View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1528_low_16 (Length: 309)
Name: NF1528_low_16
Description: NF1528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1528_low_16 |
 | |
|
| [»] scaffold0140 (1 HSPs) |
| | |
|
| [»] scaffold1899 (1 HSPs) |
| | |
|
| [»] scaffold1674 (1 HSPs) |
| | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
| [»] scaffold0025 (1 HSPs) |
| | |
|
| [»] scaffold0011 (1 HSPs) |
| | |
|
| [»] scaffold1908 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 18366773 - 18366666
Alignment:
| Q |
119 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18366773 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
18366674 |
T |
|
| Q |
219 |
cctatcag |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
18366673 |
cctatcag |
18366666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 18372037 - 18371930
Alignment:
| Q |
119 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18372037 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
18371938 |
T |
|
| Q |
219 |
cctatcag |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
18371937 |
cctatcag |
18371930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 18376327 - 18376220
Alignment:
| Q |
119 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18376327 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
18376228 |
T |
|
| Q |
219 |
cctatcag |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
18376227 |
cctatcag |
18376220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 33310221 - 33310134
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33310221 |
agacgaccaccactccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
33310134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 26067342 - 26067429
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26067342 |
agacgaccaccgctccagtaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
26067429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15533885 - 15533972
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
15533885 |
agacgaccaccgctccactaggcatcactctcatggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
15533972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 3631226 - 3631312
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagca |
104 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3631226 |
agacaaccaccgctccactaggcatcacccccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagca |
3631312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 3395308 - 3395245
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctcca |
81 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
3395308 |
agacgaccaccgctccactaggcatcattcccaaggtgagacacatcacattcttcatcctcca |
3395245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 26944520 - 26944449
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||||||| | |||||||||||||| |||| ||||||||| |
|
|
| T |
26944520 |
agacgaacaccgctctactaggcatcactcccaaggtgaaaaacatcaccttcttcatcctttaaacaacac |
26944449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 11137404 - 11137349
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttc |
73 |
Q |
| |
|
|||||| |||||||| | |||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
11137404 |
agacgatcaccgctctataaggcatcattcccaaggtgagaaacatcaccttcttc |
11137349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 16568229 - 16568167
Alignment:
| Q |
25 |
caccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||||| || |||||||||| ||||||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
16568229 |
caccgctctacaaggcatcaataccaaggtgagaaccctcaccttcatcttcctcccaacaac |
16568167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 5407974 - 5408043
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||| |||| ||| || |||||||||| ||||||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
5407974 |
agacgaacaccactctacaaggcatcaataccaaggtgagaaccctcaccttcatcttcctcccaacaac |
5408043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 5412299 - 5412368
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||| |||| ||| || |||||||||| ||||||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
5412299 |
agacgaacaccactctacaaggcatcaataccaaggtgagaaccctcaccttcatcttcctcccaacaac |
5412368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 2975810 - 2975917
Alignment:
| Q |
119 |
tcactgaatagcttgatatgttttttgtgcctgcttatgaaaaatgtcgttgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
218 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2975810 |
tcactgattagcttgatatgttttttgtgcctgcttatgaaaaatgtcattgttttgacaccctgtgatggtgcaatttctgtatcaggctgaatttgat |
2975909 |
T |
|
| Q |
219 |
cctatcag |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
2975910 |
cctatcag |
2975917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 43080989 - 43080902
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43080989 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
43080902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 18812095 - 18812008
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18812095 |
agacgaccaccgcttcactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
18812008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 27828372 - 27828285
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27828372 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcatcttcttcatcctccaaacaacaccacaccatcagagcac |
27828285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 15069953 - 15069870
Alignment:
| Q |
22 |
gaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
15069953 |
gaccaccgctccactaggcatcaatcccaaggtgagatccatcaccttcttcatcctccaaacaacaccacaccatcaaagcac |
15069870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 41383703 - 41383618
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagca |
104 |
Q |
| |
|
|||||| |||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
41383703 |
agacgatcaccgctccactaggcatcactctcaaggtgagacacatcaccttcatcatcctccaaacaa-accacaccatcagagca |
41383618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 21481546 - 21481478
Alignment:
| Q |
19 |
gacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||||||||||| | ||||| || ||||||||||||| |||||||||||||| ||||||| ||||| |
|
|
| T |
21481546 |
gacgaccaccgctctatcaggcaacactcccaaggtgagaaacatcaccttcttcatcctccatacaac |
21481478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 34255403 - 34255472
