View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15291_low_9 (Length: 225)

Name: NF15291_low_9
Description: NF15291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15291_low_9
NF15291_low_9
[»] chr5 (24 HSPs)
chr5 (1-225)||(33467991-33468215)
chr5 (5-105)||(20068923-20069023)
chr5 (1-65)||(22482238-22482302)
chr5 (1-88)||(2483713-2483800)
chr5 (1-68)||(22811072-22811139)
chr5 (5-133)||(8049054-8049182)
chr5 (5-133)||(39987970-39988098)
chr5 (5-153)||(7178739-7178886)
chr5 (5-65)||(40495361-40495421)
chr5 (1-60)||(24036627-24036686)
chr5 (5-65)||(3667903-3667963)
chr5 (5-65)||(5710389-5710449)
chr5 (5-65)||(35760238-35760298)
chr5 (5-65)||(41834941-41835001)
chr5 (16-63)||(19784864-19784911)
chr5 (1-39)||(2694759-2694797)
chr5 (11-65)||(9275493-9275547)
chr5 (1-70)||(2294902-2294971)
chr5 (10-63)||(2868361-2868414)
chr5 (11-52)||(4569089-4569130)
chr5 (26-71)||(43045198-43045243)
chr5 (5-65)||(4292198-4292258)
chr5 (5-65)||(13253086-13253145)
chr5 (25-69)||(43152386-43152430)
[»] chr1 (32 HSPs)
chr1 (3-225)||(43730049-43730271)
chr1 (1-65)||(20800280-20800344)
chr1 (1-65)||(35569205-35569269)
chr1 (1-68)||(4347030-4347096)
chr1 (5-153)||(15884197-15884346)
chr1 (5-65)||(13056056-13056116)
chr1 (1-147)||(4369806-4369951)
chr1 (1-68)||(25061282-25061349)
chr1 (16-65)||(48510967-48511016)
chr1 (5-65)||(1199886-1199946)
chr1 (5-65)||(31223433-31223493)
chr1 (1-146)||(7826357-7826502)
chr1 (1-59)||(47085898-47085956)
chr1 (3-68)||(5930816-5930881)
chr1 (16-65)||(29759710-29759759)
chr1 (16-65)||(42850237-42850286)
chr1 (5-65)||(5410698-5410758)
chr1 (5-65)||(10470649-10470708)
chr1 (5-65)||(12468271-12468331)
chr1 (1-61)||(13344836-13344895)
chr1 (16-64)||(40352451-40352499)
chr1 (9-65)||(40709235-40709290)
chr1 (5-65)||(50977347-50977407)
chr1 (5-106)||(25230025-25230125)
chr1 (1-63)||(27801655-27801717)
chr1 (18-68)||(47981815-47981865)
chr1 (1-65)||(40229473-40229537)
chr1 (5-53)||(11561893-11561941)
chr1 (16-60)||(32365143-32365187)
chr1 (5-65)||(47123445-47123505)
chr1 (3-63)||(47978366-47978426)
chr1 (5-65)||(49242989-49243049)
[»] chr6 (16 HSPs)
chr6 (3-225)||(29682042-29682264)
chr6 (1-213)||(16122003-16122212)
chr6 (11-65)||(16548174-16548228)
chr6 (5-106)||(10826085-10826186)
chr6 (16-72)||(1499984-1500040)
chr6 (1-65)||(16442352-16442416)
chr6 (5-148)||(21254885-21255027)
chr6 (1-67)||(3605754-3605819)
chr6 (5-59)||(17830004-17830058)
chr6 (5-106)||(1312445-1312546)
chr6 (81-148)||(44992-45058)
chr6 (5-148)||(33899011-33899154)
chr6 (1-147)||(5584051-5584196)
chr6 (16-70)||(8551109-8551163)
chr6 (5-147)||(29409257-29409399)
chr6 (1-65)||(6208065-6208128)
[»] chr2 (33 HSPs)
chr2 (3-225)||(30599906-30600128)
chr2 (1-153)||(3853856-3854008)
chr2 (1-153)||(18511058-18511210)
chr2 (1-68)||(23359930-23359997)
chr2 (5-65)||(1945043-1945103)
chr2 (5-148)||(25747886-25748028)
chr2 (11-70)||(26806265-26806324)
chr2 (18-68)||(23377545-23377595)
chr2 (5-65)||(34433310-34433370)
chr2 (1-64)||(27911451-27911514)
chr2 (3-65)||(5916244-5916305)
chr2 (3-65)||(36312321-36312382)
chr2 (16-65)||(12110918-12110967)
chr2 (25-70)||(14531978-14532023)
chr2 (16-153)||(16467042-16467179)
chr2 (11-64)||(42089538-42089591)
chr2 (5-65)||(2213550-2213610)
chr2 (5-65)||(2213691-2213751)
chr2 (5-65)||(8170357-8170416)
chr2 (5-65)||(9988505-9988565)
chr2 (3-63)||(10918649-10918709)
chr2 (5-65)||(28127291-28127351)
chr2 (5-61)||(30007557-30007613)
chr2 (5-65)||(38600447-38600507)
chr2 (5-65)||(41580714-41580774)
chr2 (26-65)||(16518869-16518908)
chr2 (5-64)||(31224725-31224784)
chr2 (16-65)||(11759804-11759853)
chr2 (16-68)||(1763261-1763313)
chr2 (6-65)||(2215296-2215355)
chr2 (5-65)||(7296199-7296259)
chr2 (5-65)||(28261338-28261398)
chr2 (18-70)||(42770413-42770465)
[»] chr8 (24 HSPs)
chr8 (1-225)||(26490816-26491040)
chr8 (1-153)||(31246317-31246469)
chr8 (1-148)||(3619071-3619217)
chr8 (5-105)||(23018099-23018199)
chr8 (5-132)||(3467509-3467636)
chr8 (16-68)||(19649226-19649278)
chr8 (5-65)||(22936799-22936859)
chr8 (16-70)||(29970840-29970894)
chr8 (16-153)||(15206651-15206788)
