View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15285_high_5 (Length: 240)
Name: NF15285_high_5
Description: NF15285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15285_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 5257024 - 5257236
Alignment:
| Q |
10 |
agcaaaggtagaattcacatttctctctaacatttcagcatactaatagggtttcaaataaaggtctgcgatcgcaacgtgagctgcaacacaacactat |
109 |
Q |
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| T |
5257024 |
agcaaaggtagaattcacatttctctctaacatttcagcatacaaatagggtttcaaataaaggtctgcgatcgcaacgtgagctgcaacacaacacttt |
5257123 |
T |
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| Q |
110 |
tttatgttgtcaaacccgcaatgcgactgcaattgaggccccattggccgtattttattgtgattctccgtaatatcaagaatcacaacatagctgcaac |
209 |
Q |
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| T |
5257124 |
tttatgttgtcaaacccgcaatgcgactgcaattgaggccccattggccgtattttattgtgattctccgtaatatcaagaatcgcaacatagctgcaac |
5257223 |
T |
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| Q |
210 |
tgctaccgcgact |
222 |
Q |
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| T |
5257224 |
tgctaccacgact |
5257236 |
T |
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