View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15278_low_14 (Length: 294)

Name: NF15278_low_14
Description: NF15278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15278_low_14
NF15278_low_14
[»] chr3 (37 HSPs)
chr3 (114-275)||(54635321-54635482)
chr3 (121-275)||(45283182-45283337)
chr3 (121-275)||(7779824-7779976)
chr3 (93-253)||(801303-801463)
chr3 (138-275)||(6716696-6716834)
chr3 (137-275)||(3617647-3617786)
chr3 (137-275)||(25637624-25637766)
chr3 (137-275)||(4600576-4600715)
chr3 (137-275)||(4598355-4598494)
chr3 (137-275)||(10211592-10211731)
chr3 (121-275)||(23199960-23200111)
chr3 (118-229)||(5257964-5258073)
chr3 (137-275)||(10209372-10209511)
chr3 (118-229)||(5260143-5260252)
chr3 (137-243)||(10056449-10056555)
chr3 (137-243)||(10058671-10058777)
chr3 (137-243)||(10060893-10060999)
chr3 (137-243)||(10063115-10063221)
chr3 (137-243)||(10065337-10065443)
chr3 (137-243)||(10067536-10067642)
chr3 (186-273)||(23197823-23197910)
chr3 (187-246)||(19683774-19683835)
chr3 (187-273)||(9636010-9636098)
chr3 (187-229)||(9634707-9634750)
chr3 (187-229)||(29811107-29811150)
chr3 (118-156)||(37406999-37407037)
chr3 (118-156)||(37408769-37408807)
chr3 (189-229)||(51399053-51399094)
chr3 (120-156)||(761154-761190)
chr3 (120-156)||(9635946-9635982)
chr3 (120-156)||(22834829-22834865)
chr3 (120-156)||(29196212-29196248)
chr3 (120-156)||(29682666-29682702)
chr3 (120-156)||(29811178-29811214)
chr3 (120-156)||(39153187-39153223)
chr3 (120-156)||(40734807-40734843)
chr3 (120-156)||(40735692-40735728)
[»] chr5 (27 HSPs)
chr5 (93-275)||(29720560-29720743)
chr5 (92-275)||(29722720-29722904)
chr5 (93-275)||(29750948-29751131)
chr5 (93-275)||(9789021-9789195)
chr5 (137-275)||(10593454-10593594)
chr5 (93-275)||(18441441-18441619)
chr5 (121-275)||(22536111-22536262)
chr5 (137-275)||(25078318-25078457)
chr5 (137-275)||(25136287-25136426)
chr5 (137-262)||(40380300-40380427)
chr5 (120-275)||(16409672-16409825)
chr5 (137-262)||(40382511-40382638)
chr5 (93-275)||(26178079-26178255)
chr5 (137-243)||(16544640-16544747)
chr5 (120-273)||(30182783-30182934)
chr5 (137-243)||(16546862-16546969)
chr5 (118-229)||(13343299-13343408)
chr5 (121-229)||(36073866-36073972)
chr5 (121-275)||(26170959-26171111)
chr5 (187-229)||(30682809-30682852)
chr5 (120-156)||(3075572-3075608)
chr5 (120-156)||(13488510-13488546)
chr5 (120-156)||(25413070-25413106)
chr5 (120-152)||(28278609-28278641)
chr5 (120-156)||(28750478-28750514)
chr5 (120-156)||(30682745-30682781)
chr5 (120-156)||(42428253-42428289)
[»] chr1 (18 HSPs)
chr1 (93-275)||(21054154-21054335)
chr1 (93-275)||(9987398-9987579)
chr1 (121-275)||(40282573-40282727)
chr1 (136-275)||(20622071-20622209)
chr1 (137-275)||(9036612-9036751)
chr1 (137-275)||(44203829-44203968)
chr1 (121-275)||(51765592-51765744)
chr1 (120-246)||(13316174-13316299)
chr1 (187-262)||(8550670-8550748)
chr1 (120-168)||(196732-196780)
chr1 (187-229)||(3157104-3157147)
chr1 (120-229)||(20762907-20763014)
chr1 (191-246)||(44455381-44455438)
chr1 (120-156)||(833992-834028)
chr1 (120-156)||(8550606-8550642)
chr1 (187-226)||(10925464-10925504)
chr1 (120-156)||(13137803-13137839)
chr1 (120-156)||(49918660-49918696)
[»] chr8 (22 HSPs)
chr8 (121-275)||(25690152-25690305)
chr8 (121-275)||(3439700-3439853)
chr8 (121-275)||(2627932-2628084)
chr8 (137-243)||(42575157-42575264)
chr8 (120-273)||(31218452-31218603)
chr8 (120-229)||(19945181-19945288)
chr8 (93-229)||(17982892-17983021)
chr8 (121-229)||(34254154-34254260)
chr8 (93-229)||(1746018-1746148)
chr8 (120-168)||(3303493-3303541)
chr8 (120-156)||(42498505-42498541)
chr8 (120-229)||(30143579-30143686)
chr8 (187-229)||(34256393-34256436)
chr8 (187-246)||(18105962-18106022)
chr8 (187-246)||(42498416-42498477)
chr8 (120-168)||(4743050-4743098)
chr8 (120-156)||(5689577-5689613)
chr8 (120-156)||(15213096-15213132)
chr8 (210-246)||(32902096-32902132)
chr8 (120-156)||(41366440-41366476)
chr8 (120-156)||(43036732-43036768)
chr8 (187-226)||(44304097-44304137)
[»] chr7 (25 HSPs)
chr7 (93-275)||(43503947-43504126)
chr7 (137-275)||(20344093-20344231)
chr7 (121-242)||(24790230-24790349)
chr7 (137-262)||(6594390-6594517)
chr7 (137-262)||(18388592-18388719)
chr7 (137-246)||(6592172-6592282)
chr7 (137-275)||(18392028-18392167)
chr7 (137-262)||(32060154-32060281)
chr7 (137-275)||(1560497-1560638)
chr7 (120-227)||(48409048-48409153)
chr7 (120-246)||(4178994-4179119)
chr7 (184-275)||(39731564-39731656)
chr7 (120-227)||(25766779-25766884)
chr7 (120-273)||(23555235-23555387)
chr7 (191-273)||(35854110-35854194)
chr7 (187-229)||(25616094-25616137)
chr7 (187-229)||(43864483-43864526)
chr7 (120-229)||(48489670-48489777)
chr7 (120-166)||(38671047-38671093)
chr7 (191-246)||(27348038-27348095)
chr7 (120-156)||(14069656-14069692)
chr7 (120-156)||(14379684-14379720)
chr7 (118-154)||(29991365-29991401)
chr7 (120-156)||(41648836-41648872)
chr7 (120-156)||(47675959-47675995)
[»] chr6 (23 HSPs)
chr6 (137-253)||(27648071-27648187)
chr6 (121-275)||(16555066-16555220)
chr6 (121-275)||(16578335-16578489)
chr6 (121-275)||(16616891-16617045)
chr6 (121-275)||(16631622-16631776)
chr6 (121-275)||(16653309-16653463)
chr6 (92-275)||(3072551-3072731)
chr6 (137-262)||(25421515-25421642)
chr6 (118-229)||(2171347-2171456)
chr6 (137-271)||(6027446-6027582)
chr6 (137-243)||(33341935-33342042)
chr6 (137-275)||(6097286-6097422)
chr6 (137-217)||(6136135-6136216)
chr6 (93-225)||(30834333-30834459)
chr6 (137-275)||(34167277-34167416)
chr6 (121-275)||(412299-412434)
chr6 (93-229)||(16452127-16452257)
chr6 (137-243)||(34165088-34165194)
chr6 (118-229)||(5408890-5408999)
chr6 (118-229)||(5413215-5413324)
chr6 (187-229)||(9182917-9182960)
chr6 (187-229)||(31404561-31404604)
chr6 (124-168)||(33160177-33160221)
[»] chr4 (15 HSPs)
chr4 (91-262)||(31495097-31495268)
chr4 (137-275)||(8395800-8395940)
chr4 (137-275)||(8393591-8393731)
chr4 (137-262)||(7122892-7123019)
chr4 (137-262)||(7125111-7125238)
chr4 (120-227)||(13992113-13992218)
chr4 (137-243)||(5136296-5136402)
chr4 (137-243)||(5138521-5138627)
chr4 (187-229)||(5369968-5370011)
chr4 (120-229)||(48143287-48143394)
chr4 (120-156)||(26175459-26175495)
chr4 (120-156)||(29999651-29999687)
chr4 (120-156)||(48893465-48893501)
chr4 (120-168)||(52467180-52467228)
chr4 (120-156)||(56178458-56178494)
[»] chr2 (20 HSPs)
chr2 (136-275)||(6266888-6267024)
chr2 (137-275)||(12647218-12647357)
chr2 (137-275)||(13655861-13656002)
chr2 (93-275)||(32289761-32289937)
chr2 (120-275)||(30833541-30833694)
chr2 (120-275)||(4484150-4484303)
chr2 (120-273)||(4502955-4503106)
chr2 (187-229)||(17057255-17057298)
chr2 (187-229)||(17085238-17085281)
chr2 (187-229)||(36205551-36205594)
chr2 (187-229)||(36987961-36988004)
chr2 (120-229)||(45099993-45100100)
chr2 (120-156)||(723569-723605)
chr2 (120-156)||(11690797-11690833)
chr2 (120-156)||(17057191-17057227)
chr2 (120-156)||(17085174-17085210)
chr2 (120-168)||(24885883-24885931)
chr2 (120-156)||(34139595-34139631)
chr2 (120-156)||(36987897-36987933)
chr2 (120-156)||(42362655-42362691)
[»] scaffold0565 (1 HSPs)
scaffold0565 (137-275)||(2436-2575)
[»] scaffold1808 (1 HSPs)
scaffold1808 (137-275)||(62-201)
[»] scaffold0674 (1 HSPs)
scaffold0674 (137-275)||(3558-3697)
[»] scaffold0137 (1 HSPs)
scaffold0137 (137-262)||(6484-6611)
[»] scaffold0491 (2 HSPs)
scaffold0491 (121-275)||(10982-11134)
scaffold0491 (184-275)||(8616-8708)
[»] scaffold0286 (1 HSPs)
scaffold0286 (118-229)||(11804-11914)
[»] scaffold0002 (1 HSPs)
scaffold0002 (118-273)||(434728-434882)
[»] scaffold1519 (1 HSPs)
scaffold1519 (118-227)||(1157-1264)
[»] scaffold0066 (1 HSPs)
scaffold0066 (187-246)||(20301-20362)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 54635482 - 54635321
Alignment:
Q  114 atcgagtcacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacc 212  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54635482 atcgagtcacaccaatactaaataatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacc 54635383  T
Q  213 tagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54635382 tagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagaggg 54635321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 45283337 - 45283182
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 220  Q
    ||||||||||| ||  |||||||||||||| | |||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  45283337 cacaccaatacaaagaatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtttgtgcaagcaataatcaacaaaacaccacctagatcta 45283238  T
Q  221 atctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  45283237 atctaggaaactagtgagaaacacaatacacaatcacaagataaacaaggagaggg 45283182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 7779824 - 7779976
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaac-aaaacatcacctagatct 219  Q
    ||||||||||| || || |||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||||||||    
T  7779824 cacaccaatacgaagtaagatgtgtggagcaaaggagagtggtaaccacc-aacaaa--gtgtgtgcaagcaataatcaacaaaaacagcacctagatct 7779920  T
Q  220 aatctaggaaacaagtg-agaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  7779921 aatctaggaaacaagtgaaaaaacacaatacacaagcacaaga-taaaaggagaggg 7779976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 253
Target Start/End: Complemental strand, 801463 - 801303
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||| | | |||||||| ||  ||   |||||||||||||    
T  801463 tgttgtgaattccgatctcaaaacgtgtcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaataaa---gtgtgtgcaagca 801367  T
