (309-393)||(11054216-11054298)
chr4 (309-393)||(54175046-54175130)
chr4 (309-393)||(487203-487287)
chr4 (309-381)||(14983817-14983889)
chr4 (314-393)||(7038041-7038119)
chr4 (312-371)||(25463108-25463167)
chr4 (311-373)||(30690271-30690333)
chr4 (309-383)||(35567153-35567227)
chr4 (309-393)||(14590820-14590905)
chr4 (309-394)||(37494834-37494919)
chr4 (309-370)||(49938681-49938742)
chr4 (309-393)||(54730232-54730317)
chr4 (309-393)||(10660387-10660471)
chr4 (309-393)||(10874532-10874616)
chr4 (309-393)||(25343170-25343254)
chr4 (318-393)||(29207966-29208039)
chr4 (309-383)||(17315377-17315450)
chr4 (309-383)||(43035231-43035305)
chr4 (309-371)||(54640429-54640491)
chr4 (309-393)||(23501776-23501854)
chr4 (309-365)||(12257689-12257745)
chr4 (309-365)||(30496416-30496472)
chr4 (311-363)||(32629366-32629418)
chr4 (309-393)||(39029129-39029213)
chr4 (309-381)||(54967004-54967076)
chr4 (309-356)||(5313099-5313146)
chr4 (309-393)||(13256469-13256549)
chr4 (309-376)||(23580293-23580360)
chr4 (343-393)||(20639727-20639777)
chr4 (309-371)||(30352681-30352743)
chr4 (309-383)||(32478864-32478937)
chr4 (309-393)||(47441598-47441682)
chr4 (338-393)||(9987902-9987957)
chr4 (320-365)||(41549376-41549421)
chr4 (309-365)||(8473716-8473772)
chr4 (330-393)||(10277825-10277886)
chr4 (309-353)||(50856344-50856388)
chr4 (346-393)||(25629069-25629116)
chr4 (336-371)||(36589753-36589788)
chr4 (309-392)||(49938508-49938590)
chr4 (309-379)||(7227715-7227785)
chr4 (338-392)||(21489099-21489153)
chr4 (326-371)||(30581557-30581602)
chr4 (324-393)||(44357218-44357287)
chr4 (309-393)||(51420556-51420641)
chr4 (309-365)||(55830816-55830873)
[»] chr8 (46 HSPs)
chr8 (309-393)||(28817694-28817778)
chr8 (309-393)||(36720779-36720863)
chr8 (309-393)||(12670318-12670400)
chr8 (309-393)||(18164828-18164911)
chr8 (309-393)||(39461064-39461148)
chr8 (309-393)||(45071248-45071331)
chr8 (309-383)||(30962851-30962925)
chr8 (309-393)||(20869566-20869648)
chr8 (309-393)||(26954115-26954200)
chr8 (309-393)||(6760805-6760889)
chr8 (309-393)||(8897832-8897916)
chr8 (309-393)||(13160685-13160768)
chr8 (309-393)||(29521753-29521837)
chr8 (309-393)||(20284139-20284225)
chr8 (309-393)||(21070767-21070854)
chr8 (309-382)||(28407399-28407471)
chr8 (309-389)||(30454169-30454247)
chr8 (309-390)||(42083770-42083851)
chr8 (309-393)||(7136597-7136681)
chr8 (309-393)||(22598140-22598224)
chr8 (309-393)||(25250505-25250589)
chr8 (309-393)||(35261662-35261746)
chr8 (309-371)||(2626502-2626564)
chr8 (309-370)||(17823559-17823620)
chr8 (309-393)||(14018037-14018121)
chr8 (309-393)||(31457156-31457239)
chr8 (309-393)||(35105906-35105990)
chr8 (313-393)||(44530136-44530216)
chr8 (309-393)||(44781574-44781658)
chr8 (332-393)||(5135357-5135418)
chr8 (309-394)||(11748282-11748367)
chr8 (309-393)||(24365127-24365212)
chr8 (325-393)||(389642-389712)
chr8 (309-353)||(24245434-24245478)
chr8 (330-393)||(8484006-8484069)
chr8 (312-370)||(23000309-23000365)
chr8 (309-393)||(44742587-44742671)
chr8 (343-393)||(29877111-29877161)
chr8 (344-393)||(20869941-20869990)
chr8 (337-393)||(17250945-17251001)
chr8 (328-371)||(12625891-12625934)
chr8 (350-393)||(43942348-43942391)
chr8 (335-393)||(5689640-5689698)
chr8 (309-371)||(11001040-11001102)
chr8 (317-355)||(27635020-27635058)
chr8 (309-393)||(40604973-40605057)
[»] chr7 (61 HSPs)
chr7 (309-393)||(19426957-19427041)
chr7 (309-393)||(46354177-46354261)
chr7 (309-393)||(10693141-10693223)
chr7 (309-393)||(42805507-42805591)
chr7 (309-393)||(43557455-43557539)
chr7 (309-393)||(47716442-47716526)
chr7 (309-389)||(2541091-2541172)
chr7 (309-393)||(21172077-21172159)
chr7 (309-393)||(42391168-42391250)
chr7 (309-393)||(11617656-11617740)
chr7 (309-393)||(16341261-16341345)
chr7 (315-393)||(29907408-29907486)
chr7 (309-393)||(32758244-32758326)
chr7 (309-381)||(27629617-27629689)
chr7 (309-393)||(33871978-33872061)
chr7 (309-393)||(42798652-42798736)
chr7 (309-380)||(5180238-5180309)
chr7 (309-380)||(7644939-7645010)
chr7 (309-383)||(7193068-7193142)
chr7 (309-393)||(11741778-11741860)
chr7 (309-393)||(47077923-47078005)
chr7 (309-393)||(12473287-12473371)
chr7 (325-393)||(18512521-18512588)
chr7 (309-393)||(19265798-19265881)
chr7 (309-393)||(22699038-22699122)
chr7 (313-393)||(23419742-23419822)
chr7 (309-393)||(34626276-34626359)
chr7 (309-381)||(42495916-42495987)
chr7 (309-383)||(18327017-18327090)
chr7 (320-394)||(35203433-35203507)
chr7 (309-393)||(48735190-48735273)
chr7 (309-393)||(14099074-14099158)
chr7 (309-393)||(14409091-14409175)
chr7 (309-393)||(19266433-19266517)
chr7 (309-393)||(28362213-28362297)
chr7 (336-393)||(2663003-2663058)
chr7 (309-371)||(7794596-7794658)
chr7 (327-393)||(7879639-7879705)
chr7 (309-383)||(14732900-14732974)
chr7 (317-379)||(38262278-38262340)
chr7 (309-379)||(48123566-48123636)
chr7 (309-382)||(32233214-32233286)
chr7 (309-393)||(42476856-42476938)
chr7 (309-365)||(13805085-13805141)
chr7 (309-393)||(40463860-40463943)
chr7 (309-383)||(5814454-5814528)
chr7 (312-393)||(18747472-18747554)
chr7 (309-371)||(21447573-21447635)
chr7 (324-393)||(31591177-31591244)
chr7 (309-393)||(8149013-8149098)
chr7 (309-393)||(35334884-35334966)
chr7 (313-370)||(44123712-44123769)
chr7 (309-379)||(1423992-1424062)
chr7 (309-363)||(6736873-6736927)
chr7 (309-355)||(28078237-28078283)
chr7 (309-370)||(39123873-39123934)
chr7 (345-393)||(38604546-38604593)
chr7 (338-393)||(1408469-1408524)
chr7 (330-393)||(43852047-43852109)
chr7 (309-371)||(3469269-3469331)
chr7 (309-379)||(42101967-42102037)
[»] chr6 (35 HSPs)
chr6 (309-393)||(12221985-12222069)
chr6 (309-393)||(29355925-29356009)
chr6 (309-393)||(1346947-1347029)
chr6 (309-393)||(1354825-1354907)
chr6 (309-393)||(8409226-8409310)
chr6 (309-393)||(9161106-9161189)
chr6 (309-393)||(2166480-2166564)
chr6 (309-393)||(2178113-2178197)
chr6 (309-393)||(3815145-3815229)
chr6 (309-393)||(6024216-6024300)
chr6 (309-392)||(13905048-13905131)
chr6 (309-383)||(14553495-14553568)
chr6 (309-371)||(14975170-14975232)
chr6 (309-393)||(12889409-12889493)
chr6 (309-388)||(15866110-15866189)
chr6 (309-390)||(20400650-20400731)
chr6 (326-393)||(28007628-28007693)
chr6 (318-381)||(17432332-17432395)
chr6 (312-394)||(23240891-23240971)
chr6 (319-393)||(7947440-7947514)
chr6 (311-381)||(18277273-18277343)
chr6 (318-391)||(17448316-17448389)
chr6 (309-394)||(32728223-32728308)
chr6 (309-393)||(1941838-1941922)
chr6 (309-393)||(2755492-2755576)
chr6 (309-363)||(12063450-12063504)
chr6 (313-383)||(24097568-24097638)
chr6 (331-393)||(33138838-33138900)
chr6 (312-383)||(22967157-22967227)
chr6 (312-383)||(23821166-23821236)
chr6 (309-371)||(24734616-24734678)
chr6 (344-393)||(25557743-25557790)
chr6 (344-393)||(26097178-26097225)
chr6 (336-393)||(32579436-32579492)
chr6 (325-361)||(15865956-15865992)
[»] chr5 (44 HSPs)
chr5 (309-393)||(24448873-24448957)
chr5 (309-393)||(38879564-38879648)
chr5 (309-393)||(4619174-4619258)
chr5 (309-393)||(27328735-27328819)
chr5 (309-393)||(41014302-41014385)
chr5 (309-391)||(37024626-37024706)
chr5 (313-393)||(32703411-32703489)
chr5 (309-393)||(35710296-35710378)
chr5 (309-393)||(43334185-43334270)
chr5 (309-383)||(23974763-23974837)
chr5 (309-393)||(8170052-8170134)
chr5 (324-383)||(22025541-22025600)
chr5 (309-393)||(12006398-12006482)
chr5 (309-393)||(22187268-22187352)
chr5 (309-393)||(28516502-28516586)
chr5 (307-393)||(1405168-1405254)
chr5 (309-371)||(1565414-1565476)
chr5 (335-393)||(13801837-13801895)
chr5 (310-370)||(1850624-1850684)
chr5 (309-381)||(39301106-39301178)
chr5 (318-393)||(42924902-42924977)
chr5 (309-383)||(209006-209079)
chr5 (309-390)||(19143014-19143094)
chr5 (329-394)||(43574609-43574674)
chr5 (311-363)||(18698596-18698648)
chr5 (309-365)||(22861762-22861818)
chr5 (309-383)||(10634224-10634298)
chr5 (311-370)||(22907955-22908014)
chr5 (309-380)||(24903777-24903848)
chr5 (309-355)||(9794465-9794511)
chr5 (309-371)||(34074652-34074714)
chr5 (309-393)||(2838761-2838845)
chr5 (341-390)||(5873393-5873441)
chr5 (341-393)||(7368413-7368463)
chr5 (345-393)||(20135623-20135671)
chr5 (309-393)||(22600437-22600521)
chr5 (309-356)||(17419897-17419944)
chr5 (346-393)||(29334415-29334462)
chr5 (309-352)||(39079875-39079918)
chr5 (330-393)||(41425952-41426015)
chr5 (351-393)||(16880715-16880757)
chr5 (309-363)||(31299615-31299669)
chr5 (309-342)||(31362454-31362487)
chr5 (309-393)||(4809992-4810076)
[»] chr3 (55 HSPs)
chr3 (309-393)||(8247757-8247841)
chr3 (309-393)||(13628860-13628944)
chr3 (309-393)||(46421105-46421189)
chr3 (312-393)||(516417-516498)
chr3 (309-393)||(13730672-13730756)
chr3 (309-393)||(26573132-26573216)
chr3 (309-393)||(29366790-29366874)
chr3 (309-389)||(34420716-34420796)
chr3 (309-388)||(10870025-10870103)
chr3 (309-393)||(26869712-26869795)
chr3 (309-393)||(40272880-40272964)
chr3 (309-393)||(1217095-1217177)
chr3 (309-393)||(7696955-7697037)
chr3 (309-393)||(22122985-22123067)
chr3 (312-381)||(30928227-30928296)
chr3 (309-393)||(45620896-45620981)
chr3 (309-378)||(53062043-53062112)
chr3 (309-393)||(4495732-4495816)
chr3 (309-393)||(9607208-9607292)
chr3 (309-393)||(22609771-22609854)
chr3 (315-393)||(54032627-54032705)
chr3 (309-370)||(5173811-5173872)
chr3 (309-393)||(39203521-39203603)
chr3 (319-392)||(54374415-54374488)
chr3 (309-393)||(7942995-7943079)
chr3 (309-393)||(12914103-12914187)
chr3 (309-393)||(19731007-19731091)
chr3 (309-365)||(52926306-52926362)
chr3 (309-393)||(53996634-53996718)
chr3 (315-393)||(33926094-33926171)
chr3 (327-393)||(45948906-45948972)
chr3 (332-393)||(10795493-10795554)
chr3 (336-393)||(14986989-14987046)
chr3 (309-393)||(6411890-6411973)
chr3 (311-383)||(12525414-12525486)
chr3 (309-393)||(16735446-16735529)
chr3 (312-379)||(26782374-26782441)
chr3 (315-393)||(45139546-45139624)
chr3 (312-393)||(19751586-19751667)
chr3 (333-393)||(31592878-31592936)
chr3 (309-393)||(25944474-25944558)
chr3 (310-393)||(29106555-29106638)
chr3 (309-376)||(35417921-35417988)
chr3 (324-393)||(52428545-52428615)
chr3 (317-393)||(39212003-39212079)
chr3 (310-383)||(8410945-8411016)
chr3 (347-393)||(49013543-49013589)
chr3 (309-358)||(4537036-4537085)
chr3 (350-393)||(45786284-45786327)
chr3 (330-393)||(9276284-9276353)
chr3 (337-371)||(43114960-43114994)
chr3 (324-393)||(1121293-1121362)
chr3 (333-393)||(21875042-21875103)
chr3 (336-393)||(55401208-55401265)
chr3 (346-393)||(31831241-31831286)
[»] chr1 (64 HSPs)
chr1 (309-393)||(18724613-18724697)
chr1 (309-393)||(27201653-27201737)
chr1 (309-393)||(34725166-34725248)
chr1 (309-393)||(2435855-2435939)
chr1 (309-393)||(6925106-6925190)
chr1 (309-393)||(18944649-18944733)
chr1 (309-393)||(30395796-30395880)
chr1 (309-393)||(32632625-32632708)
chr1 (308-393)||(38478350-38478433)
chr1 (309-393)||(20004160-20004244)
chr1 (309-393)||(23768388-23768472)
chr1 (309-393)||(25468331-25468415)
chr1 (309-393)||(41319874-41319958)
chr1 (309-393)||(46248021-46248105)
chr1 (309-393)||(46991810-46991894)
chr1 (309-383)||(22327105-22327179)
chr1 (309-390)||(8197049-8197130)
chr1 (317-393)||(10668239-10668315)
chr1 (309-393)||(14617044-14617128)
chr1 (309-393)||(17470414-17470498)
chr1 (309-393)||(35117836-35117920)
chr1 (309-393)||(12126905-12126987)
chr1 (309-393)||(47214517-47214599)
chr1 (309-381)||(22930148-22930219)
chr1 (309-393)||(44485177-44485261)
chr1 (319-393)||(35005139-35005213)
chr1 (311-393)||(50760294-50760376)
chr1 (317-393)||(35253255-35253329)
chr1 (309-393)||(45812605-45812687)
chr1 (309-373)||(2435981-2436045)
chr1 (313-393)||(11596523-11596602)
chr1 (309-365)||(20036226-20036282)
chr1 (309-382)||(25290169-25290244)
chr1 (309-393)||(27474287-27474370)
chr1 (309-393)||(33222990-33223073)
chr1 (309-363)||(9939467-9939521)
chr1 (309-355)||(34714629-34714675)
chr1 (309-393)||(19414445-19414527)
chr1 (313-390)||(31272446-31272522)
chr1 (309-370)||(45402101-45402161)
chr1 (309-393)||(4430094-4430178)
chr1 (313-392)||(24564354-24564433)
chr1 (309-359)||(6983911-6983961)
chr1 (309-393)||(19932823-19932904)
chr1 (309-393)||(50811945-50812030)
chr1 (319-383)||(45264478-45264542)
chr1 (309-361)||(52910223-52910275)
chr1 (314-393)||(19974143-19974221)
chr1 (309-383)||(15511229-15511303)
chr1 (309-371)||(19701576-19701638)
chr1 (335-393)||(22324925-22324982)
chr1 (313-355)||(43768168-43768210)
chr1 (312-393)||(18335356-18335437)
chr1 (142-198)||(16949393-16949449)
chr1 (309-352)||(10378834-10378877)
chr1 (324-371)||(23371145-23371192)
chr1 (309-393)||(18742027-18742113)
chr1 (345-391)||(34149030-34149076)
chr1 (309-347)||(40424748-40424786)
chr1 (309-363)||(49722670-49722724)
chr1 (344-393)||(31382282-31382330)
chr1 (309-393)||(19656174-19656258)
chr1 (309-361)||(22151510-22151562)
chr1 (309-365)||(25554818-25554874)
[»] scaffold0049 (1 HSPs)
scaffold0049 (312-393)||(58963-59044)
[»] scaffold0187 (2 HSPs)
scaffold0187 (309-393)||(10118-10200)
scaffold0187 (309-393)||(20446-20528)
[»] scaffold0168 (1 HSPs)
scaffold0168 (309-393)||(30562-30644)
[»] scaffold0258 (1 HSPs)
scaffold0258 (309-393)||(13092-13175)
[»] scaffold0057 (3 HSPs)
scaffold0057 (309-393)||(46814-46898)
scaffold0057 (309-391)||(24842-24919)
scaffold0057 (309-349)||(46995-47035)
[»] scaffold0254 (1 HSPs)
scaffold0254 (309-393)||(4140-4224)
[»] scaffold0005 (1 HSPs)
scaffold0005 (309-393)||(226473-226558)
[»] scaffold0223 (1 HSPs)
scaffold0223 (317-365)||(11122-11170)
[»] scaffold0036 (1 HSPs)
scaffold0036 (312-393)||(35085-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (312-370)||(43115-43173)
[»] scaffold1176 (1 HSPs)
scaffold1176 (309-393)||(1655-1737)
[»] scaffold0311 (1 HSPs)
scaffold0311 (309-393)||(10793-10877)
[»] scaffold0024 (1 HSPs)
scaffold0024 (309-354)||(83858-83903)
[»] scaffold0194 (1 HSPs)
scaffold0194 (309-357)||(24647-24695)
[»] scaffold0167 (1 HSPs)
scaffold0167 (317-392)||(23590-23665)
[»] scaffold0116 (1 HSPs)
scaffold0116 (309-370)||(8874-8935)
[»] scaffold0015 (1 HSPs)
scaffold0015 (335-393)||(48702-48758)
[»] scaffold0018 (1 HSPs)
scaffold0018 (330-393)||(72935-72999)


Alignment Details
Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 14530301 - 14530385
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  14530301 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaata 14530385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 23397749 - 23397831
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  23397749 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctacgtacaata 23397831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 10543681 - 10543765
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  10543681 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaata 10543765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12024070 - 12023987
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  12024070 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 12023987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 24200777 - 24200693
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  24200777 ttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 24200693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 8455468 - 8455384
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  8455468 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaata 8455384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 5841011 - 5841095
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||| | |||||||||    
T  5841011 ttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaata 5841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 33795268 - 33795350
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| || ||||| ||||||||||| |||||||    
