View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15284_low_14 (Length: 342)
Name: NF15284_low_14
Description: NF15284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15284_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 53 - 327
Target Start/End: Complemental strand, 36560441 - 36560167
Alignment:
| Q |
53 |
aaaaaattagaatttttgagaatatttaatctagtttttaatttaaatgtatttccaaagcttctatgatatctcataaaaaataaaacttctataatat |
152 |
Q |
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| T |
36560441 |
aaaaaaatagaatttttgagaatatttaatctagtttttaatttaaatgtattttcaaagcttctatgatatctcataaaaaataaaacttctataatat |
36560342 |
T |
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| Q |
153 |
cttacctaacattttttattttacccatgaagagatataggaaaagccataaacaaacggcagtaatattcctattagctttgtgtaagaaattaactta |
252 |
Q |
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| T |
36560341 |
cttacctaacattttttattttacccatgaagagatataggaaaagccataaacaaacggcagtaatattcctattagctttgtgtaagaaattaactta |
36560242 |
T |
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| Q |
253 |
atattaaagaaaatatatgagatttaaaaaatataagatagattacacggagtgtaaaagatataaattgaatgt |
327 |
Q |
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| T |
36560241 |
atattaaagaaaatatatgagatttaaaaaatataagatagattacacggagtgtaaaagatataaattgaatgt |
36560167 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 36560485 - 36560453
Alignment:
| Q |
27 |
tagagagattgtattttcaaaaacataaaaaat |
59 |
Q |
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| T |
36560485 |
tagagagattgtattttcataaacataaaaaat |
36560453 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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