Q  193 ataatcaac--aaaacatcacctagatctaatctaggaaacaagt-gagaaacacaatacacaa 253  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  801366 ataatcaacaaaaaacagcacctagatctaatctaggaaacaagtggaaaaacacaatacacaa 801303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 6716834 - 6716696
Alignment:
Q  138 tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaa-caaaacatcacctagatctaatctaggaaacaagtg 236  Q
    ||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  6716834 tgatgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaaccaaaacaccacctagatctaatctaggaaacaagtg 6716735  T
Q  237 agaaacac-aatacacaatcacaagattaaaaggagaggg 275  Q
     ||||| | || | |||||||||||| ||||||| |||||    
T  6716734 tgaaactcaaaaatacaatcacaaga-taaaaggggaggg 6716696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 3617786 - 3617647
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  3617786 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 3617687  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  3617686 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 3617647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 25637766 - 25637624
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||||| | |||||||||  || |||||||||| |||||||||||||||||||||||||||    
T  25637766 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagt 25637667  T
Q  236 gagaaacacaa--tacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||||||   | ||||||||||||| || ||||||||||    
T  25637666 gtgaaacacaaagcaaacaatcacaagataaacaaggagaggg 25637624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 4600576 - 4600715
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||| | || |||||||||| |||||||||| ||||||||||||||||    
T  4600576 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagt 4600675  T
Q  236 gagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||| |||  ||||||||||||| || ||||||||||    
T  4600676 gtgaaaca-aatcaacaatcacaagataaacaaggagaggg 4600715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 4598355 - 4598494
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || ||| |||||| |||||||||| ||||||||||||||||    
T  4598355 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagt 4598454  T
Q  236 gagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||| ||   ||||||||||||| || ||||||||||    
T  4598455 gtgaaaca-aagcaacaatcacaagataaacaaggagaggg 4598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 10211731 - 10211592
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||| |||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  10211731 atgatgtgtggagcgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 10211632  T
Q  236 gagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||| ||   ||||||||||||| || ||||||||||    
T  10211631 gtgaaaca-aagcaacaatcacaagataaacaaggagaggg 10211592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 23199960 - 23200111
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 220  Q
    ||||||||||| || |||||| |||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| | | ||||||||||||    
T  23199960 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataaaacacctagatcta 23200056  T
Q  221 atctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||| || ||| ||||||||  ||||| || |||| |||||||||||||    
T  23200057 atctaggaaacaaaatgaaaaacacaaaccacaagcataaga-taaaaggagaggg 23200111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 5257964 - 5258073
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||    
T  5257964 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctaga 5258060  T
Q  217 tctaatctaggaa 229  Q
    |||||||||||||    
T  5258061 tctaatctaggaa 5258073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 10209511 - 10209372
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||  | ||||| ||||||||||||| |||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  10209511 atgatgtgtggagtgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 10209412  T
Q  236 gagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||| ||   ||||||||||||| || ||||||||||    
T  10209411 gtgaaaca-aagcaacaatcacaagataaacaaggagaggg 10209372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 5260143 - 5260252
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    ||||| |||||||| || ||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||    
T  5260143 agtcaaaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacaacacctaga 5260239  T
Q  217 tctaatctaggaa 229  Q
    |||||| ||||||    
T  5260240 tctaatttaggaa 5260252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10056555 - 10056449
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10056555 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10056457  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10056456 gtgaaaca 10056449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10058777 - 10058671
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10058777 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10058679  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10058678 gtgaaaca 10058671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10060999 - 10060893
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10060999 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10060901  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10060900 gtgaaaca 10060893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10063221 - 10063115
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10063221 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10063123  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10063122 gtgaaaca 10063115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10065443 - 10065337
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10065443 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10065345  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10065344 gtgaaaca 10065337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10067642 - 10067536
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  10067642 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 10067544  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  10067543 gtgaaaca 10067536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 23197823 - 23197910
Alignment:
Q  186 gcaagcaataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    |||||||||||||||||| | | ||| ||||||||||||||||||| || ||| ||||||||  ||||| ||||||| |||||||||||    
T  23197823 gcaagcaataatcaacaataaaacacatagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcacaaga-taaaaggagag 23197910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 19683774 - 19683835
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa-acaagtgagaaacacaa 246  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  19683774 caagcaataatcaacaataacagcacctagatctaatctaggaataaaagtgaaaaacacaa 19683835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 9636010 - 9636098
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || || ||  ||||| |||||||| ||| ||||||    
T  9636010 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcataaatcacaagcacaagataaaagggagag 9636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 9634707 - 9634750
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  9634707 caagcaataatcaacaataacagcacctagatctaatctaggaa 9634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 29811150 - 29811107
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  29811150 caagcaataatcaacaataacagcacctagatctaatctaggaa 29811107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 37407037 - 37406999
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  37407037 agtcacaccactacaaaatatgatgtgtggagcaaagga 37406999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 37408807 - 37408769
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  37408807 agtcacatcaatacaaaatatgatgtgtggagcaaagga 37408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 51399094 - 51399053
Alignment:
Q  189 agcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  51399094 agcaataatcaacaataacagcacctagatctaatctaggaa 51399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 761190 - 761154
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  761190 tcacaccaatacaaactatgatgtgtggagcaaagga 761154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 9635946 - 9635982
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  9635946 tcacaccaatacaaactatgatgtgtggagcaaagga 9635982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 22834829 - 22834865
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  22834829 tcacaccaatacaaactatgatgtgtggagcaaagga 22834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 29196212 - 29196248
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  29196212 tcacaccaatacaaactatgatgtgtggagcaaagga 29196248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 29682702 - 29682666
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  29682702 tcacaccaatacaaactatgatgtgtggagcaaagga 29682666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 29811214 - 29811178
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  29811214 tcacaccaatacaaaatatgatttgtggagcaaagga 29811178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 39153187 - 39153223