T  33795268 ttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 21779411 - 21779329
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||| | |||||||||    
T  21779411 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgt--aaaacagggtaaggttgcgtacaata 21779329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 7214517 - 7214601
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||| ||| | ||||||||||| |||||||||    
T  7214517 ttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaata 7214601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 11514419 - 11514503
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||||||| ||||| |  |||||||| |||||||||    
T  11514419 ttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaata 11514503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 17667985 - 17668069
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||| | |||||||||| ||||  ||||||||||| |||||||||    
T  17667985 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaata 17668069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 19977866 - 19977782
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||| | |||||||||    
T  19977866 ttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaata 19977782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 17896242 - 17896328
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaatat 394  Q
    ||||||||||||||  |||||||||||| |||||||||| |||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  17896242 ttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatat 17896328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 5450268 - 5450353
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||  ||||| | ||||||||| |||||||||    
T  5450268 ttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaata 5450353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 17623547 - 17623631
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| || || ||||||||||||||||||||| |||||| |||||||||| ||||  ||||||||||| |||||||||    
T  17623547 ttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaata 17623631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 25249889 - 25249806
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||| | ||| ||||||||||| |||||||||    
T  25249889 ttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgt-acaaacagggtaaggctgcgtacaata 25249806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 19614981 - 19615060
Alignment:
Q  315 tcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||| | ||||| |||||||| || ||||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatat 19615060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 9671163 - 9671246
Alignment:
Q  309 ttgttgtcatgtgattg-aaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  9671163 ttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 9671246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 14444720 - 14444785
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggct 14444785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 22371040 - 22371121
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||| |||   ||||| ||||||||||| |||||||||    
T  22371040 ttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctcgtgt---aaaaacagggtaaggctgcgtacaata 22371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 10546153 - 10546230
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| |  ||||| ||||||||||| |||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaata 10546230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 17705478 - 17705562
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |  ||||||||||||||||||||||||||| ||||||||||| || || || ||||||||  ||||||||    
T  17705478 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaata 17705562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 40417023 - 40416939
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||| |||||||| |||||||| | ||||| |||| ||||||  ||||||||    
T  40417023 ttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaata 40416939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 21377225 - 21377142
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    |||||||||||||| |||||||| ||| ||||||||| | |||||| |||||||||| ||||| |||||||||||  |||||||    
T  21377225 ttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaat 21377142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 25641487 - 25641546
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaa 25641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 26684774 - 26684687
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag-cctcttgtgt-caaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||| ||||||||||  ||||||| ||||||||| ||||||||||    
T  26684774 ttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtacaatat 26684687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 29420041 - 29419970
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    |||||||||  ||| |||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||    
T  29420041 ttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 44604837 - 44604907
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    |||||||||||||| || |||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  44604837 ttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaag 44604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 99415 - 99361
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  99415 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt 99361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 23145840 - 23145766
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| |||||||||||||||||||||| || |||||| ||||||||| ||||| || |||||||| |||||||||    
T  23145840 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaata 23145766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 23557630 - 23557556
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| |||||||||||||||||||||| || |||||| ||||||||| ||||| || |||||||| |||||||||    
T  23557630 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaata 23557556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 17380388 - 17380332
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||    
T  17380388 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt 17380332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 27573604 - 27573687
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||  ||||||||||| || ||||||||||||||| | ||| | ||||||||| |||||||||    
T  27573604 ttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgt-ataaacatggtaaggctgcgtacaata 27573687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 387
Target Start/End: Complemental strand, 45235970 - 45235891
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaa-aatagggtaaggctacgt 387  Q
    ||||| |||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||| ||| ||||||||||||||||||    
T  45235970 ttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgt 45235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 25079870 - 25079808
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| || ||||||||||||||||||| | |||||| |||||||||| |||||    
T  25079870 ttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaa 25079808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 39914458 - 39914396
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| || ||||||||||| |||||| ||||||||| |||||||||| |||||    
T  39914458 ttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaa 39914396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 32781425 - 32781356
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| |||||||||  ||||||| |||||||||| ||||| |||||||| || |||||||||    
T  32781425 tgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaata 32781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 4516503 - 4516419
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||||   ||||||| || ||||||||||||||||| ||||| |||| || ||| |||||||||    
T  4516503 ttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgctgcgtacaata 4516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 15296533 - 15296474
Alignment:
Q  335 gggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||| ||||||||||| |||||| ||| | ||||||||||| ||||||||||    
T  15296533 gggttcaagtcccggaaacagcctgttgtgtaaaatacagggtaaggctgcgtacaatat 15296474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 31158593 - 31158522
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    |||||||||||||| |||||||||| ||||| ||||| |  ||||||||||||| || ||||| ||||||||    
T  31158593 ttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaag 31158522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 40762349 - 40762302
Alignment:
Q  346 ctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||    
T  40762349 ctggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaata 40762302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 2003674 - 2003604
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| |||||||||||||||||| |||| ||  ||||| ||||||||| | |||||||||    
T  2003674 tgaaaggtcacgggtacaagtcctggaaacagccccttgcgtaaaaaaacagggtaaggatgcgtacaata 2003604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 14544046 - 14544131
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||| || ||| || || ||||||||||||||||||||  ||||| |||||||| || ||| |||||    
T  14544046 ttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaata 14544131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 30864536 - 30864484
Alignment:
Q  341 aagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  30864536 aagtcatggaaacagcctcttgtgt-aaaaatagggtaagggtgcgtacaatat 30864484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 35017800 - 35017849
Alignment:
Q  309 ttgttgtcatgtga-ttgaaaggtcacgggttcaagtcctggaaacagcc 357  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  35017800 ttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaacagcc 35017849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 30826052 - 30826103
Alignment:
Q  341 aagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | |||||||||    
T  30826052 aagtcttggaaacagcctcttgtgt-aaaaatagggtaaggttgcgtacaata 30826103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 34752815 - 34752759
Alignment:
Q  308 cttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtg 364  Q
    |||||| |||||||| ||||||||||||  ||||||| ||||||||| |||||||||    
T  34752815 cttgttatcatgtgactgaaaggtcacgaattcaagttctggaaacaacctcttgtg 34752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 31821491 - 31821423
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    ||||| |||||| |||||||||||| ||||||||| | ||||||||  | ||||| |||||||||||||||    
T  31821491 gttgttatgtgactgaaaggtcacgagttcaagtcgtagaaacagc--cgtgtgtaaaaaatagggtaagg 31821423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 36871509 - 36871559
Alignment:
Q  342 agtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  36871509 agtcctggaaacagcctcttgtgt-gaaaacagggtaaggctgcgtacaata 36871559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 13245220 - 13245182
Alignment:
Q  327 aaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  13245220 aaggtcacgagttcaagtcctggaaacaacctcttgtgt 13245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 17472954 - 17473016
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||  |||||||||||||||||||||| ||| | |||| ||||| |||||| |||||    
T  17472954 ttgttgtcaaatgattgaaaggtcacgggttcaggtcttagaaatagcctattgtgtaaaaaa 17473016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 44521525 - 44521451
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||| ||| |||| |||||||||||| |||||| || ||||||||  ||||||||| ||||| | |||||||||    
T  44521525 ttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggct 44521451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 4852364 - 4852311
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtg 364  Q
    ||||||||||||  |||| |||| |||||||||||||| |||||| ||||||||    
T  4852364 gttgtcatgtgaccgaaaagtcaggggttcaagtcctgcaaacagtctcttgtg 4852311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 24860138 - 24860077
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||||| || ||||| ||||||| ||| |||||||||| ||||| |||| ||||    
T  24860138 ttgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaa 24860077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 21646947 - 21647032
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21646947 ttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatat 21647032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 39077946 - 39077863
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| | ||||||||||    
T  39077946 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggttgcgtacaatat 39077863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 48598975 - 48598893
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  48598975 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 48598893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 5648242 - 5648325
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  5648242 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 5648325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 6430777 - 6430694
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  6430777 ttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 6430694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 16408755 - 16408671
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||    
T  16408755 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 16408671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 41018945 - 41018862
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaattagggtaaggctacgtacaata 41018862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 47528680 - 47528598
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  47528680 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 47528598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 7385628 - 7385556
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaagg 7385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 17043546 - 17043462
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  17043546 ttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaata 17043462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 19027831 - 19027915
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||| |||||||||    
T  19027831 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaata 19027915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 20224967 - 20225049
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||  |||| ||||||||||| |||||||||    
T  20224967 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt--aaaacagggtaaggctgcgtacaata 20225049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 5306811 - 5306732
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| | |||||||||    
T  5306811 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaatcagggtaaggttgcgtacaata 5306732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 16911545 - 16911629
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||  |||  ||||||||||| |||||||||    
T  16911545 ttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaata 16911629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 30639363 - 30639446
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  30639363 ttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggtaaggctgcgtacaata 30639446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 40915812 - 40915895
