View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15279_high_28 (Length: 232)
Name: NF15279_high_28
Description: NF15279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15279_high_28 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 15154761 - 15154958
Alignment:
| Q |
16 |
aatattgtattaaacttcattttttaaccattaaaaaggtaaattatatttacacttcaccaaataacatctaaattaaatcatacttaccgtaaaattt |
115 |
Q |
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| T |
15154761 |
aatattgtattaaacttcattttttaaccattaaaaaggtaaattatatttacacttcaccaaataacatctaaattaaatcatacttaccgtaaaattt |
15154860 |
T |
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| Q |
116 |
ctaactaatcgaaataacataatacttttaagtttttatataatatactatgacatcatgcataatgttaaaatattctttatggtatatatcattag |
213 |
Q |
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| T |
15154861 |
ctaactaatcgaaataacataatacttttaagtttttatataatatactatgacatcatgcataatgttaaaatattatttatggtatatatcattag |
15154958 |
T |
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