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  39153187 tcacaccaatacaaactatgatgtgtggagcaaagga 39153223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 40734843 - 40734807
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  40734843 tcacaccaatacaaactatgatgtgtggagcaaagga 40734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 40735728 - 40735692
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  40735728 tcacaccaatacaaattatgatgtgtggagcaaagga 40735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 29720743 - 29720560
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 190  Q
    ||||||||||| ||||||||| ||||  ||||||||||| |  |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  29720743 tgttgtgaattccgatctcaagtcgaaccacaccaatacaagaaatatgttgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtacaag 29720644  T
Q  191 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29720643 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagaggg 29720560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 92 - 275
Target Start/End: Complemental strand, 29722904 - 29722720
Alignment:
Q  92 atgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaa 189  Q
    |||||||||||| ||||||||| ||||  ||||||||||| |  |||||| |||||||||||||| ||| |||||||||||||||||||||||||| |||    
T  29722904 atgttgtgaattccgatctcaagtcgaaccacaccaatacaagaaatatggtgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgtgtacaa 29722805  T
Q  190 gcaataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29722804 gcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagaggg 29722720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 29750948 - 29751131
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 190  Q
    ||||||||||| | |||| |||||||  ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29750948 tgttgtgaattccaatcttaaatcgaaccacaccaatacaagaaatatgatgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgtgtgcaag 29751047  T
Q  191 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  29751048 caataatcaacaaaacaccacctagatataatctagaaaacaagtgagaaacacagtacacaatcacaaga-taaaaggagaggg 29751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 9789021 - 9789195
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| |||||||||| |    ||||||||||| || ||||||||||||||||||||| | | ||||||||||| ||||||||  |||||||||    
T  9789021 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgt--gtgcaagca 9789113  T
Q  193 ataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    | ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||| |||| ||||||||    
T  9789114 aaaatcaacaaaacagcacctagatctaatctaggaaagaagtgaaaaacacaatacacaagcacaaga-taaacggagaggg 9789195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 10593594 - 10593454
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||||| | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  10593594 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagt 10593495  T
Q  236 gagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    | |||||||||  |||||||||||||| || ||||||||||    
T  10593494 gtgaaacacaaagcacaatcacaagataaacaaggagaggg 10593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 18441441 - 18441619
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | ||||||||||| ||||||||  |||||||||    
T  18441441 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgt--gtgcaagca 18441533  T
Q  193 ataatcaacaaaacatcacctagatctaatctaggaaacaagtg----agaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    | ||||||||||||||| ||||||| |||| ||||||||    
T  18441534 ataatcaacaaaacagcacctagatctaatctaggaaagaagtgaaaaaaaaacacaatacacaagcacaaga-taaacggagaggg 18441619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 22536111 - 22536262
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||| ||  |||||||||||||| | |||||  ||||||||||||| |||||||| ||  ||||||| ||||||||||| | |||||||||||    
T  22536111 cacaccaatacaaagaatgatgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtatg--caagcaacaatcaacaaaaaa-cacctagatct 22536207  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  22536208 aatctaggaaacaagtgagaaactcaaaacacaatcacaaga-taaaaggggaggg 22536262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 25078457 - 25078318
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  25078457 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 25078358  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  25078357 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 25078318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 25136426 - 25136287
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  25136426 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 25136327  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  25136326 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 25136287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 40380427 - 40380300
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  40380427 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 40380328  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  40380327 gtgaaacacaaagcaacaatcacaagat 40380300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 275
Target Start/End: Complemental strand, 16409825 - 16409672
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | ||||||| | ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  16409825 tcacaccaatacaaagtatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgggtgcaagcaataatcaacaataacaacacctagatc 16409729  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||| |||||| || || || |||||| ||||||| |||||||||||||    
T  16409728 taatctaggaaacaaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 16409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 40382638 - 40382511
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    ||||||||||||||   ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  40382638 atgatgtgtggagcggcggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 40382539  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  40382538 gtgaaacacaaagcaacaatcacaagat 40382511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 26178255 - 26178079
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | ||||||| | ||||||  |||||||||||||    
T  26178255 tgttgtgaattccgatctcaaaac----cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagca 26178163  T
Q  193 ataatcaa-caaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||  | |||| ||||||||||||||||||||| | |||||| || || || |||||| ||||||| |||||||||||||    
T  26178162 ataatcaatgataacaacacctagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 26178079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 16544747 - 16544640
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  16544747 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 16544648  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  16544647 gtgaaaca 16544640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 273
Target Start/End: Complemental strand, 30182934 - 30182783
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    ||||||||| || || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||| ||||||||||||| |||| ||||||||||    
T  30182934 tcacaccaaaacaaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caaacaataatcaacaataacaacacctagatc 30182838  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||| |||||||||||    
T  30182837 taatctaggaaacaaagtgaaaagcacaaaacacaagcacaaga-taaaaggagag 30182783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 16546969 - 16546862
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| || ||||||||||||||||  | | | |||||||| || |||||||||| |||||| ||| ||||||||||||||||    
T  16546969 atgatgtgtggagcgacggagagtgataaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagt 16546870  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  16546869 gtgaaaca 16546862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 13343408 - 13343299
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||| ||||| || ||||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||    
T  13343408 agtcacactaatacgaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacaacacctaga 13343312  T
Q  217 tctaatctaggaa 229  Q
    |||||||||||||    
T  13343311 tctaatctaggaa 13343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 36073866 - 36073972
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 219  Q
    ||||||||||| || ||||||||||||||||||||| | |  ||||||  || |||||||  ||  ||||||||||||||||| |||| |||||||||||    
T  36073866 cacaccaatacaaactatgatgtgtggagcaaaggaaagtaataaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatct 36073962  T
Q  220 aatctaggaa 229  Q
    ||||||||||    
T  36073963 aatctaggaa 36073972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 26171111 - 26170959
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatc-aacaaaacatcacctagatct 219  Q
    ||||||||||| || || |||||||||||||||||| | | |||| || | ||||||  ||||||||||||||||||| |  | |||| |||||||||||    
T  26171111 cacaccaatacgaagtaagatgtgtggagcaaaggaaagtagtaagca-ctaacaaa--gtgtgtgcaagcaataatcgatgataacaacacctagatct 26171015  T
Q  220 aatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||| | || ||| || || || |||||| ||||||| |||||||||||||    
T  26171014 aatctaggaatcaaaatgaaaagcataaaacacaagcacaaga-taaaaggagaggg 26170959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 30682809 - 30682852
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  30682809 caagcaataatcaacaataacaacacctagatctaatctaggaa 30682852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 3075572 - 3075608