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  40915812 ttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacaaggtaaggctgcgtacaata 40915895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 47443956 - 47444024
Alignment:
Q  325 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaata 47444024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 42164300 - 42164227
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  42164300 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-aaaaacagggtaaggct 42164227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 44363284 - 44363202
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||| ||||| |||||| |||| |||||||    
T  44363284 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaa 44363202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 9832463 - 9832381
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||  |||| ||||||||||| |||||||||    
T  9832463 ttgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 9832381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 11054298 - 11054216
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||  |||| |||||||| || |||||||||    
T  11054298 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt--aaaacagggtaagactgcgtacaata 11054216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 54175046 - 54175130
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctgg-aaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| ||||| ||||||||||| |||||||||    
T  54175046 ttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 54175130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 487287 - 487203
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||  |||| | ||||| ||| |||||||||    
T  487287 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaata 487203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 14983817 - 14983889
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||| |||||| |||||||||| |||||||| | ||||||||||||||||| |||||||||||||||    
T  14983817 ttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaagg 14983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 7038041 - 7038119
Alignment:
Q  314 gtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||| || |||||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaata 7038119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 25463108 - 25463167
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaa 25463167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 30690333 - 30690271
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaata 373  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  30690333 gttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaata 30690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 35567153 - 35567227
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||| | |||||||||| ||||||||||| ||||||||||| ||||||| ||||| |||||||||||    
T  35567153 ttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggct 35567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 14590820 - 14590905
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |  ||||| ||||||||||| | |||||||    
T  14590820 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaata 14590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 37494834 - 37494919
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||| |||| || ||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| | | ||||||||    
T  37494834 ttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatat 37494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 49938742 - 49938681
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  49938742 ttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 49938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 54730232 - 54730317
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||   |||||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||| |||| ||||    
T  54730232 ttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataata 54730317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 10660387 - 10660471
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||| ||  |||||||||||||||||| |||||| ||| |||||||||||| |||| | |||||||    
T  10660387 ttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaata 10660471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 10874532 - 10874616
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||| ||  |||||||||||||||||| |||||| ||| |||||||||||| |||| | |||||||    
T  10874532 ttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaata 10874616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 25343170 - 25343254
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||| ||||||| ||||||||| ||||||| || ||||||||| ||||| ||||||||||| |||||||||    
T  25343170 ttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaata 25343254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 29208039 - 29207966
Alignment:
Q  318 tgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||  |||| ||||||||||| |||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgt--aaaacagggtaaggctgcgtacaata 29207966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 17315450 - 17315377
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||| | |||||||||    
T  17315450 ttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgt-aaaaacaaggtaaggct 17315377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 43035231 - 43035305
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||| | ||| | |||||||||    
T  43035231 ttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggct 43035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 54640491 - 54640429
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  54640491 ttgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 23501776 - 23501854
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||      |||||||||||||| ||||| ||||||||| | |||||||||    
T  23501776 ttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaaggttgcgtacaata 23501854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 12257745 - 12257689
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||    
T  12257745 ttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgt 12257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 30496472 - 30496416
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||    
T  30496472 ttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgt 30496416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 32629418 - 32629366
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgt 32629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 39029213 - 39029129
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| ||||| | ||||||||  |||||||| | ||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  39029213 ttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaata 39029129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 54967004 - 54967076
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||||||| |||||||||||  |||||||| ||||||| | |||||||||| ||||| |||||||||    
T  54967004 ttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaagg 54967076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 5313146 - 5313099
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagc 356  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  5313146 ttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaacagc 5313099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 13256549 - 13256469
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||  |||||||||||||||    ||||||||||| ||||| ||||||||||| |||||||||    
T  13256549 ttgttgtcatgtgactggaaggtcataggttcaagtcctgga----gcctcttgtgtaaaaaacagggtaaggctgcgtacaata 13256469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 23580360 - 23580293
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaataggg 376  Q
    ||||||||| |||| ||||||||||||||||||||| || |||| |||||||||||| ||||| ||||    
T  23580360 ttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggg 23580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 20639777 - 20639727
Alignment:
Q  343 gtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 20639727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 30352743 - 30352681
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||||| ||||  |||||||||||||||  |||||||||||||||||||||||| |||||    
T  30352743 ttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 32478937 - 32478864
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||||||||||  || ||||||| ||||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  32478937 ttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgt-aaaaacagggtaaggct 32478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 47441682 - 47441598
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||| |||||||||||  ||||||| ||||| ||| ||||  |||||||||||  ||||||||    
T  47441682 ttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaata 47441598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 9987957 - 9987902
Alignment:
Q  338 ttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| | |||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaata 9987902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 41549376 - 41549421
Alignment:
Q  320 tgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  41549376 tgattgaaatgtcacgggttcaagttctggaaacaacctcttgtgt 41549421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 8473772 - 8473716
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||||||| |||  | |||||  ||||||||||||||||||||||||||||||||    
T  8473772 ttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt 8473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 10277886 - 10277825
Alignment:
Q  330 gtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||| |||| ||||||||||||||| |  |||||||| ||||||| |||||||||    
T  10277886 gtcacgggttcaaatccttgaaacagcctcttgtat--aaaataggataaggctgcgtacaata 10277825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 50856388 - 50856344
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaac 353  Q
    |||||||||  |||||||||||||||||||||||||||| |||||    
T  50856388 ttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 25629069 - 25629116
Alignment:
Q  346 ctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||||||||| |||||||||||||||||  ||||||||    
T  25629069 ctggaaacagtctcttgtgtaaaaaatagggtaaggctgtgtacaata 25629116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 371
Target Start/End: Original strand, 36589753 - 36589788
Alignment:
Q  336 ggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||||||||||||||||||| |||||    
T  36589753 ggttcaagtcctggaaacagcctcttgtgtaaaaaa 36589788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 49938590 - 49938508
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    ||||||||| |||| ||||||||||| | |||||||| ||||| |||| | |||||| ||||| ||||||||||| ||| ||||    
T  49938590 ttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgt-aaaaacagggtaaggctgcgtccaat 49938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 379
Target Start/End: Original strand, 7227715 - 7227785
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    |||||||||||||| ||||| |||| | |||||| | | ||||||| || ||||||| |||||||||||||    
T  7227715 ttgttgtcatgtgactgaaaagtcatgagttcaaattcaggaaacaaccgcttgtgttaaaaatagggtaa 7227785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 21489099 - 21489153
Alignment:
Q  338 ttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    ||||||||||||||||||||||||| || ||||| || ||||| || ||||||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaat 21489153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 30581602 - 30581557
Alignment:
Q  326 aaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||| ||||||||||| |||||||| |||||||||| |||||    
T  30581602 aaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaa 30581557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 393
Target Start/End: Original strand, 44357218 - 44357287
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| | ||||||||||| |||||| ||| |||||| | |||||| ||||| | ||||||||||    
T  44357218 tgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaata 44357287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 51420556 - 51420641
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacggg-ttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||   | |||||||| |||||||| ||||||||||  |||| |||||||||||  ||||||||    
T  51420556 ttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaaggctgggtacaata 51420641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 55830873 - 55830816
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgg-gttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||||||||| | |||||||||| ||||||||  ||||||||| |||||||||    
T  55830873 ttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgt 55830816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28817778 - 28817694
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  28817778 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 28817694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 36720779 - 36720863
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  36720779 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 36720863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12670400 - 12670318
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  12670400 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 12670318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 18164911 - 18164828
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||    
T  18164911 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggttgcgtacaata 18164828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 39461148 - 39461064
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  39461148 ttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaata 39461064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 45071248 - 45071331
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  45071248 ttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 45071331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 30962925 - 30962851
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| |||||    
T  30962925 ttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggct 30962851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 20869648 - 20869566
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||  ||||||||    
T  20869648 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgtgtacaata 20869566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 26954115 - 26954200
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||    
T  26954115 ttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaata 26954200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 6760805 - 6760889
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  6760805 ttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaata 6760889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 8897916 - 8897832
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||  | ||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  8897916 ttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaata 8897832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 13160685 - 13160768
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||    
T  13160685 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 13160768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 29521837 - 29521753
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||    
T  29521837 ttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaata 29521753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 20284225 - 20284139
