View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15289_high_7 (Length: 426)
Name: NF15289_high_7
Description: NF15289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15289_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 21 - 417
Target Start/End: Complemental strand, 31047375 - 31046979
Alignment:
| Q |
21 |
acatcatcatcaacacaaccaacagcaataaaccaagagacatggaaccaactcttaggcaacaacaactgggaaaccttattaaacccactagacctca |
120 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047375 |
acatcatcatcaacacaaccaacaacaataaaccaagagacatggaaccaactcttaggcaacaacaactgggaaaccttattaaacccactagacctca |
31047276 |
T |
|
| Q |
121 |
atctccgcaacctcatcctccgttgtggtgacttcatacaaacaacctacgactctttcaacaacgaccaaaactctatctactgcggttcaagccgttt |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047275 |
atctccgcaacctcatcctccgttgtggtgacttcatacaaacaacctacgactctttcaacaacgaccaaaactctatctactgcggttcaagccgtta |
31047176 |
T |
|
| Q |
221 |
tggcaaaacctcattctttaacaaagtcatgcttgaaaaccctacacactacactgttgtttctttcctttacgctacagcacgtgtttctgttcctgaa |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
31047175 |
tggcaaaacctcattctttaacaaagtcatgcttgaaaaccctacacactacactgttgtttctttcctttatgctacagcacgtgtttctgttcctgaa |
31047076 |
T |
|
| Q |
321 |
gcttttattcttcactcactttcacgtgagagttgggaccgtgagtctaactggattggttacatcgctgttagttccgatgaacggagtagagagt |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047075 |
gcttttattcttcactcactttcacgtgagagttgggaccgtgagtctaactggattggttacatcgctgttagttccgatgaacggagtagagagt |
31046979 |
T |
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