View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15287_low_6 (Length: 286)
Name: NF15287_low_6
Description: NF15287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15287_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 9 - 269
Target Start/End: Original strand, 8918376 - 8918636
Alignment:
| Q |
9 |
gataatactaaatttaatgtaaaatattgaataaaaaagagtgtagactctttatttaatcaacttaatttcaacacttgataaaactttggaagatacc |
108 |
Q |
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| T |
8918376 |
gataatactaaatttaatgtaaaatattgaataaaaaagagtgtagactctttatttaatcaacttaatttcaacacttgataagactttggaagatacc |
8918475 |
T |
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| Q |
109 |
cacatagtgaaagaaaaattcttacacatatgtcagatcgaccatgaatatttgttggtggataatgatatgcctggttgtcatcgttgttcatgataac |
208 |
Q |
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| T |
8918476 |
cacattgtgaaagaaaaattcttacacatatgtcagatcgaccatgaatatttgttggtggataatgatatgcctggttgtcatcgttgttcatgataac |
8918575 |
T |
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| Q |
209 |
ggcactataaattaattgatcattggaggatcaagtattcatagaattctgaataagaaac |
269 |
Q |
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| T |
8918576 |
ggcactataaattaattgatcattggaggatcaagtattcatagaattctgaataagaaac |
8918636 |
T |
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