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |   ||||| ||||||||||| |||||||||    
T  20284225 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaata 20284139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 21070854 - 21070767
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt---caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    ||||| ||||||||||| |||||||||    
T  21070854 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaata 21070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 28407399 - 28407471
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggc 382  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28407399 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggc 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 30454247 - 30454169
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtac 389  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||| |||||    
T  30454247 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacaaggtaaggctgcgtac 30454169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 42083851 - 42083770
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||| ||||||    
T  42083851 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtaca 42083770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 7136681 - 7136597
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||| |||||||||||||||||||| |||||||||| ||||  ||||||||||| |||||||||    
T  7136681 ttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaata 7136597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 22598140 - 22598224
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||  ||| ||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  22598140 ttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaata 22598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 25250505 - 25250589
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||  |||||||||||||||||||||| |||||| |||||||||||| |||| |||||||||    
T  25250505 ttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaata 25250589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 35261662 - 35261746
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| | |||||||||    
T  35261662 ttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaata 35261746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 2626502 - 2626564
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2626502 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 17823559 - 17823620
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17823559 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 17823620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 14018121 - 14018037
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||| ||||| || || |||||||||    
T  14018121 ttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgtacaata 14018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 31457156 - 31457239
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||| |||||||||  |||||| |||||||||    
T  31457156 ttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgt-aaaaataggaaaaggctgcgtacaata 31457239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 35105906 - 35105990
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||| ||| | || |||||||| |||||||||    
T  35105906 ttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaata 35105990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 44530136 - 44530216
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| |  ||||||||||||||||||| |||||||| |||||||||| ||||| ||||||||||| |||||||||    
T  44530136 tgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaata 44530216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 44781658 - 44781574
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||| |||||||||||||||||||||||| |||||||||| ||| | |||||||||||  ||||||||    
T  44781658 ttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaata 44781574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 5135418 - 5135357
Alignment:
Q  332 cacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaata 5135357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 11748282 - 11748367
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||| ||||  |||||||| |  ||||||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaatat 11748367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 24365212 - 24365127
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaat-agggtaaggctacgtacaata 393  Q
    |||||||||||||| | ||| |||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||| || ||||||    
T  24365212 ttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaata 24365127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 389642 - 389712
Alignment:
Q  325 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtc--aaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||| | |||||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaata 389712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 24245434 - 24245478
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaac 353  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  24245434 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 8484069 - 8484006
Alignment:
Q  330 gtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| |||||||||||||||||||| |||||||||| ||||| |||| |||||| |||||||||    
T  8484069 gtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaata 8484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 23000365 - 23000309
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaa 23000309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 44742671 - 44742587
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||  ||||||| ||||||| | |||||||| |||||||||  ||| ||||| ||||| ||||||||||| |||||||||    
T  44742671 ttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtacaata 44742587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 29877111 - 29877161
Alignment:
Q  343 gtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||||||    
T  29877111 gtcctggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaata 29877161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 20869941 - 20869990
Alignment:
Q  344 tcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaata 20869990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 17251001 - 17250945
Alignment:
Q  337 gttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| ||||||||||||| ||||| ||| ||||||  |||||||||    
T  17251001 gttcaagtcctggaagcagcctcttgtgtaaaaaacaggttaaggcagcgtacaata 17250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 12625891 - 12625934
Alignment:
Q  328 aggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||| |||||||||||||||| |||||||||| |||||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaa 12625934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 43942348 - 43942391
Alignment:
Q  350 aaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  43942348 aaacagcctcttatgtcaaaaacagggtaaggctgcgtacaata 43942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 5689640 - 5689698
Alignment:
Q  335 gggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| || ||| |||||||||||| ||||  ||||||||||| |||||||||    
T  5689640 gggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaata 5689698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 11001102 - 11001040
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||||||||||||| ||||||||| | ||| ||||| |||  ||||| |||||    
T  11001102 ttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacctactgtgtaaaaaa 11001040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 27635020 - 27635058
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacag 355  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  27635020 atgtgactgaaatgtcacgggttcaagtcctggaaacag 27635058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 40605057 - 40604973
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| | | | | ||||||||||| ||||||||  || |||||| |||||| || ||||| | |||||||||    
T  40605057 ttgttgtcatgtgattggatgattatgggttcaagtcatggaaacaatcttttgtgtaaaaaattggataaggttgcgtacaata 40604973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 19427041 - 19426957
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  19427041 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaata 19426957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 46354177 - 46354261
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||    
T  46354177 ttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaata 46354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 10693223 - 10693141
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  10693223 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaagagggtaaggctgcgtacaata 10693141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 42805507 - 42805591
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  42805507 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaata 42805591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 43557455 - 43557539
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  43557455 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaata 43557539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 47716442 - 47716526
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  47716442 ttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 47716526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 2541172 - 2541091
Alignment:
Q  309 ttgttgtcatgtgattg-aaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtac 389  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  2541172 ttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 2541091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 21172159 - 21172077
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  21172159 ttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 21172077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 42391250 - 42391168
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||| |||||||||    
T  42391250 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtacaata 42391168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 11617740 - 11617656
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||| || |||||||||    
T  11617740 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaata 11617656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 16341261 - 16341345
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||| ||||||  |||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||    
T  16341261 ttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaata 16341345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 29907408 - 29907486
Alignment:
Q  315 tcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  29907408 tcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaata 29907486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 32758244 - 32758326
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||  ||||||||    
T  32758244 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgtgtacaata 32758326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 27629617 - 27629689
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  27629617 ttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagg 27629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 33872061 - 33871978
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||| ||| ||||||| |||||||||    
T  33872061 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgt-aaaaacaggataaggctgcgtacaata 33871978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 42798652 - 42798736
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||| ||||| | ||||||||| |||||||||    
T  42798652 ttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaata 42798736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 5180309 - 5180238
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    |||||||||||||| |||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||    
T  5180309 ttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 7644939 - 7645010
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  7644939 ttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 7645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 7193068 - 7193142
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| || |||| |||||||||    
T  7193068 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaaggct 7193142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 11741778 - 11741860
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||| ||| ||||  |||||||||||||||| |||||||||    
T  11741778 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgt--aaaatagggtaaggctgcgtacaata 11741860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 47078005 - 47077923
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||| |||| | | |||||||||    
T  47078005 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgt--aaaatagagtaaagttgcgtacaata 47077923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 12473287 - 12473371
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||   |||||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||| | |||||||||    
T  12473287 ttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaata 12473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 18512588 - 18512521
Alignment:
Q  325 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| |||||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 18512521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 19265798 - 19265881
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||| ||||||| ||||| ||||||||||| |||||||||    
T  19265798 ttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggctgcgtacaata 19265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 22699122 - 22699038
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||| | |||||||||||||||||| || ||||||||| ||||| |||||||| || |||||||||    
T  22699122 ttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaata 22699038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 23419822 - 23419742
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| | ||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  23419822 tgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 23419742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 34626359 - 34626276
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||| ||||| ||||||||||| ||| |||||    
T  34626359 ttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgt-aaaaacagggtaaggctgcgttcaata 34626276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 42495987 - 42495916
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  42495987 ttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtat-aaaaacagggtaagg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 18327017 - 18327090
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| |  |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  18327017 ttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaaggct 18327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 394
Target Start/End: Original strand, 35203433 - 35203507
Alignment:
Q  320 tgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||| |||| || ||||||||||    
T  35203433 tgattgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatat 35203507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 48735273 - 48735190
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcc-tggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||  |||| | ||||||||| |||||||||    