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||| |||| |||||| |||||||||| ||||||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
34255403 |
agacgaacaccactccacaaggcatcaataccaaggtgagaaccctcaccttcatcttcctcccaacaac |
34255472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 17848913 - 17848859
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttctt |
72 |
Q |
| |
|
||||||||||||||| || |||||| | ||||||||||||| ||||||| ||||| |
|
|
| T |
17848913 |
agacgaccaccgctctacaaggcataattcccaaggtgagaaacatcactttctt |
17848859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 7350598 - 7350685
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7350598 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
7350685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 1048236 - 1048323
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1048236 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
1048323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 22136138 - 22136057
Alignment:
| Q |
24 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22136138 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
22136057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 40551165 - 40551084
Alignment:
| Q |
24 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40551165 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
40551084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 7093408 - 7093495
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7093408 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
7093495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 31157232 - 31157319
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31157232 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
31157319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 38395325 - 38395238
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
38395325 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
38395238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 4294000 - 4294087
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4294000 |
agacgaccaccgctccactaggcatcattctcaagttgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
4294087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 7471264 - 7471351
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7471264 |
agacgatcaccgctccactaggcatcactctcaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
7471351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 20298320 - 20298233
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20298320 |
agacgaccaccgttccactaggcatcactcccaaggtgagacatatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
20298233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 24749584 - 24749505
Alignment:
| Q |
26 |
accgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
24749584 |
accgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcttccaaacaacaccacaccatcagagcac |
24749505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 28486570 - 28486483
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
28486570 |
agacgaccaccgctccacaaggcatcaatctcaaggtgagacacatcaccttcttcattctccaaacaacaccacaccatcagagcac |
28486483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 44725924 - 44725837
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44725924 |
agacgaacaccgctccactaggcatcactcccaaggtgagacacatcaccatcttcgtcctccaaacaacaccacaccatcagagcac |
44725837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 21679060 - 21678980
Alignment:
| Q |
22 |
gaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagag |
102 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
21679060 |
gaccaccgctccactaggcatcattctcaaggtgagacacatcaccttcttcatcctccaaacaacactacgccatcagag |
21678980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 36772 - 36704
Alignment:
| Q |
37 |
aggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
36772 |
aggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccattagagcac |
36704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 9679663 - 9679584
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccat |
97 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||| |||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
9679663 |
agacaaccaccgctccactaggtatcactcctaaggtgagacacatcatcttcttcatcctccaaacaacaccacaccat |
9679584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 24816310 - 24816381
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
24816310 |
agacgaccaccgctctacaaggcatcactcccaaggtgagacacatcacattcttcatcctccaaacaacac |
24816381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 48490675 - 48490606
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
||||||||||| |||||| |||||||||| | ||||||||| || |||||||| || |||| | |||||| |
|
|
| T |
48490675 |
agacgaccaccactccacaaggcatcaatactaaggtgagaaacctcaccttcatcatcctgccaacaac |
48490606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 31544065 - 31543978
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31544065 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
31543978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 10751030 - 10750943
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10751030 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
10750943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15355796 - 15355883
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15355796 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcaaagcac |
15355883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 23666372 - 23666291
Alignment:
| Q |
24 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23666372 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
23666291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 659014 - 658927
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
659014 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
658927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 27911428 - 27911341
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27911428 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacgtcaccttcttcatcctccaaacaacaccacaccatcagagcac |
27911341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 34478366 - 34478453
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
34478366 |
agacgatcaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
34478453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 31467178 - 31467263
Alignment:
| Q |
20 |
acgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31467178 |
acgaccaccgctccactaggcatcaatcccaaagtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
31467263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 18468019 - 18467932
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
18468019 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcatagcac |
18467932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 20043968 - 20043881
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20043968 |
agacgaccaccgctccactaggaatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
20043881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 25806426 - 25806350
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacac |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25806426 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacac |
25806350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 6746403 - 6746316
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6746403 |
agacgaacaccgctccactaggcatcaatcctaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccattagagcac |
6746316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 20505150 - 20505237
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20505150 |
agacgaccaccactccactaggcatcaacctcaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
20505237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 18510697 - 18510784
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||| || |||||||||||||||||||||||||||| |
|
|
| T |
18510697 |
agacgaacaccgctccactaggcatcactcccaaggtgagacacatcatcttattcatcgtccaaacaacaccacaccatcagagcac |
18510784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16933095 - 16933182
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16933095 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
16933182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 22781684 - 22781771
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22781684 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
22781771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 5099869 - 5099782
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5099869 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
5099782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 11007515 - 11007602
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
11007515 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatccttcaaacaacaccacaccatcagagcac |
11007602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 22133564 - 22133651
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22133564 |
agacgatcaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
22133651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 14788716 - 14788803
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
14788716 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctcgaaacaacaccacaccatcagagcac |
14788803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 22045667 - 22045749
Alignment:
| Q |
23 |
accaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22045667 |
accaccgctccactaggcatcaatcccaaggtgagatacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
22045749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 9175420 - 9175504
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
9175420 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaagcaacaccacaccattagag |
9175504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 22802020 - 22802107
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
22802020 |
agacgaccaccactccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccattagagcac |
22802107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 36920781 - 36920868
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
36920781 |
agacgatcaccgctccactaggcatcaatctcaaggtgagacacatcacattcttcatcctccaaacatcaccacaccatcagagcac |
36920868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 47563805 - 47563718
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||| |||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
47563805 |
agacgaccaccgctctactatgtatcaatcccaaggtgagacacatcacattcttcatcctccaaacaacaccacaccatcagagcac |
47563718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12399765 - 12399852
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||| |||| |
|
|
| T |
12399765 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacgcatcaccttcttcatccagcaaaaaacaccacaccatcagtgcac |
12399852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 16454353 - 16454266
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||| |||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16454353 |
agacaaccaccgctctaacaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
16454266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12402040 - 12402127
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||| |||| |
|
|
| T |
12402040 |
agacgaccaccgcttcactaggcatcaatcccaaggtgagacacatcaccttcttcatccagcaaaaaacactacaccatcagtgcac |
12402127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 36379276 - 36379193
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcaga |
101 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
36379276 |
agacgaccaccgctccactaggcatcattcccaaggtgagaaaaatcgtcttcttcatcctccaaacaacattacaccgtcaga |
36379193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 18536788 - 18536859
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||||||| |||| || |||||||| || |||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
18536788 |
agacgaccaacgctttaccaggcatcactcacaaggtgagaaacatcaccttcttcatcctccaaacaacac |
18536859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 457218 - 457131
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
457218 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
457131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 5898723 - 5898636
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5898723 |
agacgactaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
5898636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 6064740 - 6064827
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6064740 |
agacgaacaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
6064827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 53916957 - 53917044
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
53916957 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctacaaacaacaccacaccatcagagcac |
53917044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 11169412 - 11169327
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagc |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11169412 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacatatcaccttcttcatcctccaaacaacaccacaccatcagagc |
11169327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 18098115 - 18098202
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18098115 |
agacgaccaccgctccactagacatcaatctcaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
18098202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 43227391 - 43227304
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43227391 |
agacgatcaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
43227304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 10957270 - 10957357
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10957270 |
agacgatcaccactccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
10957357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 3315657 - 3315570
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3315657 |
agacgaccacctctccactaagcatcattcccaaggtgagatacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
3315570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 4309454 - 4309541
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4309454 |
agacgaccactactccactaggcatcactcccaaagtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
4309541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 43422755 - 43422840
Alignment:
| Q |
20 |
acgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43422755 |
acgaccaccgttccactaggcatcactctcaaggtgagacagatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
43422840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 42991267 - 42991187
Alignment:
| Q |
25 |
caccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
42991267 |
caccgctccattaggcatcacttccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
42991187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 891192 - 891277
Alignment:
| Q |
20 |
acgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| || ||||||||||||||||||| |||||||| |
|
|
| T |
891192 |
acgaccaccgctccactaggcatcactccaaaggcgagacacatcaccttcttcatcttccaaacaacaccacaccaccagagcac |
891277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 28101295 - 28101375
Alignment:
| Q |
22 |
gaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagag |
102 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
28101295 |
gaccaccgctccactaggcatcattttcaaggtgagacatatcaccttcttcatcctccaaacaacaccacaccatcagag |
28101375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23634738 - 23634667
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
23634738 |
agacgaccaccgctctaccatacatcaatcccaaggtgagacacatcaccttcttcatcctccaaaaaacac |
23634667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 25634806 - 25634738
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||||||||||| ||||||||||| || |||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
25634806 |
agacgaccaccgc---actaggcatcattcacaaggtgagaaacatcaccttcttcatcctccaaacaacac |
25634738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23199036 - 23199105
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaac |
87 |
Q |
| |
|
|||||| |||| ||| || |||||||||| ||||||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
23199036 |
agacgaacaccactctacaaggcatcaataccaaggtgagaaccctcaccttcatcttcctcccaacaac |
23199105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 7769814 - 7769766
Alignment:
| Q |
25 |
caccgctccactaggcatcaatcccaaggtgagacacatcaccttcttc |
73 |
Q |
| |
|
|||||||| || |||||||| || |||||||||| |||||||||||||| |
|
|
| T |
7769814 |
caccgctctacaaggcatcattcacaaggtgagaaacatcaccttcttc |
7769766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 16227500 - 16227413
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16227500 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
16227413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 47178694 - 47178607
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
47178694 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
47178607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 51751369 - 51751282
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
51751369 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
51751282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 27338077 - 27338164
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27338077 |
agacgaccaccgctccactaggaatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
27338164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 6996580 - 6996493
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6996580 |
agacgaccaccgctccactaggcatcaatccaaatgtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
6996493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 20301463 - 20301376
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
20301463 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacatcatcagagcac |
20301376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 31736761 - 31736846
Alignment:
| Q |
20 |
acgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31736761 |
acgaccaccgcttcactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
31736846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 28841721 - 28841634
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28841721 |
agacgaccatcgctccactacgcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
28841634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 28997538 - 28997626
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcaca |
106 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28997538 |
agacgaccgccgctccactaggcatcactgccaaggtgtgacacatcaccttcttcatcctccaaacaacaccacaccatcagagcaca |
28997626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 29003254 - 29003341
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29003254 |
agacgaccgccgctccactaggcatcactgccaaggtgtgacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
29003341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 31424317 - 31424404
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
31424317 |
agacgaccaccgctccactaggaatcactcccaagatgagacacatcaccttcttcatcctccaaacaataccacaccatcagagcac |
31424404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 16429939 - 16429856
Alignment:
| Q |
22 |
gaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