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  3075572 tcacaccaatacaaactatgatgtgtggagcaaagga 3075608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 13488546 - 13488510
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  13488546 tcacaccaatacaaaatatgatgtgtggagtaaagga 13488510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 25413106 - 25413070
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  25413106 tcacaccaatacgaactatgatgtgtggagcaaagga 25413070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 28278641 - 28278609
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaa 152  Q
    |||||||||||| ||||||||||||||||||||    
T  28278641 tcacaccaatacaaaatatgatgtgtggagcaa 28278609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 28750478 - 28750514
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  28750478 tcacaccaatacaaattatgatgtgtggagcaaagga 28750514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 30682745 - 30682781
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  30682745 tcacaccaatacaaactatgatgtgtggagcaaagga 30682781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 42428253 - 42428289
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  42428253 tcacaccaatacaaactatgatgtgtggagcaaagga 42428289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 21054335 - 21054154
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatacta--aatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 190  Q
    ||||||||||| ||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||    
T  21054335 tgttgtgaattccgatctcaaatcgaaccacaccaatacaagaaatatgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgtg--caag 21054238  T
Q  191 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21054237 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagaggg 21054154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 9987579 - 9987398
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaa--tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 190  Q
    ||||||||||| ||||||||||||||  ||||||||||| |||  ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||    
T  9987579 tgttgtgaattccgatctcaaatcgaaccacaccaatacgaaaaatatgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgtg--caag 9987482  T
Q  191 caataatcaacaaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  9987481 caataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaacactatacacaatcacaaga-taaaaggagaggg 9987398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 40282727 - 40282573
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||| | || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  40282727 cacaccaatgcaaactatgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatct 40282628  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40282627 aatctaggaaacaagtgagaaacacaatacacaatcacaaga-taaaaggagaggg 40282573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 136 - 275
Target Start/End: Original strand, 20622071 - 20622209
Alignment:
Q  136 tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20622071 tatgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagt 20622170  T
Q  236 gagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20622171 gagaaacacaatacacaatcacaaga-taaaaggagaggg 20622209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 9036751 - 9036612
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagtg 236  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  9036751 atgatgtgtggagctaaggagagtggtaaccaccaaacaaagtgtttgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtg 9036652  T
Q  237 agaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
     |||||||||  |||||||||||||| || ||||||||||    
T  9036651 tgaaacacaaagcacaatcacaagataaacaaggagaggg 9036612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 44203968 - 44203829
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  44203968 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 44203869  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  44203868 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 44203829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 51765744 - 51765592
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 219  Q
    ||||||||||| |||||||||||||||||||||||| | | |||||||| ||  ||   ||| |||||||||||||||||||| |||| |||||||||||    
T  51765744 cacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccactaattaa---gtgagtgcaagcaataatcaacaataacaacacctagatct 51765648  T
Q  220 aatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||| |||||| || |||||  ||||| ||||||| |||||||||||||    
T  51765647 aatctaggaaacaaagtgaaaagcacaaaccacaagcacaaga-taaaaggagaggg 51765592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 13316174 - 13316299
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||| ||||||||||||||||| | | |||| ||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  13316174 tcacaccaatacgaaatataatgtgtggagcaaaggaaagtagtaatcaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 13316270  T
Q  219 taatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||| | |||||| ||||||||    
T  13316271 taatctaggaatcaaagtgaaaaacacaa 13316299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 8550670 - 8550748
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagat 262  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| ||||||||    
T  8550670 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagat 8550748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 196732 - 196780
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||||||| || ||||||||||||||||||||| ||| |||||||    
T  196732 tcacaccaatacaaattatgatgtgtggagcaaaggaaaatagtaacca 196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 3157147 - 3157104
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  3157147 caagcaataatcaacaataacagcacctagatctaatctaggaa 3157104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 20763014 - 20762907
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | |  ||||||   | ||||  |||  | ||||||||||||||||| |||| ||||||||||    
T  20763014 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtattaacca-atatcaaa--gtgaattcaagcaataatcaacaataacagcacctagatc 20762918  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  20762917 taatctaggaa 20762907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 44455438 - 44455381
Alignment:
Q  191 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  44455438 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 44455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 833992 - 834028
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  833992 tcacaccaatacaaactatgatgtgtggagcaaagga 834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 8550606 - 8550642
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  8550606 tcacaccaatacaaactatgatgtgtggagcaaagga 8550642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 10925504 - 10925464
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctag 226  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  10925504 caagcaataatcaacaataacaacacctagatctaatctag 10925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 13137803 - 13137839
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  13137803 tcacaccaatacaaattatgatgtgtggagcaaagga 13137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 49918696 - 49918660
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  49918696 tcacaccaatacaaactatgatgtgtggagcaaagga 49918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 25690305 - 25690152
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 220  Q
    ||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  25690305 cacaccaatacaaagaatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaagaatcaacaaaacaccacctagatcta 25690206  T
Q  221 atctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||| |||||    
T  25690205 atctaggaaacaagtgagaaacacaaaacacactcacaaga-taaaaggggaggg 25690152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 3439853 - 3439700
Alignment:
Q  121 cacaccaatactaaata--tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatc 218  Q
    ||||||||||||||| |  ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  3439853 cacaccaatactaaaaaaatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtgtg--caagcaacaatcaacaaaacaccacctagatc 3439756  T
Q  219 taatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  3439755 taatctaggaaacaagtgagaaactcaaaacacaatcacaaga-taaaaggagaggg 3439700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 2628084 - 2627932
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataa-tcaacaa-aacatcacctagatc 218  Q
    ||||||||||| || || |||||||||||||||||| | | |||||||| || ||||||| |||  ||||||| || ||||||| |||| ||||||||||    
T  2628084 cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaaaaaatcaacaataacaacacctagatc 2627988  T
Q  219 taatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||||||||| || || || |||||| ||||||| |||||||||||||    
T  2627987 taatctaggaaacaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 2627932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 42575157 - 42575264
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  42575157 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagt 42575256  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  42575257 gtgaaaca 42575264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 273