T  48735273 ttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgt--aaaacacggtaaggctgcgtacaata 48735190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 14099158 - 14099074
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||| |||||||||||| ||||| |||||| ||||| ||| |||| || |||||||||    
T  14099158 ttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaata 14099074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 14409175 - 14409091
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||| |||||||||||| ||||| |||||| ||||| ||| |||| || |||||||||    
T  14409175 ttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaata 14409091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 19266433 - 19266517
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||  |||||||||||||| ||| |||| |||| || ||||| ||||||||||| |||||||||    
T  19266433 ttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaata 19266517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28362297 - 28362213
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||  ||||||||||| |||||||||||| ||||| ||||||||||| |||||   ||||||||| |||||||||    
T  28362297 ttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaata 28362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 336 - 393
Target Start/End: Complemental strand, 2663058 - 2663003
Alignment:
Q  336 ggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  2663058 ggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctgcgtacaata 2663003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 7794658 - 7794596
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||| |||||    
T  7794658 ttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaa 7794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 7879639 - 7879705
Alignment:
Q  327 aaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||| | ||||||||| |||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaata 7879705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 14732974 - 14732900
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||||   ||| ||||| |||||||||||    
T  14732974 ttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggct 14732900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 38262340 - 38262278
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaa 38262278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 48123636 - 48123566
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||| || || |||||||    
T  48123636 ttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaa 48123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 32233286 - 32233214
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggc 382  Q
    |||||||||  ||| |||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggc 32233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 42476856 - 42476938
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| | ||||||||||| ||||||| |||||||||| |||||||||  |||| | ||||||||| |||||||||    
T  42476856 ttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgt--aaaacaaggtaaggctgcgtacaata 42476938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 13805085 - 13805141
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||    
T  13805085 ttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgt 13805141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 40463860 - 40463943
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||| | ||||||| ||||||||| |||||  |||||||||| |||| ||||    
T  40463860 ttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgt-aaaaactgggtaaggctgcgtataata 40463943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 5814454 - 5814528
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||| ||||||||| || |||||||||||||||  |||||| | |||||| ||| |||||||||||||||||    
T  5814454 ttgttgttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 5814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 18747472 - 18747554
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa-tagggtaaggctacgtacaata 393  Q
    |||||| |||| |||||||||||||| ||||||| |||||||||||| |||||| |||||  ||||||||||| |||| ||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataata 18747554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 21447573 - 21447635
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||| |||| |||||||||| |||||||| || |||||||||||||||| |||||    
T  21447573 ttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttgtgtaaaaaa 21447635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 31591244 - 31591177
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| |||||||||||||||||| ||||||||||  |||| || |||||||| |||||||||    
T  31591244 tgaaaggtcacgagttcaagtcctggaaacaacctcttgtgt--aaaacagagtaaggctgcgtacaata 31591177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 8149098 - 8149013
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtg-tcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || || |||||| |||||||||||| ||||  ||||||||| | ||||||||||||||| | |||||||||    
T  8149098 ttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaata 8149013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 35334966 - 35334884
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||  ||| |||| ||||| |||||||| ||  ||||||||    
T  35334966 ttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacag--tctcgtgtaaaaaacagggtaagactgtgtacaata 35334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 44123769 - 44123712
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||| |||||| | |||||||||||| |||||||||||||||||||| ||||    
T  44123769 tgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaa 44123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 1424062 - 1423992
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    ||||||| |||||| || |||||||||| ||||| |||||||||||| || |||||| ||||| |||||||    
T  1424062 ttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaa 1423992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 6736873 - 6736927
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    ||||||||||| || ||||||||||||||||||||||||  ||||| ||||||||    
T  6736873 ttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgt 6736927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 28078283 - 28078237
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag 355  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||    
T  28078283 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 28078237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 39123873 - 39123934
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||||| ||||| | |||||||||||||||| ||||| | ||||||||| ||||    
T  39123873 ttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaa 39123934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 38604546 - 38604593
Alignment:
Q  345 cctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  38604546 cctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 38604593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 393
Target Start/End: Original strand, 1408469 - 1408524
Alignment:
Q  338 ttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| |||||||||||| ||||| | |||||||||  ||||||||    
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaata 1408524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 43852047 - 43852109
Alignment:
Q  330 gtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||| ||| | |||||| ||| ||||| |||||||||||| ||||||||    
T  43852047 gtcacgggttcaagtcctgaaaaaa-cctcttctgtaaaaaacagggtaaggctatgtacaata 43852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 3469331 - 3469269
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| ||||||||||| |  ||||||||| ||||||  ||||||||| |||||    
T  3469331 ttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaa 3469269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 42102037 - 42101967
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    ||||||||| |||| || |||||||   |||||||||||||||||||||||||  || ||||| |||||||    
T  42102037 ttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaa 42101967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12222069 - 12221985
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  12222069 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 12221985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 29356009 - 29355925
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaata 29355925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 1346947 - 1347029
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||| |||||||||    
T  1346947 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgt--aaaacagggtaaggctgcgtacaata 1347029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 1354907 - 1354825
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  1354907 ttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 1354825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 8409226 - 8409310
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  8409226 ttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaata 8409310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 9161106 - 9161189
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  9161106 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaaacagagtaaggctgcgtacaata 9161189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 2166564 - 2166480
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||| | ||| ||||| | |||||||||    
T  2166564 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaata 2166480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 2178197 - 2178113
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||| | ||| ||||| | |||||||||    
T  2178197 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaata 2178113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 3815229 - 3815145
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| || |||||| ||||||| |||| | || |||||||||    
T  3815229 ttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaata 3815145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 6024216 - 6024300
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||| ||||| | |||||| || |||||||||    
T  6024216 ttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaata 6024300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 13905131 - 13905048
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||| | ||||||    
T  13905131 ttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaat 13905048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 14553495 - 14553568
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| | ||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  14553495 ttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggct 14553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 14975232 - 14975170
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| || |||||||||| |||||||||||||||||||||||||||| |||||    
T  14975232 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaa 14975170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 12889409 - 12889493
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||| |||||||||| || |||||||||||||||| ||||| |||| |||||| | |||||||    
T  12889409 ttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcatacaata 12889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 15866189 - 15866110
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgta 388  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||  || ||||| ||||||| ||| ||||    
T  15866189 ttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctgcgta 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 20400650 - 20400731
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    |||||||||||||| ||||||||||| |||||||||  ||||||||  ||||||||| ||||| |||||||| || ||||||    
T  20400650 ttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtaca 20400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 28007628 - 28007693
Alignment:
Q  326 aaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||| ||||| ||||| |||||||||    
T  28007628 aaaggtcacgggttcaagtcctggaaagagcctcttgtgt--aaaacagggtcaggctgcgtacaata 28007693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 17432332 - 17432395
Alignment:
Q  318 tgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    ||||| ||||||||||| ||||||||||||||||||| | |||||||| ||||| |||||||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 17432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 394
Target Start/End: Complemental strand, 23240971 - 23240891
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||    
T  23240971 ttgtcacgtgactgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgt--aaaacagggtaagtttgcgtacaatat 23240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 7947514 - 7947440
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| ||||||||||| ||||||| ||||||||||| |||| ||||| ||||  ||||||||||| |||||||||    
T  7947514 gtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaata 7947440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 18277343 - 18277273
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||| ||||| | ||||||||||||||||| || ||||||||||||||||||| ||||  |||||||||    
T  18277343 gttgtcctgtgactaaaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaagg 18277273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 17448316 - 17448389
Alignment:
Q  318 tgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    |||||||||||||||||||||||||||  || ||||| | | |||||| ||||| ||||||||||| |||||||    
T  17448316 tgtgattgaaaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggctgcgtacaa 17448389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 32728308 - 32728223
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    |||||||||||||| ||||||||||| | |||||||  |||||||| |||||| ||| ||||| |||||||| ||  |||||||||    
T  32728308 ttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatat 32728223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 1941838 - 1941922
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| || |||||| ||| || ||||| || ||||| |||||||||| ||||| ||||||||||| |||||||||    
T  1941838 ttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaata 1941922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 2755576 - 2755492
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||   |||||||||| || ||||| |||||| |  |||||||||| ||||||| |||||||||    
T  2755576 ttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaacatcctcttataccaaaaataggctaaggctgcgtacaata 2755492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 12063450 - 12063504
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    ||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  12063450 ttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgt 12063504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 24097568 - 24097638
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||| | |||||||||||| ||| ||||||| ||| ||||||||||| | ||||| |||||||||||    
T  24097568 tgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggct 24097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 33138838 - 33138900
Alignment:
Q  331 tcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||| |||||||| | ||||| || |||||||  |||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaata 33138900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 22967157 - 22967227
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||||||| || ||||||||  ||||||||| |||||||| | |||||||| ||||||||| |||||||    
T  22967157 ttgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaataggataaggct 22967227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 23821236 - 23821166