chr8 (16-65)||(43550934-43550983)
chr8 (5-65)||(40742167-40742227)
chr8 (16-59)||(10552926-10552969)
chr8 (1-65)||(28425474-28425538)
chr8 (5-65)||(41289064-41289124)
chr8 (1-64)||(36779435-36779497)
chr8 (1-64)||(41891822-41891884)
chr8 (11-65)||(440201-440255)
chr8 (1-63)||(22552742-22552804)
chr8 (10-68)||(33588760-33588818)
chr8 (3-64)||(39219765-39219826)
chr8 (5-65)||(6399114-6399174)
chr8 (5-53)||(30759311-30759359)
chr8 (1-65)||(35239541-35239605)
chr8 (1-64)||(42149049-42149112)
[»] chr7 (30 HSPs)
chr7 (16-225)||(41625517-41625726)
chr7 (1-153)||(42752180-42752332)
chr7 (1-153)||(39634154-39634306)
chr7 (5-65)||(48459766-48459826)
chr7 (11-65)||(38230124-38230178)
chr7 (5-65)||(3375546-3375606)
chr7 (5-65)||(3622453-3622513)
chr7 (5-65)||(3750742-3750802)
chr7 (5-61)||(10371951-10372007)
chr7 (5-65)||(44967392-44967452)
chr7 (16-70)||(4228598-4228652)
chr7 (16-70)||(20088920-20088974)
chr7 (5-62)||(37639489-37639546)
chr7 (5-65)||(34365975-34366035)
chr7 (5-65)||(47021975-47022035)
chr7 (1-68)||(1766478-1766545)
chr7 (1-68)||(38494269-38494336)
chr7 (5-64)||(42740449-42740508)
chr7 (1-63)||(16079460-16079522)
chr7 (11-65)||(37562626-37562680)
chr7 (1-63)||(41715715-41715777)
chr7 (16-53)||(24770915-24770952)
chr7 (15-72)||(26975300-26975357)
chr7 (16-61)||(33746449-33746494)
chr7 (5-70)||(36920171-36920236)
chr7 (1-65)||(39391126-39391190)
chr7 (16-64)||(386485-386533)
chr7 (5-65)||(3342846-3342906)
chr7 (11-63)||(32186998-32187050)
chr7 (1-65)||(45557456-45557520)
[»] chr4 (43 HSPs)
chr4 (1-225)||(26824220-26824444)
chr4 (1-153)||(54488537-54488689)
chr4 (1-153)||(38305943-38306095)
chr4 (1-68)||(22699759-22699826)
chr4 (1-68)||(22980704-22980771)
chr4 (1-68)||(22994291-22994358)
chr4 (1-64)||(48550429-48550492)
chr4 (5-65)||(16566325-16566385)
chr4 (1-64)||(36150625-36150688)
chr4 (1-64)||(42944900-42944963)
chr4 (1-68)||(46958040-46958107)
chr4 (5-65)||(13167545-13167605)
chr4 (5-65)||(26651854-26651914)
chr4 (5-65)||(51922960-51923020)
chr4 (5-65)||(54487226-54487286)
chr4 (16-106)||(6138637-6138727)
chr4 (1-66)||(4954053-4954118)
chr4 (16-65)||(46830086-46830135)
chr4 (5-106)||(49519709-49519810)
chr4 (1-65)||(20677069-20677133)
chr4 (16-68)||(28947766-28947818)
chr4 (5-65)||(29149313-29149373)
chr4 (5-65)||(39187754-39187814)
chr4 (5-65)||(39636805-39636865)
chr4 (9-65)||(40286302-40286358)
chr4 (5-65)||(43772129-43772189)
chr4 (5-65)||(55638761-55638821)
chr4 (5-68)||(14564152-14564215)
chr4 (5-60)||(33574203-33574258)
chr4 (1-64)||(33843803-33843866)
chr4 (23-65)||(2171880-2171922)
chr4 (1-67)||(5025547-5025612)
chr4 (11-65)||(19592243-19592297)
chr4 (1-63)||(48550239-48550301)
chr4 (13-70)||(14597638-14597695)
chr4 (11-148)||(56241847-56241984)
chr4 (5-65)||(14072523-14072582)
chr4 (5-65)||(15619634-15619694)
chr4 (1-65)||(16492947-16493011)
chr4 (5-65)||(25312735-25312795)
chr4 (5-65)||(49136542-49136602)
chr4 (5-65)||(54150546-54150606)
chr4 (16-52)||(54153077-54153113)
[»] chr3 (36 HSPs)
chr3 (1-153)||(49526671-49526823)
chr3 (3-68)||(7012672-7012737)
chr3 (5-65)||(15511382-15511442)
chr3 (5-65)||(23496352-23496412)
chr3 (1-65)||(31084242-31084306)
chr3 (5-65)||(50664793-50664853)
chr3 (3-70)||(23918872-23918939)
chr3 (1-67)||(10852715-10852781)
chr3 (16-65)||(52931589-52931638)
chr3 (5-65)||(34561143-34561203)
chr3 (5-64)||(10853273-10853332)
chr3 (1-64)||(14651104-14651166)
chr3 (5-64)||(19877453-19877512)
chr3 (5-64)||(38340841-38340900)
chr3 (16-65)||(3348278-3348327)
chr3 (18-147)||(25847986-25848114)
chr3 (1-66)||(44225599-44225663)
chr3 (16-65)||(53179883-53179932)
chr3 (5-65)||(10334173-10334233)
chr3 (5-65)||(21225025-21225085)
chr3 (5-65)||(26519699-26519759)
chr3 (5-65)||(38172313-38172373)
chr3 (16-64)||(42644298-42644346)
chr3 (5-65)||(48189448-48189507)
chr3 (16-72)||(53567960-53568016)
chr3 (1-68)||(25181242-25181308)
chr3 (1-60)||(29252127-29252186)
chr3 (1-68)||(41459247-41459314)
chr3 (5-106)||(30811538-30811638)
chr3 (5-106)||(35425328-35425428)
chr3 (16-65)||(4984616-4984665)
chr3 (9-70)||(52736794-52736855)