16429939 |
gaccaccgttccactaggcatcactcccaaggtgagacacatcacctttttcatcctccaaacaacaccacaccaccagagcac |
16429856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 25250568 - 25250651
Alignment:
| Q |
22 |
gaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25250568 |
gaccaccgctccactaggcatcattctcaaggtgagacacatcacattcttcaccctccaaacaacaccacaccatcagagcac |
25250651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 50078089 - 50078164
Alignment:
| Q |
30 |
ctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
50078089 |
ctccaataggaatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
50078164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 28202651 - 28202731
Alignment:
| Q |
25 |
caccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28202651 |
caccgctctactaggcatcactcccaaggtgagacacatcaacttattcatcctccaaacaacaccacaccatcagagcac |
28202731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 13126684 - 13126755
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||||||||| ||||| |||||||| |||||| |||||||| |
|
|
| T |
13126684 |
agacgaccaccgctctacaaggcatcactcccaaggtgagaaacatcgccttcttcatcctcccaacaacac |
13126755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 50168248 - 50168318
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaaca |
88 |
Q |
| |
|
||||||||||||||| || |||||||||| ||||||||||| || |||||||||| |||||| ||||||| |
|
|
| T |
50168248 |
agacgaccaccgctctacaaggcatcaataccaaggtgagaaacctcaccttctttatcctcccaacaaca |
50168318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 8348039 - 8348088
Alignment:
| Q |
40 |
catcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacac |
89 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
8348039 |
catcactcccaaggtgagaaacatcaccttcttcatcctccaaacaacac |
8348088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 23452 - 23371
Alignment:
| Q |
24 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23452 |
ccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
23371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1899 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1899
Description:
Target: scaffold1899; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 956 - 869
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
956 |
agacgaccaccgctccactaggcatcaatctcaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1674 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1674
Description:
Target: scaffold1674; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 735 - 822
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
735 |
agacgaacaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 80862 - 80779
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcaga |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
80862 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcaga |
80779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 19503283 - 19503370
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19503283 |
agacgaccactgctccactaggcatcaatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
19503370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 35216917 - 35217004
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216917 |
agacgaccaccgcttcactaggcatcaatcccaaggtgagacacatcacctttttcttcctccaaacaacaccacaccatcagagcac |
35217004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 36560091 - 36560178
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
36560091 |
agacgaccaccgctccactaggcatcaatcccaaggcgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
36560178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 21519641 - 21519728
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21519641 |
agacgaacaccgctctactaggcatcactcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcagagcac |
21519728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 31734162 - 31734249
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31734162 |
agacgaccaccgctccactaggcatcattcccaaggtgagaaacatcaccttctttatcctccaaacaacaccacaccatcagagcac |
31734249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 6263437 - 6263524
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
6263437 |
agacgaccaccactccaccaggtatcaatcccaaggtgagggacatcaccttcttcatcctccaaacaacgccacaccatcagagcac |
6263524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 14634896 - 14634966
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaaca |
88 |
Q |
| |
|
|||||| |||||||| || |||||||||| ||||||||||| | ||||| ||||| |||||| ||||||| |
|
|
| T |
14634896 |
agacgatcaccgctctacaaggcatcaataccaaggtgagaaccctcaccctcttcatcctcccaacaaca |
14634966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22402304 - 22402266
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtga |
56 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
22402304 |
agacgaccaccgctccactaggcatcattctcaaggtga |
22402266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 51014 - 50927
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
51014 |
agacgaccaccgctccactaggcatcactcccaaggtgagacacatcaccttcttcatcctcgaaacaacaccacaccatcagagcac |
50927 |
T |
|
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Target: scaffold0025 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 72466 - 72549
Alignment:
| Q |
23 |
accaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcaca |
106 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
72466 |
accaccgctccactaggcatccatcccaaggtgagacacatcaccttcttcatcctccaaacaacaccacaccatcaaagcaca |
72549 |
T |
|
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Target: scaffold0011 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 34890 - 34803
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttcttcttcctccaaacaacaccacaccatcagagcac |
105 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
34890 |
agacgaccaccgctccactaggcatcactcccaacgtgagacacatcaccttcttcatcctccaaacaacgccacaccatcagagcac |
34803 |
T |
|
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Target: scaffold1908 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1908
Description:
Target: scaffold1908; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 633 - 581
Alignment:
| Q |
18 |
agacgaccaccgctccactaggcatcaatcccaaggtgagacacatcaccttc |
70 |
Q |
| |
|
|||||| |||||||| || |||||||||| ||||||||||| || |||||||| |
|
|
| T |
633 |
agacgatcaccgctctacaaggcatcaataccaaggtgagagacctcaccttc |
581 |
T |
|
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