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||||||| || ||||||||  ||||||||| |||||||| | |||||||| ||||||||| |||||||    
T  23821236 ttgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaataggataaggct 23821166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 24734616 - 24734678
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| ||||||||||   |||||| |||| |||||| |||||||||| |||||    
T  24734616 ttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 25557743 - 25557790
Alignment:
Q  344 tcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  25557743 tcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 25557790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 26097178 - 26097225
Alignment:
Q  344 tcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  26097178 tcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 26097225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 32579436 - 32579492
Alignment:
Q  336 ggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||| || | ||||||| |||||| || |||||||||    
T  32579436 ggttcaagtcctggaaacagcctctggtat-aaaaatacggtaagcctgcgtacaata 32579492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 15865992 - 15865956
Alignment:
Q  325 gaaaggtcacgggttcaagtcctggaaacagcctctt 361  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  15865992 gaaaggtcatgggttcaattcctggaaacagcctctt 15865956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 24448873 - 24448957
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  24448873 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaata 24448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 38879564 - 38879648
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||    
T  38879564 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaata 38879648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 4619258 - 4619174
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||    
T  4619258 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 4619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 27328735 - 27328819
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  27328735 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaata 27328819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 41014302 - 41014385
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  41014302 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 41014385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 37024706 - 37024626
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  37024706 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 32703411 - 32703489
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 32703489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 35710296 - 35710378
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||    
T  35710296 ttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctgcgttcaata 35710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 43334185 - 43334270
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||| |||||||||    
T  43334185 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaata 43334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 23974763 - 23974837
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  23974763 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggct 23974837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 8170134 - 8170052
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||| |||||||||    
T  8170134 ttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt--aaaacagggtaaggctgcgtacaata 8170052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 22025541 - 22025600
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  22025541 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 22025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12006482 - 12006398
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacggg-ttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||| |||||| ||| ||||||||||||||||| | |||||||    
T  12006482 ttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatacaata 12006398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 22187268 - 22187352
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||| ||||| | | |||| || |||||||||    
T  22187268 ttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaata 22187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 28516586 - 28516502
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||  |||||||||||||||||||||| |||||||| |||||||||| ||||| ||| || |||| |||||||||    
T  28516586 ttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaata 28516502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 1405168 - 1405254
Alignment:
Q  307 ccttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||| |||||| | | |||||||| |||||  | |||||||||    
T  1405168 ccttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaata 1405254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 1565414 - 1565476
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  1565414 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaa 1565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 13801895 - 13801837
Alignment:
Q  335 gggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 13801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 1850624 - 1850684
Alignment:
Q  310 tgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||| ||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaa 1850684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 39301106 - 39301178
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||||| | |||||||||||||||||||||| ||| |||| ||||||||||  |||| |||||||||    
T  39301106 ttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagg 39301178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 42924977 - 42924902
Alignment:
Q  318 tgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||| |||||||||||| |||||||||||| ||||| | |||||||| ||||| ||||||||| | |||||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaata 42924902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 209079 - 209006
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| | |||||||||  ||||||||||||| |||| |||||||||| ||||| |||||||||||    
T  209079 ttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgt-aaaaacagggtaaggct 209006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 19143094 - 19143014
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    ||||||||| |||| | ||| | ||| ||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||    
T  19143094 ttgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggctgcgtaca 19143014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 394
Target Start/End: Original strand, 43574609 - 43574674
Alignment:
Q  329 ggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaatat 394  Q
    ||||||| ||||||||||||||||||  |||||||||  |||| ||||||||||| ||||||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatat 43574674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 18698596 - 18698648
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    ||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||    
T  18698596 gttgtcacgtgattgaacggtcacgggttcaagtactgaaaacagcctcttgt 18698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 22861818 - 22861762
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||||||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  22861818 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgt 22861762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 10634298 - 10634224
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaat-agggtaaggct 383  Q
    ||||||||| |||| |||||||||| ||||||||||||| |||||| |||| |||| ||||||| |||||||||||    
T  10634298 ttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctcgtgtg-caaaaatcagggtaaggct 10634224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 22908014 - 22907955
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||| |||||| |||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaa 22907955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 24903848 - 24903777
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaag 380  Q
    ||||||||| |||| ||||| |||| |||  ||||||||| ||||||||| |||||| ||||||||||||||    
T  24903848 ttgttgtcacgtgactgaaaagtcatgggcacaagtcctgaaaacagccttttgtgtaaaaaatagggtaag 24903777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 9794511 - 9794465
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag 355  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||    
T  9794511 ttgttgtcatgtgatcaaaaggtcacgggttcaagtcctgaaaacag 9794465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 34074714 - 34074652
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||  ||| |||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  34074714 ttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaa 34074652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 2838761 - 2838845
Alignment:
Q  309 ttgttgtcatgtgattg-aaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||| | |||||||   |||||||| |||||||| ||||| ||||||||||| |||||||||    
T  2838761 ttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgt-aaaaacagggtaaggctgcgtacaata 2838845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 5873441 - 5873393
Alignment:
Q  341 aagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  5873441 aagtcgtggaaacagcctcttgtgt-aaaaatagggtaaggctaagtaca 5873393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 7368413 - 7368463
Alignment:
Q  341 aagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  7368413 aagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 7368463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 20135623 - 20135671
Alignment:
Q  345 cctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaata 20135671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 22600437 - 22600521
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||| |||||||| || ||||| ||||||||||||||||||||||   | |||||| ||| | |||||||||||  ||||||||    
T  22600437 ttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaata 22600521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 356
Target Start/End: Original strand, 17419897 - 17419944
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagc 356  Q
    ||||||| |||||| |||||||| ||| ||||||||||||||||||||    
T  17419897 ttgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacagc 17419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 29334415 - 29334462
Alignment:
Q  346 ctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaata 29334462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 39079918 - 39079875
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaa 352  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||    
T  39079918 ttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 41425952 - 41426015
Alignment:
Q  330 gtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| ||||||||| | | |||||| ||||| ||||||||||| | |||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaata 41426015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 16880757 - 16880715
Alignment:
Q  351 aacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||    
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 16880715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 31299615 - 31299669
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    |||||||||||||| | | |||||||  ||||||||||| |||||||||||||||    
T  31299615 ttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttgt 31299669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 31362487 - 31362454
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaa 342  Q
    ||||||||||||||||| ||||||||||||||||    
T  31362487 ttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 4809992 - 4810076
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||  ||| | |||| ||| || |||||||||| ||||||  ||||||||||||||||||| |||| || | |||||||    
T  4809992 ttgttgtcacatgagtaaaagatcatggattcaagtccttgaaacaatctcttgtgtcaaaaataggttaagactgcatacaata 4810076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 8247841 - 8247757
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||    
T  8247841 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaata 8247757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 13628944 - 13628860
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||||    
T  13628944 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaata 13628860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 46421189 - 46421105
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  46421189 ttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 46421105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 516417 - 516498
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaata 516498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 13730756 - 13730672
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  13730756 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaata 13730672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 26573132 - 26573216
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||    
T  26573132 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaata 26573216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 29366874 - 29366790
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||    
T  29366874 ttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaata 29366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 34420796 - 34420716
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtac 389  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  34420796 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 34420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 10870103 - 10870025
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgta 388  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  10870103 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 26869712 - 26869795
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||    
T  26869712 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgtacaata 26869795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 40272964 - 40272880
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||    
T  40272964 ttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaata 40272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 1217095 - 1217177
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  1217095 ttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 1217177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 7697037 - 7696955
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| |||||||||    
T  7697037 ttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctgcgtacaata 7696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 22123067 - 22122985
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||  |||| ||||||||||| |||||||||    
T  22123067 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctgcgtacaata 22122985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 30928296 - 30928227
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  30928296 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 30928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 45620981 - 45620896
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||| |||||||||    
T  45620981 ttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaata 45620896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 378
