View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15285_high_4 (Length: 252)
Name: NF15285_high_4
Description: NF15285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15285_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 40753536 - 40753302
Alignment:
| Q |
8 |
cccgatccattgagaaaataagacttaatctaatccgaaacaaagataaaaggtagacccttactacttttgataagaaactataagttttaataataaa |
107 |
Q |
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| T |
40753536 |
cccgatccatcgagaaaataagacttaacgtagtctgaaacaaagataaaaggtagacccttactacttttgataagaaactataatttttaataataaa |
40753437 |
T |
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| Q |
108 |
aagggaaatagatttaatatttttcaaaatacactggagaaaagtaaaagtccatcttctttcaaaataaagtaaaagtccatctttaaacccttgttgg |
207 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40753436 |
aagggaaatagatttaatatttttcaaaatacaccagagaaaagtaaaagtccatctcctttcaaaataaagtaaaagtccatctttaaacccttgttgg |
40753337 |
T |
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| Q |
208 |
gatgtctatattagacaaaccctcgtttttctgtg |
242 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
40753336 |
gatgtctatattagacaaaccctcgtttttctgtg |
40753302 |
T |
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