Target Start/End: Complemental strand, 31218603 - 31218452
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||  || ||||||||||||||||||||| | | | |||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  31218603 tcacaccaatataaactatgatgtgtggagcaaaggaaagtagcaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 31218507  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||| |||||| || ||||| ||| || ||||||| |||||||||||    
T  31218506 taatctaggaaacaaagtgaaaagcacaaaacataagcacaaga-taaaaggagag 31218452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 19945181 - 19945288
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || | ||||||||||||||||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  19945181 tcacaccaatacaaactttgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 19945277  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  19945278 taatctaggaa 19945288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 17983021 - 17982892
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| ||||||||||||     |||||||||| || |||||||||||||||||||||   | |||||||  || |||||||      ||||||    
T  17983021 tgttgtgaattccgatctcaaatc-----acaccaatacaaactatgatgtgtggagcaaaggaacgtagtaaccaataa-caaagtgaaca--caagca 17982930  T
Q  193 ataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  17982929 ataatcaacaataacagcacctagatctaatctaggaa 17982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 34254154 - 34254260
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 219  Q
    ||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| |||||||||||    
T  34254154 cacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacagcacctagatct 34254250  T
Q  220 aatctaggaa 229  Q
    ||||||||||    
T  34254251 aatctaggaa 34254260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 1746018 - 1746148
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    |||||||||||||| |||||||     |||||||||||| || |||||||||||||| |||||| | | |||||||  || |||||||      ||||||    
T  1746018 tgttgtgaatttcggtctcaaaa----tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaaca--caagca 1746110  T
Q  193 ataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  1746111 ataatcaacaataacagcacctagatctaatctaggaa 1746148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 3303493 - 3303541
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||||||| || ||||||||||||||||||||| | |||||||||    
T  3303493 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtggtaacca 3303541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 42498541 - 42498505
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42498541 tcacaccaatacaaaatatgatgtgtggagcaaagga 42498505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 30143686 - 30143579
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  30143686 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 30143590  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  30143589 taatctaggaa 30143579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 34256393 - 34256436
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  34256393 caagcaataatcaacaataacagcacctagatctaatctaggaa 34256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 18105962 - 18106022
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 246  Q
    |||||||||| |||||| |||||||||||||||||||||||||| | |||||| ||||||||    
T  18105962 caagcaataa-caacaataacatcacctagatctaatctaggaatcaaagtgaaaaacacaa 18106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 42498477 - 42498416
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  42498477 caagcaataattaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaa 42498416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 4743050 - 4743098
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||||||| || ||| ||||||||||||||||| | |||||||||    
T  4743050 tcacaccaatacaaactataatgtgtggagcaaaggaaagtggtaacca 4743098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 5689613 - 5689577
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  5689613 tcacaccaatacaaactatgatgtgtggagcaaagga 5689577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 15213132 - 15213096
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  15213132 tcacaccaatacaaactatgatgtgtggagcaaagga 15213096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 32902096 - 32902132
Alignment:
Q  210 acctagatctaatctaggaaacaagtgagaaacacaa 246  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  32902096 acctagatctaatctaggaaccaagtgaaaaacacaa 32902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 41366440 - 41366476
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  41366440 tcacaccaatacaaactatgatgtgtggagcaaagga 41366476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 43036768 - 43036732
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  43036768 tcacaccaatacaaaaaatgatgtgtggagcaaagga 43036732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 44304137 - 44304097
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctag 226  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  44304137 caagcaataatcaacaataacaacacctagatctaatctag 44304097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 43503947 - 43504126
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  43503947 tgttgtgaattccgatctcaaatcgtgtcacaccaatacgaaatatgatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgtgtgtgcaagca 43504045  T
Q  193 ataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||  | || |||||||||||||||||| | |||||| || || || |||||| ||||||| |||||||||||||    
T  43504046 ataatcaacaaa--aacagctagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 43504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 20344231 - 20344093
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa---catcacctagatctaatctaggaaacaa 233  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||| ||||||   || |||||||||||||||||||||||||    
T  20344231 atgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaatcgacaaaaaaccagcacctagatctaatctaggaaacaa 20344134  T
Q  234 gtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  20344133 gtgagaaacacaaaacacaatcacaaga-taaaaggagaggg 20344093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 24790349 - 24790230
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 220  Q
    ||||||||| | || ||||||||||||||||| ||| | ||||||||||||||||||||| |||  |||| |||||||||||||||| ||||||||||||    
T  24790349 cacaccaatgcaaagtatgatgtgtggagcaacggaaagtggtaaccaccaaacaaagtgcgtg--caagtaataatcaacaaaacaccacctagatcta 24790252  T
Q  221 atctaggaaacaagtgagaaac 242  Q
    |||||||||||| |||||||||    
T  24790251 atctaggaaacaggtgagaaac 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 6594390 - 6594517
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6594390 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6594489  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  6594490 gtgaaacacaaagcaacaatcacaagat 6594517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 18388592 - 18388719
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  18388592 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 18388691  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  18388692 gtgaaacacaaagcaacaatcacaagat 18388719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 6592172 - 6592282
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6592172 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6592271  T
Q  236 gagaaacacaa 246  Q
    | |||||||||    
T  6592272 gtgaaacacaa 6592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 18392028 - 18392167
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| |  |||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  18392028 atgatgtgtggagcgacagagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 18392127  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  18392128 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 18392167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 32060154 - 32060281
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  32060154 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 32060253  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  32060254 gtgaaacacaaagcaacaatcacaagat 32060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 1560497 - 1560638
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||| ||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  1560497 atgatgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 1560596  T
Q  236 gagaaacacaatac-acaatcacaagattaa-aaggagaggg 275  Q
    | |||||||||  | ||||||||||||| || ||||||||||    
T  1560597 gtgaaacacaaagcaacaatcacaagataaacaaggagaggg 1560638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 48409153 - 48409048
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  48409153 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacagcacctagatc 48409057  T
Q  219 taatctagg 227  Q
    |||||||||    
T  48409056 taatctagg 48409048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 4179119 - 4178994
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||  || |||||||  |||  |||||||||||||||| |||| ||||||||||    
T  4179119 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaataa-caaagtgaatgt--aagcaataatcaacaataacagcacctagatc 4179023  T
Q  219 taatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||| | |||||| ||||||||    