Target Start/End: Original strand, 53062043 - 53062112
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggta 378  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  53062043 ttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 4495816 - 4495732
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||||| |||||||||    
T  4495816 ttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaata 4495732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 9607208 - 9607292
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||||||| || ||||| ||||||||||| |||| ||||    
T  9607208 ttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaata 9607292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 22609771 - 22609854
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  22609771 ttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 22609854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 54032705 - 54032627
Alignment:
Q  315 tcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| || |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| | |||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaata 54032627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 5173872 - 5173811
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  5173872 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 39203521 - 39203603
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||||| | |||||||||    
T  39203521 ttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgt--aaaacagggtaaggttgcgtacaata 39203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 54374488 - 54374415
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    |||| ||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||    
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaat 54374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 7942995 - 7943079
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||| |||||| | ||||| |||||||| || |||||||||    
T  7942995 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaata 7943079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12914187 - 12914103
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| ||||||  ||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||    
T  12914187 ttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaata 12914103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 19731007 - 19731091
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||| ||||| | ||||||| | |||||||||    
T  19731007 ttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaata 19731091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 52926362 - 52926306
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  52926362 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt 52926306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 53996718 - 53996634
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||||| ||||| ||||||||||| | |||||||    
T  53996718 ttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaata 53996634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 33926094 - 33926171
Alignment:
Q  315 tcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgt-aaaaacagggtaaggctgtgtacaata 33926171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 45948972 - 45948906
Alignment:
Q  327 aaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| | |||||||    
T  45948972 aaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaata 45948906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 10795554 - 10795493
Alignment:
Q  332 cacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaata 10795493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 14986989 - 14987046
Alignment:
Q  336 ggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 14987046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 6411973 - 6411890
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| | ||| |||||| ||||||||||| || |||||||||||||||| ||||| ||||||||||| |||||||||    
T  6411973 ttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 6411890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 12525414 - 12525486
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||| ||||  |||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 16735446 - 16735529
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || || |||||||||||||||||| |||||||||||||||   ||||| ||||||||||| |||||||||    
T  16735446 ttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgt-agaaaaacagggtaaggctgcgtacaata 16735529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 26782374 - 26782441
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaa 379  Q
    |||||||| |||||||||||||||| |||||||||| ||||||  ||||||||| |||||||||||||    
T  26782374 ttgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaaatagggtaa 26782441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 45139624 - 45139546
Alignment:
Q  315 tcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||| |||||||||||||||||||||  |||||||| |||||||||| ||| | ||||||||||| | |||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaata 45139546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 19751586 - 19751667
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||| |||||||||||||||||| | ||||||||||||| |||||||||||| ||||  | ||||||| | |||||||||    
T  19751586 ttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaata 19751667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 31592878 - 31592936
Alignment:
Q  333 acgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  31592878 acgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 31592936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 25944474 - 25944558
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||| |||||| |||| |||||  ||| ||||||  ||||||||    
T  25944474 ttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaata 25944558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 29106555 - 29106638
Alignment:
Q  310 tgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||  | |||| |||||||| |||||| || ||||| |||||||||| ||||||||| ||||| |||||||||||    
T  29106555 tgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtacaata 29106638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 35417921 - 35417988
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaataggg 376  Q
    ||||| |||||||| ||| |||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  35417921 ttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 52428615 - 52428545
Alignment:
Q  324 tgaaaggtcacgggttcaagtc-ctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| ||| | ||||||||||| |||||||||    
T  52428615 tgaaaggtcacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaata 52428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 39212003 - 39212079
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||| ||||| ||||||||||||||||||||||| | |||||||||| || || | |||||| || |||||||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaata 39212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 383
Target Start/End: Complemental strand, 8411016 - 8410945
Alignment:
Q  310 tgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||| || ||||||||||| |||||| ||||||||||| |||||  |||| ||||| |||||||||||    
T  8411016 tgttgtcatgggactgaaaggtcaccggttcaggtcctggaaactgcctc--gtgtaaaaaacagggtaaggct 8410945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 49013589 - 49013543
Alignment:
Q  347 tggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  49013589 tggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 49013543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 4537036 - 4537085
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcct 358  Q
    |||| |||||||||||||||||||||||||| ||||  ||||||||||||    
T  4537036 ttgtggtcatgtgattgaaaggtcacgggtttaagttttggaaacagcct 4537085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 45786327 - 45786284
Alignment:
Q  350 aaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||    
T  45786327 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 45786284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 9276284 - 9276353
Alignment:
Q  330 gtcacgggttcaagtcctggaaaca------gcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| ||||||||||||||||||||      ||||||||||| ||||| ||||||||||| |||||||||    
T  9276284 gtcatgggttcaagtcctggaaacaacctcagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 9276353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 371
Target Start/End: Complemental strand, 43114994 - 43114960
Alignment:
Q  337 gttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    ||||||||||||||||||||||||||||| |||||    
T  43114994 gttcaagtcctggaaacagcctcttgtgtaaaaaa 43114960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 1121362 - 1121293
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| ||| |||||||||||||| | |||||||| | ||||| ||| || || |||||||||    
T  1121362 tgaaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaata 1121293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 21875042 - 21875103
Alignment:
Q  333 acgggttcaagtcctggaaacagcctcttgtgtcaaaaat-agggtaaggctacgtacaata 393  Q
    |||||||||| | ||||||||| |||||||||| |||||  ||||||||||| |||||||||    
T  21875042 acgggttcaaattctggaaacaacctcttgtgttaaaaaagagggtaaggctgcgtacaata 21875103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 55401208 - 55401265
Alignment:
Q  336 ggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||| |||||||||||||||| ||||| ||| |||| || |||| ||||    
T  55401208 ggttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataata 55401265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 31831241 - 31831286
Alignment:
Q  346 ctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||  |||||||||||||||| | |||||||    
T  31831241 ctggaaacagcctcttgtgt--aaaatagggtaaggctgcatacaata 31831286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 18724697 - 18724613
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  18724697 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaata 18724613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 27201653 - 27201737
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  27201653 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaata 27201737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 34725248 - 34725166
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  34725248 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 34725166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 2435939 - 2435855
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||    
T  2435939 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaata 2435855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 6925106 - 6925190
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||    
T  6925106 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaata 6925190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 18944649 - 18944733
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  18944649 ttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 18944733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 30395880 - 30395796
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  30395880 ttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 30395796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 32632708 - 32632625
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  32632708 ttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaata 32632625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 38478433 - 38478350
Alignment:
Q  308 cttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||| |||||||||    
T  38478433 cttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 38478350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 20004244 - 20004160
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||| |||||||||    
T  20004244 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaata 20004160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 23768472 - 23768388
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  23768472 ttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 23768388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 25468415 - 25468331
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||  ||||||||| | |||||||||    
T  25468415 ttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaata 25468331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 41319958 - 41319874
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  41319958 ttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaata 41319874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 46248105 - 46248021
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||| || |||||||||    
T  46248105 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 46248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 46991810 - 46991894
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||  ||||||||    
T  46991810 ttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaata 46991894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 22327105 - 22327179
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  22327105 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 8197049 - 8197130
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    |||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||| | ||||||||||||||||    
T  8197049 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgtaca 8197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 10668239 - 10668315
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| | |||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaata 10668315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 14617044 - 14617128
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || || | ||||||| | |||||||||    
T  14617044 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaata 14617128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 17470498 - 17470414
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||| ||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||    
T  17470498 ttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 17470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 35117920 - 35117836
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||  ||||||||    
T  35117920 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaata 35117836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 12126987 - 12126905
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||  |||| ||||||||||| |||||||||    
T  12126987 ttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtacaata 12126905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 47214517 - 47214599
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |  |||| ||||||||| | |||||||||    
T  47214517 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgttt--aaaacagggtaaggttgcgtacaata 47214599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 22930219 - 22930148
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaagg 381  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||    
T  22930219 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgt-aaaaacagggtaagg 22930148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 44485261 - 44485177
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| || ||||||| ||| | | ||||||||| |||||||||    
T  44485261 ttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtacaata 44485177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 35005139 - 35005213
