View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1528_low_14 (Length: 317)
Name: NF1528_low_14
Description: NF1528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1528_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 96 - 254
Target Start/End: Complemental strand, 30354699 - 30354541
Alignment:
| Q |
96 |
tttttaccctgtaattttcttcttcttcccacgttccatcaaaaccttatatttacctttctcttcttcatgtttctcttctttttattgggttttgaat |
195 |
Q |
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| T |
30354699 |
tttttaccctgtaattttcttcttcttcccacgttccatcaaaaccttatatttacctttctcttcttcatgtttctcttctttttattggattttgaat |
30354600 |
T |
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| Q |
196 |
tgagttaagagttttttcctccaaaattgtgtttgtttgttctaaaaagtataatggcg |
254 |
Q |
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| T |
30354599 |
tgagttaagagtttttttctccaaaattgtgtttgtttgttctaaaaagtataatggcg |
30354541 |
T |
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