T  4179022 taatctaggaatcaaagtgaaaaacacaa 4178994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 39731656 - 39731564
Alignment:
Q  184 gtgcaagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| || |||||  ||||| ||||||| |||||||||||||    
T  39731656 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaaga-taaaaggagaggg 39731564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 25766779 - 25766884
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||||||||||||||||||| | | | |||||||   ||||||  ||| | |||||||||||||||||| |||| ||||||||||    
T  25766779 tcacaccaatacgaaatatgatgtgtggagcaaagaaaagtagtaacca-ataacaaa--gtgagcgcaagcaataatcaacaataacagcacctagatc 25766875  T
Q  219 taatctagg 227  Q
    |||||||||    
T  25766876 taatctagg 25766884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 273
Target Start/End: Complemental strand, 23555387 - 23555235
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  23555387 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 23555291  T
Q  219 taatctaggaaac-aagtgagaaacacaata-cacaatcacaagattaaaaggagag 273  Q
    ||||||||||| | |||| | |||||||||| ||||| || |||| |||||||||||    
T  23555290 taatctaggaatcaaagtaaaaaacacaataccacaagcaaaaga-taaaaggagag 23555235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 35854194 - 35854110
Alignment:
Q  191 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| || || || |||||| |||||||| ||| ||||||    
T  35854194 caataatcaacaataacagcacctagatctaatctaggaagcaaagtgaaaagcataaaacacaagcacaagataaaagggagag 35854110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 25616137 - 25616094
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  25616137 caagcaataatcaacaataacaacacctagatctaatctaggaa 25616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 43864526 - 43864483
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  43864526 caagcaataatcaacaataacagcacctagatctaatctaggaa 43864483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 48489777 - 48489670
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||  |  |||||||    ||  ||||||||||||||| |||| ||||||||||    
T  48489777 tcacaccaataccaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgaacatg--agcaataatcaacaataacaacacctagatc 48489681  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  48489680 taatctaggaa 48489670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 38671047 - 38671093
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaac 166  Q
    |||||||||||| || ||||||||||||||||||||| ||| |||||    
T  38671047 tcacaccaatacaaactatgatgtgtggagcaaaggaaaatagtaac 38671093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 27348095 - 27348038
Alignment:
Q  191 caataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  27348095 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 27348038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 14069656 - 14069692
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  14069656 tcacaccaatacaaactatgatgtgtggagcaaagga 14069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 14379684 - 14379720
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  14379684 tcacaccaatacaaactatgatgtgtggagcaaagga 14379720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 29991401 - 29991365
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaag 154  Q
    |||||||||||||| || |||||||||||||||||||    
T  29991401 agtcacaccaatacaaactatgatgtgtggagcaaag 29991365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 41648836 - 41648872
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  41648836 tcacaccaatacaaactatgatgtgtggagcaaagga 41648872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 47675959 - 47675995
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  47675959 tcacaccaatacaaactatgatgtgtggagcaaagga 47675995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 27648187 - 27648071
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagtg 236  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27648187 atgatgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtg 27648088  T
Q  237 agaaacacaatacacaa 253  Q
    |||||| ||||||||||    
T  27648087 agaaactcaatacacaa 27648071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 16555220 - 16555066
Alignment:
Q  121 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16555220 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16555123  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || ||||||||||    
T  16555122 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagaggg 16555066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 16578335 - 16578489
Alignment:
Q  121 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||| || |||||||||| |||||||||||    
T  16578335 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt--gtgcaagcaacaaacaacaaaacaccacctagatct 16578432  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || ||||||||||    
T  16578433 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagaggg 16578489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 16617045 - 16616891
Alignment:
Q  121 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16617045 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16616948  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || ||||||||||    
T  16616947 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagaggg 16616891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 16631776 - 16631622
Alignment:
Q  121 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16631776 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16631679  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || ||||||||||    
T  16631678 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagaggg 16631622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 16653463 - 16653309
Alignment:
Q  121 cacaccaatactaaata-tgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatct 219  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| || |||||||||| |||||||||||    
T  16653463 cacaccaatactaaataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatct 16653366  T
Q  220 aatctaggaaacaagtgagaaacacaatacacaatcacaagattaa-aaggagaggg 275  Q
    ||||||||||||||||| |||||||||  |||||||||||||| || ||||||||||    
T  16653365 aatctaggaaacaagtgtgaaacacaaagcacaatcacaagataaacaaggagaggg 16653309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 3072551 - 3072731
Alignment:
Q  92 atgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagc 191  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||| | ||||||  ||||||||||||    
T  3072551 atgttgtgaattccgatctcaaatcgtgtcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagc 3072647  T
Q  192 aataatcaac-aaaacatcacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||||| || || || |||||| ||||||| |||||||||||||    
T  3072648 aataatcaacaaaaatagcacatagatctaatctaggaaacaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 3072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 25421642 - 25421515
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  25421642 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 25421543  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  25421542 gtgaaacacaaagcaacaatcacaagat 25421515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 2171347 - 2171456
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||||||    
T  2171347 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagcaataatcaacaataacagcacctaga 2171443  T
Q  217 tctaatctaggaa 229  Q
    |||||||||||||    
T  2171444 tctaatctaggaa 2171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 6027582 - 6027446
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | |||||  |||||||||| ||||| |||| | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  6027582 atgatgtgtggagcgacggagaggggtaaccacctaacaaggtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 6027483  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggag 271  Q
    | |||||||||  | ||||||||||||| ||| ||||    
T  6027482 gtgaaacacaaagcaacaatcacaagataaaatggag 6027446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 33341935 - 33342042
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  33341935 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 33342034  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  33342035 gtgaaaca 33342042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 6097286 - 6097422
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa-catcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||||| ||| | | |||||||| || |||||||||||  ||||| ||||||||||||| || ||||| ||||||||||||| |||||||    
T  6097286 atgatgtgtggagcaacggaaagtagtaaccactaa-caaagtgtgtg--caagctataatcaacaaaaacagcaccttgatctaatctaggtaacaagt 6097382  T
Q  236 g-agaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    | | ||||||||||||||||||||||| || ||||||||||    
T  6097383 ggaaaaacacaatacacaatcacaaga-tacaaggagaggg 6097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 6136135 - 6136216
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgt-gtgtgcaagcaataatcaacaaaacatcacctagat 217  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || |||||||||| |||||||||    
T  6136135 atgatgtgtggagcaacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 30834333 - 30834459
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    |||||||||||||| |||||||     |||||||||||| |||||||||||||||||||||||| ||| |||||||   ||||||  |||  ||||||||    