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| |||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||| | |||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaata 35005213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 50760376 - 50760294
Alignment:
Q  311 gttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||  ||||  |||||||||| |||| ||||    
T  50760376 gttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataata 50760294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 35253329 - 35253255
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||||  |||| ||||||||||| |||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 35253255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 45812687 - 45812605
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||  |||| ||||||||||| | |||||||    
T  45812687 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgt--aaaagagggtaaggctgcatacaata 45812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 2436045 - 2435981
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaata 373  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  2436045 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 11596523 - 11596602
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||| ||||| ||||||||||| |||| ||||    
T  11596523 tgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggctgcgtataata 11596602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 20036226 - 20036282
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  20036226 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgt 20036282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 25290169 - 25290244
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaa--acagcctcttgtgtcaaaaatagggtaaggc 382  Q
    |||||||||||||| |||||||||||| ||||||||| |||||  |||||||||||||| ||||| ||||||||||    
T  25290169 ttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 27474287 - 27474370
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||| ||||| |||| || ||| |||||||||    
T  27474287 ttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgt-aaaaacagggcaaagctgcgtacaata 27474370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 33222990 - 33223073
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||| ||||| |||| |||| | |||||||||    
T  33222990 ttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgt-aaaaacagggaaaggttgcgtacaata 33223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 9939467 - 9939521
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  9939467 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgt 9939521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 34714629 - 34714675
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag 355  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  34714629 ttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacag 34714675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 19414445 - 19414527
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||| ||| |||||||||||||||||||||||| |||| |||||||| |||  |||| ||| ||||||| |||||||||    
T  19414445 ttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgt--aaaacaggttaaggctgcgtacaata 19414527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 31272522 - 31272446
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtaca 390  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| |||||||||| ||||| | ||||||||| ||||||    
T  31272522 tgtcacgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacatggtaaggctgcgtaca 31272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 45402101 - 45402161
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  45402101 ttgttgtcatgtgatggaa-ggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaa 45402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 4430178 - 4430094
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || ||||||||||||| ||||| || ||||||  |||||||| ||||| |||||||| || |||||||||    
T  4430178 ttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaata 4430094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 24564354 - 24564433
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    |||| ||||||||||||||| | | |||||||| |||||||| |||||||||| ||||| ||||||||| | ||||||||    
T  24564354 tgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaagggtgcgtacaat 24564433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 6983961 - 6983911
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctc 359  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  6983961 ttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc 6983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 19932904 - 19932823
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| ||||||||||  |||| ||| ||| |||||| ||||| ||||||||||| |||||||||    
T  19932904 ttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacct-ttgtgtaaaaaacagggtaaggctgcgtacaata 19932823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 50811945 - 50812030
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||| |||| |||||||||||||  ||| |||||||||||||| ||||||||  ||||| ||||||||| | |||||||||    
T  50811945 ttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaata 50812030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 45264542 - 45264478
Alignment:
Q  319 gtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||  ||||| || ||||||||    
T  45264542 gtgattgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggct 45264478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 52910223 - 52910275
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctctt 361  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||||||||||    
T  52910223 ttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 19974221 - 19974143
Alignment:
Q  314 gtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||| |||| |||||| ||||||||||||||| |||||||||||||  |||| |||||||||| |||| | |||||||||    
T  19974221 gtcacgtgactgaaagatcacgggttcaagtcttggaaacagcctcaagtgt-aaaaatagggcaaggttgcgtacaata 19974143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 15511303 - 15511229
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggct 383  Q
    ||||||| |||||  |||||||||||   || ||||||||||||| ||||||||||| ||||| |||||||||||    
T  15511303 ttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggct 15511229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 19701576 - 19701638
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||| ||||| ||||| |||||||||| ||||| || |||||||||||||||| |||||    
T  19701576 ttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaa 19701638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 22324925 - 22324982
Alignment:
Q  335 gggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||| | |||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgt-aaaaacagggtaaggctgcatacaata 22324982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 43768168 - 43768210
Alignment:
Q  313 tgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag 355  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  43768168 tgtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 43768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 18335437 - 18335356
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||  |||||||||||  ||| ||||||||||||||| ||||||| | |||| |||||||| | | |||||||||    
T  18335437 ttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaattagggtaaagttgcgtacaata 18335356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 16949449 - 16949393
Alignment:
Q  142 taatcttgttaatgatacatatgtagaggtatcaaaataacggtgtcaattaaacgg 198  Q
    ||||||||||||||||||| || |||||||| |||| | | ||||||||||||||||    
T  16949449 taatcttgttaatgatacacatatagaggtaccaaagtgatggtgtcaattaaacgg 16949393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 10378877 - 10378834
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaa 352  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||    
T  10378877 ttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 23371145 - 23371192
Alignment:
Q  324 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaa 371  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||    
T  23371145 tgaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaaa 23371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 18742113 - 18742027
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcct-ggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| |||||||| || | |||||||| || |||| |  ||||| ||||||||||| |||||||||    
T  18742113 ttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggctgcgtacaata 18742027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 34149076 - 34149030
Alignment:
Q  345 cctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    |||||||||||||||||||||  |||||||||||||| | |||||||    
T  34149076 cctggaaacagcctcttgtgtagaaaatagggtaaggttgcgtacaa 34149030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 40424748 - 40424786
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcct 347  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  40424748 ttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 49722724 - 49722670
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt 363  Q
    ||||||||| |||| |||||||||||||||| ||||| || ||||| ||||||||    
T  49722724 ttgttgtcacgtgaatgaaaggtcacgggtttaagtcatgtaaacaacctcttgt 49722670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 31382330 - 31382282
Alignment:
Q  344 tcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  31382330 tcctggaaacagcctcttgtgt-aaaaacaggataaggctgcgtacaata 31382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 19656258 - 19656174
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||  |||| | |||||||||  | ||||| | ||||||||||||||||||| ||||| | ||||| |||| ||||||||    
T  19656258 ttgttgtcgcgtgactcaaaggtcactagctcaaggcttggaaacagcctcttgtgtaaaaaacatggtaacgctatgtacaata 19656174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 22151510 - 22151562
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctctt 361  Q
    |||||||||| ||| || |||||||  ||||||||| ||||||||||||||||    
T  22151510 ttgttgtcatctgactgtaaggtcataggttcaagttctggaaacagcctctt 22151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 25554874 - 25554818
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    ||||||||| |||| | ||||| |||| ||| |||||||||||||| ||||||||||    
T  25554874 ttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgt 25554818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 58963 - 59044
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| || |||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaata 59044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 10200 - 10118
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||| || |||||||||    
T  10200 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagactgcgtacaata 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 20528 - 20446
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||| || |||||||||    
T  20528 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagactgcgtacaata 20446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 30562 - 30644
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||| |||||| |||| |||||||||    
T  30562 ttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgt--aaaacagggtagggctgcgtacaata 30644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 13175 - 13092
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||| | ||||||||| |||||||||    
T  13175 ttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgt-aaaaacaaggtaaggctgcgtacaata 13092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 46814 - 46898
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |  |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| | |||||||||    
T  46814 ttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaata 46898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Complemental strand, 24919 - 24842
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaa 391  Q
    |||||||||||||| |||||||||| |||||||||||     ||||||||||||||| ||||| ||||||||||| |||||||    
T  24919 ttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaa 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 47035 - 46995
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctgg 349  Q
    ||||||||| |||| |||||||||||| |||||||||||||    
T  47035 ttgttgtcaggtgactgaaaggtcacgagttcaagtcctgg 46995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 4140 - 4224
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||| | ||| ||||| | |||||||||    
T  4140 ttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaata 4224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 226558 - 226473
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |  ||||| ||||||||||| | |||||||    
T  226558 ttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaata 226473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 11122 - 11170
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 365  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 35167 - 35085
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-caaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||| || |||||||||||||||||||||| |||||| |||||||||   |||| ||||||||||| |||||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaata 35085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 43115 - 43173
Alignment:
Q  312 ttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  43115 ttgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 1737 - 1655
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||  |||| ||| ||||||| | |||||||    
T  1737 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgt--aaaacaggataaggctgcatacaata 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 10793 - 10877
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||| || |||||||||||||||||  ||| ||||| |||||||||| ||||| |||||| |||| ||| |||||    
T  10793 ttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaata 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 83858 - 83903
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaaca 354  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||    
T  83858 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 24647 - 24695
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcc 357  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||    
T  24647 ttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacagcc 24695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 23590 - 23665
Alignment:
Q  317 atgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaat 392  Q
    |||||| |||||||  ||||||||||||| || ||||| |||||||||| ||||| ||||| ||||| ||||||||    
T  23590 atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaat 23665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 8874 - 8935
Alignment:
Q  309 ttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtcaaaa 370  Q
    |||||||||||||| || |||||||| ||||||| ||||||||||| | |||||||| ||||    
T  8874 ttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 48758 - 48702
Alignment:
Q  335 gggttcaagtcctggaaacagcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    ||||||||||  |||||||||||||||||||  |||| ||||||||||| |||||||||    
T  48758 gggttcaagtggtggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaata 48702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 72999 - 72935
Alignment:
Q  330 gtcacgggttcaagtcctggaaac-agcctcttgtgtcaaaaatagggtaaggctacgtacaata 393  Q
    |||||||||||||||||| ||||| || ||||||||| ||||| | ||||||||| | |||||||    
T  72999 gtcacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcctacaata 72935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University