chr3 (1-66)||(52966811-52966876)
chr3 (5-65)||(8424736-8424795)
chr3 (1-65)||(23207070-23207134)
chr3 (1-53)||(30809947-30809999)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-105)||(301520-301620)
[»] scaffold0172 (1 HSPs)
scaffold0172 (16-65)||(15274-15323)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-68)||(199381-199438)
[»] scaffold0369 (1 HSPs)
scaffold0369 (5-65)||(8484-8544)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-65)||(118416-118476)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-65)||(29129-29188)
[»] scaffold0005 (2 HSPs)
scaffold0005 (5-68)||(253160-253223)
scaffold0005 (13-70)||(219683-219740)
[»] scaffold0394 (1 HSPs)
scaffold0394 (5-51)||(5836-5882)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-64)||(65536-65584)


Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33467991 - 33468215
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33467991 tgattttgatagaactgattttggttaaaagtgagttgagtgtatattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 33468090  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatt 200  Q
    |||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33468091 tttggatggttgagatcaaaattgtttttgaaggtataattactaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatt 33468190  T
Q  201 taaaatatacaacagaaattcaaat 225  Q
    |||||||||||||||||||||||||    
T  33468191 taaaatatacaacagaaattcaaat 33468215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 20069023 - 20068923
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    |||||| ||| |||||||||| ||||||||||||||| |||||| |||| |||||||||||  | ||||| || |||||||| |||||| ||||||||||    
T  20069023 tttgatcgaattgattttggtcaaaagtgagttgagtttaaatttatttatgtttggatacactaatgcaaaagtgattcttgttaattgattttgtttg 20068924  T
Q  105 g 105  Q
    |    
T  20068923 g 20068923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22482302 - 22482238
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  22482302 tgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 22482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2483713 - 2483800
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttat 88  Q
    |||||||| | ||| ||||||| |||||||||||||||| ||| ||||||||| |||||||||| ||||| ||| || ||||||||||    
T  2483713 tgattttgttggaattgattttagttaaaagtgagttgaatgtgaattgatttatgtttggataactttaagcaaaagtgattcttat 2483800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22811139 - 22811072
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||| ||| ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  22811139 tgatcttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 22811072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 8049054 - 8049182
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgttt 103  Q
    ||||| |||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||  ||||  | || |||||||||| | ||  | ||||||    
T  8049054 tttgagagaattgattttggttaaaagtgagtttgag-gttaattgatttatgtttggatacacttatttaaaagtgattcttatgagttgttgttgttt 8049152  T
Q  104 ggacggttgagatcaaaattgcttttaaag 133  Q
    ||| | || | |||||||||||||||||||    
T  8049153 ggatgatttaaatcaaaattgcttttaaag 8049182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 39987970 - 39988098
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgttt 103  Q
    ||||| |||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||  ||||  | || |||||||||| | || || ||||||    
T  39987970 tttgagagaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatacacttatttaaaagtgattcttatgagttgatgttgttt 39988068  T
Q  104 ggacggttgagatcaaaattgcttttaaag 133  Q
    ||| | || | ||||||||| |||||||||    
T  39988069 ggatgatttaaatcaaaatttcttttaaag 39988098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 7178886 - 7178739
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| | ||||||  |||||||||||||| ||||| ||||||| |||||||||||  | |   | || |||||||||| ||||||| |||||||    
T  7178886 tttgagagaattaattttgactaaaagtgagttgaatgtaa-ttgatttatgtttggatacaataacctaaaattgattcttatcaatttatgttgtttg 7178788  T