T  30834333 tgttgtgaatttcggtctcaaaa----tcacaccaatacgaaatatgatgtgtggagcaaaggaaaatagtaacca-ataacaaa--gtgaatgcaagca 30834425  T
Q  193 ataatcaacaa-aacatcacctagatctaatcta 225  Q
    ||||||||||| |||| |||||||||||||||||    
T  30834426 ataatcaacaataacagcacctagatctaatcta 30834459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 34167416 - 34167277
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgt-gtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||||||   |  || |||||||| || |||||||||| |||||||||| |||||||||| |||||    
T  34167416 atgatgtgtggagcgacggagagtggtaaccaccaaacaaaaaatattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagt 34167317  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  34167316 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 34167277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 412434 - 412299
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatcta 220  Q
    ||||||||||| || ||||||||||||||||||||| | | |||||||||||||||||||||||                   |||| ||||||||||||    
T  412434 cacaccaataccaagtatgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtg------------------caacagcacctagatcta 412353  T
Q  221 atctaggaaacaagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  412352 atctaggtaacaagtgaaaaacacaatacacaagcacaaga-taaaaggagaggg 412299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 16452127 - 16452257
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| ||||||||||     |||||||||||| || |||||||||||||| |||||| | | |||||||  || |||||||  |   ||||||    
T  16452127 tgttgtgaattccgatctcaaaa----tcacaccaatacgaactatgatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaata--caagca 16452219  T
Q  193 ataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  16452220 ataatcaacaataacatcacctagatctaatctaggaa 16452257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 34165194 - 34165088
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||  | | | |||||||| || ||||||| || |||||||||| ||||||||||||||||    
T  34165194 atgatgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagt 34165096  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  34165095 gtgaaaca 34165088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 5408890 - 5408999
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| ||||||||    
T  5408890 agtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacaacacctaga 5408986  T
Q  217 tctaatctaggaa 229  Q
    |||||||||||||    
T  5408987 tctaatctaggaa 5408999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 5413215 - 5413324
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |  ||||||| |    ||||||||||||||||| |||| ||||||||    
T  5413215 agtcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaaccaatat-caaagtgagca--caagcaataatcaacaataacaacacctaga 5413311  T
Q  217 tctaatctaggaa 229  Q
    |||||||||||||    
T  5413312 tctaatctaggaa 5413324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 9182917 - 9182960
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  9182917 caagcaataatcaacaataacaacacctagatctaatctaggaa 9182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 31404561 - 31404604
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  31404561 caagcaataatcaacaataacagcacctagatctaatctaggaa 31404604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 33160177 - 33160221
Alignment:
Q  124 accaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||| || ||||||||||||||||||||| ||| |||||||    
T  33160177 accaatacaaactatgatgtgtggagcaaaggaaaatagtaacca 33160221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 31495097 - 31495268
Alignment:
Q  91 catgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaag 190  Q
    ||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||| | | ||||||| ||| |||||||||||||||||    
T  31495097 catgttgtgaattccgatctcaaatcgtgtcataccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccatcaa-caaagtgtgtgtgcaag 31495195  T
Q  191 caataatcaacaaaacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagat 262  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| || || || |||||| ||||||||    
T  31495196 caataatcaacaaaacagcacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagat 31495268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 8395940 - 8395800
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  8395940 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagt 8395841  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||||  || ||||||||    
T  8395840 gtgaaacacaaagcaacaatcacaagatacaatggagaggg 8395800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 8393731 - 8393591
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||||||| |||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  8393731 atgatgtgtggagcgacggagagtggtaaccaccaaacgaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 8393632  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||||  || ||||||||    
T  8393631 gtgaaacacaaagcaacaatcacaagatacaatggagaggg 8393591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 7123019 - 7122892
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  7123019 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 7122920  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  7122919 gtgaaacacaaagcaacaatcacaagat 7122892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 7125238 - 7125111
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  7125238 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 7125139  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  7125138 gtgaaacacaaagcaacaatcacaagat 7125111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 13992113 - 13992218
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  13992113 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacagcacctagatc 13992209  T
Q  219 taatctagg 227  Q
    |||||||||    
T  13992210 taatctagg 13992218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 5136402 - 5136296
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| |  |||||||||||||| ||||||||||||||||| |||||    
T  5136402 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagt 5136304  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  5136303 gtgaaaca 5136296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 5138627 - 5138521
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||  | | | |||||||| |  |||||||||||||| ||||||||||||||||| |||||    
T  5138627 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagt 5138529  T
Q  236 gagaaaca 243  Q
    | ||||||    
T  5138528 gtgaaaca 5138521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 5369968 - 5370011
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  5369968 caagcaataatcaacaataacagcacctagatctaatctaggaa 5370011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 48143394 - 48143287
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  48143394 tcacaccaatacaaactatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacaacacctagatc 48143298  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  48143297 taatctaggaa 48143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 26175459 - 26175495
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  26175459 tcacaccaatacaaactatgatgtgtggagcaaagga 26175495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 29999651 - 29999687
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  29999651 tcacaccaatacaaactatgatgtgtggagcaaagga 29999687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 48893465 - 48893501
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  48893465 tcacaccaatacaaactatgatgtgtggagcaaagga 48893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 52467180 - 52467228
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||||||| || ||||||||||| ||||||||| | |||||||||    
T  52467180 tcacaccaatacaaactatgatgtgtgaagcaaaggaaagtggtaacca 52467228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 56178458 - 56178494
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  56178458 tcacaccaatacaaactatgatgtgtggagcaaagga 56178494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 136 - 275
Target Start/End: Complemental strand, 6267024 - 6266888
Alignment:
Q  136 tatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  6267024 tatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgt--aagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagt 6266927  T
Q  236 gagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    || ||||||||||||||| ||||||| |||| ||||||||    
T  6266926 gaaaaacacaatacacaagcacaaga-taaacggagaggg 6266888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 12647218 - 12647357
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  12647218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 12647317  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  12647318 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 12647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 13655861 - 13656002
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||| ||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  13655861 atgatgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 13655960  T
Q  236 gagaaacacaatac-acaatcacaagattaa-aaggagaggg 275  Q
    | |||||||||  | ||||||||||||| || ||||||||||    
T  13655961 gtgaaacacaaagcaacaatcacaagataaacaaggagaggg 13656002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 32289937 - 32289761
Alignment:
Q  93 tgttgtgaatttcgatctcaaatcgagtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagca 192  Q
    ||||||||||| |||||||||| |    ||||||||||| || || |||||||||||||||||| | | |||||||| || ||||||| |||  ||||||    
T  32289937 tgttgtgaattccgatctcaaaac----cacaccaatacaaagtaagatgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagca 32289845  T
Q  193 ataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||| || || || |||||| ||||||| |||||||||||||    
T  32289844 ataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaaga-taaaaggagaggg 32289761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 275
Target Start/End: Complemental strand, 30833694 - 30833541
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||  ||  |   |||| |||||||||||||||||||| |||| ||||||||||    
T  30833694 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaaccattaatta---tgtgagtgcaagcaataatcaacaataacaacacctagatc 30833598  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||| |||||| || |||||  ||||| ||||||| |||||||||||||    
T  30833597 taatctaggaaacaaagtgaaaagcacaaaccacaagcacaaga-taaaaggagaggg 30833541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 4484150 - 4484303
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| |||||||||||||||||||||||| | | |||||||   ||||||  ||| |||||||||||||||||||| |||| ||||||||||    
T  4484150 tcacaccaatacgaaatatgatgtgtggagcaaaggaaagtagtaacca-ataacaaa--gtgagtgcaagcaataatcaacaataacaacacctagatc 4484246  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    ||||||||||||| |||||| || || ||  ||||| ||||||| |||||||||||||    
T  4484247 taatctaggaaacaaagtgaaaagcaaaaaccacaagcacaaga-taaaaggagaggg 4484303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 273
Target Start/End: Original strand, 4502955 - 4503106
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||| |||||||||| |||||| | | |||||||  || |||||||  ||  ||||||||||||||||| |||| ||||||||||    
T  4502955 tcacaccaatacaaactataatgtgtggagtaaaggaaagtagtaaccaataa-caaagtgaatg--caagcaataatcaacaataacagcacctagatc 4503051  T
Q  219 taatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||| |||||||||||    
T  4503052 taatctaggaaacaaagtgaaaagcacaaaacacaagcacaaga-taaaaggagag 4503106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 17057255 - 17057298
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  17057255 caagcaataatcaacaataacagcacctagatctaatctaggaa 17057298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 17085238 - 17085281
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  17085238 caagcaataatcaacaataacagcacctagatctaatctaggaa 17085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 36205551 - 36205594
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  36205551 caagcaataatcaacaataacagcacctagatctaatctaggaa 36205594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 36987961 - 36988004
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaa 229  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  36987961 caagcaataatcaacaataacaacacctagatctaatctaggaa 36988004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 45100100 - 45099993
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatc 218  Q
    |||||||||||| || ||||||||||||||||||||| | | |||||||   | ||||  |||    ||||||||||||||||| |||| ||||||||||    
T  45100100 tcacaccaatacgaattatgatgtgtggagcaaaggaaagtagtaacca-atatcaaa--gtgaacacaagcaataatcaacaataacagcacctagatc 45100004  T
Q  219 taatctaggaa 229  Q
    |||||||||||    
T  45100003 taatctaggaa 45099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 723569 - 723605
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  723569 tcacaccaatacaaactatgatgtgtggagcaaagga 723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 11690833 - 11690797
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  11690833 tcacaccaatacaaactatgatgtgtggagcaaagga 11690797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 17057191 - 17057227
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  17057191 tcacaccaatacaaaatatgatgtgtagagcaaagga 17057227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 17085174 - 17085210
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  17085174 tcacaccaatacaaaatatgatgtgtagagcaaagga 17085210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 24885931 - 24885883
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaacca 168  Q
    |||||||||||| || ||||||||||| ||||||||| ||| |||||||    
T  24885931 tcacaccaatacaaactatgatgtgtgtagcaaaggaaaatagtaacca 24885883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 34139595 - 34139631
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  34139595 tcacaccaatacaaactatgatgtgtggagcaaagga 34139631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 36987897 - 36987933
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  36987897 tcacaccaatacaaactatgatgtgtggagcaaagga 36987933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 42362691 - 42362655
Alignment:
Q  120 tcacaccaatactaaatatgatgtgtggagcaaagga 156  Q
    |||||||||||| || |||||||||||||||||||||    
T  42362691 tcacaccaatacaaactatgatgtgtggagcaaagga 42362655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 2436 - 2575
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  2436 atgatgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 2535  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  2536 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 2575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 201 - 62
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  201 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 102  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  101 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 62  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 275
Target Start/End: Original strand, 3558 - 3697
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    |||||||||||||| | ||||| ||||||||||| |||||||| | | |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  3558 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagt 3657  T
Q  236 gagaaacacaatac-acaatcacaagattaaaaggagaggg 275  Q
    | |||||||||  | |||||||||||| || ||||||||||    
T  3658 gtgaaacacaaagcaacaatcacaaga-tacaaggagaggg 3697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 6611 - 6484
Alignment:
Q  137 atgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacatcacctagatctaatctaggaaacaagt 235  Q
    ||||| |||||||| | ||||| |||||||||||||||||||| | | |||||||||| || |||||| ||| |||||||||| ||||||||||||||||    
T  6611 atgatatgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagt 6512  T
Q  236 gagaaacacaatac-acaatcacaagat 262  Q
    | |||||||||  | |||||||||||||    
T  6511 gtgaaacacaaagcaacaatcacaagat 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 275
Target Start/End: Original strand, 10982 - 11134
Alignment:
Q  121 cacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctagatct 219  Q
    ||||||||||| || |||||| |||||||||||||| | | |||||||   |  ||   ||| |||||||||||||||||||| |||| |||||||||||    
T  10982 cacaccaatacaaagtatgatatgtggagcaaaggaaagtagtaaccaatgactaa---gtgggtgcaagcaataatcaacaataacaacacctagatct 11078  T
Q  220 aatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||| |||||| ||||||||  ||||| ||||||| |||||||||||||    
T  11079 aatctaggaaacaaagtgaaaaacacaaaccacaagcacaaga-taaaaggagaggg 11134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 8616 - 8708
Alignment:
Q  184 gtgcaagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagaggg 275  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| || |||||  ||||| ||||||| |||||| ||||||    
T  8616 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaaga-taaaagaagaggg 8708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 11914 - 11804
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||||||    
T  11914 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaacca-ctaacaaa--gtgtgtgcaagcaataatcaacaataacagcacctaga 11818  T
Q  217 t-ctaatctaggaa 229  Q
    | ||||||||||||    
T  11817 tactaatctaggaa 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 273
Target Start/End: Complemental strand, 434882 - 434728
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||||||||||| | | |||||||  |   ||   |||| | ||| ||||||||||||| |||| ||||||||    
T  434882 agtcacaccaatacgaactatgatgtgtggagcaaaggaaagtagtaaccattattaaa---gtgttttcaatcaataatcaacaataacagcacctaga 434786  T
Q  217 tctaatctaggaaac-aagtgagaaacacaatacacaatcacaagattaaaaggagag 273  Q
    ||||||||||||| | |||||| || ||||| |||||| |||||||| ||| ||||||    
T  434785 tctaatctaggaatcaaagtgaaaagcacaaaacacaagcacaagataaaagggagag 434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 1264 - 1157
Alignment:
Q  118 agtcacaccaatactaaatatgatgtgtggagcaaaggagaatggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacatcacctaga 216  Q
    |||||||||||||| || ||||||||||||| ||||||| | | |||||||   |  | | ||||  ||||||||||||||||||| |||| ||||||||    
T  1264 agtcacaccaatacgaactatgatgtgtggaacaaaggatagtagtaacca---atgacaatgtgaatgcaagcaataatcaacaataacaccacctaga 1168  T
Q  217 tctaatctagg 227  Q
    |||||||||||    
T  1167 tctaatctagg 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 20301 - 20362
Alignment:
Q  187 caagcaataatcaacaa-aacatcacctagatctaatctaggaaac-aagtgagaaacacaa 246  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  20301 caagcaataattaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 20362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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