View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15281_high_7 (Length: 290)
Name: NF15281_high_7
Description: NF15281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15281_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 268
Target Start/End: Complemental strand, 50767470 - 50767212
Alignment:
| Q |
10 |
tgttactttgattaactggatcagtggcattaaaatcaaggtgattaattctagatgatatctacaggttaaattctagtatatgcagattgaaccacac |
109 |
Q |
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| T |
50767470 |
tgttactttgattaactggatcagtggcattaaaatcaaggtgattaattctagatgatatctacaggttaaattctagtatatgcagattgaaccacac |
50767371 |
T |
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| Q |
110 |
atttattgaaccaagatgttgcatgaatgaatccgaatggaaatcaaatgattcaagtggcgtggctttgaagaagttcaagaaagacagcgtttacatt |
209 |
Q |
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| T |
50767370 |
atttattgaaccaagatgttgcatgaatgaatccgaatggaaatcaaatgattcaagtggcgtggctttgaagaagttcaagaaagacagcgtttacatt |
50767271 |
T |
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| Q |
210 |
gataaaactggcaacttaaggaacttcaatcacaaaaaactttccaggaaaaaatgtaa |
268 |
Q |
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| T |
50767270 |
gataaaactggcaacttaaggaacttcaatcacaaaaaactttccaggaaaaaatgtaa |
50767212 |
T |
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