Q  105 gacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    |   |||   ||||||||||||||| || ||||||||||||||| ||||    
T  7178787 ggtagtttgaatcaaaattgcttttgaaagtataattaccaaaatgggt 7178739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 40495361 - 40495421
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| || ||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  40495361 tttgatataattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatac 40495421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24036686 - 24036627
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttg 60  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||| ||||||    
T  24036686 tgattttgatagaattgattttgatgaaaagtgagttgaatgtaaaatgatttatgtttg 24036627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3667963 - 3667903
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  3667963 tttgagagaattgattttgttaaaaagtgagttgaatgtgaattgatttatgtttggatac 3667903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 5710389 - 5710449
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||  |||| ||||| ||| |||||||||||    
T  5710389 tttgaaagaattgattttggttaaaagtgagtttggtgtgaattgctttatgtttggatac 5710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 35760298 - 35760238
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  35760298 tttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 35760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 41835001 - 41834941
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||   || ||||||||| |||||||||||    
T  41835001 tttgagagaattgattttggttaaaagtgagttggaagtgaattgatttatgtttggatac 41834941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19784911 - 19784864
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    |||||||||||||||||||||||| |||||| || ||| |||||||||    
T  19784911 tgattttggttaaaagtgagttgaatgtaaagtggtttatgtttggat 19784864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2694759 - 2694797
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttga 39  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  2694759 tgattttgattgaattgattttggttaaaagtgagttga 2694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9275493 - 9275547
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| ||||||||||||||||||||||   ||| ||||||||| |||||||||||    
T  9275493 agaattgattttggttaaaagtgagttagatgttaattgatttatgtttggatac 9275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2294902 - 2294971
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||||||||||||| |||||| | ||| |||||||||||||| | | |||||| || ||||||| |||||    
T  2294902 tgattttgatagaattgatttcgattagaagtgagttgagtgaagagtgatttatgcttggatatcttta 2294971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 2868361 - 2868414
Alignment:
Q  10 tagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    ||||| ||||||| |||||||||||||||| |||||| ||||||  ||||||||    
T  2868361 tagaattgattttagttaaaagtgagttgaatgtaaagtgatttaagtttggat 2868414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 4569089 - 4569130
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatt 52  Q
    |||| |||||||| ||||||||||||||||||| ||||||||    
T  4569089 agaattgattttgattaaaagtgagttgagtgtgaattgatt 4569130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 43045198 - 43045243
Alignment:
Q  26 taaaagtgagttgagtgtaaattgatttgtgtttggatacctttat 71  Q
    |||||||||||| |||||||||| |||| ||||| |||||||||||    
T  43045198 taaaagtgagtttagtgtaaattaatttatgtttagatacctttat 43045243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 4292258 - 4292198
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| |||||| | |||||| ||| ||||||||| |||||||||||    
T  4292258 tttgagagaattgattttgattaaaaataagttgaatgtgaattgatttatgtttggatac 4292198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 13253086 - 13253145
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| | | |||||| || |||||||||||    
T  13253086 tttgaaagaattgattttggttaaaagtgagttgaatatgaattga-ttatgtttggatac 13253145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 43152386 - 43152430
Alignment:
Q  25 ttaaaagtgagttgagtgtaaattgatttgtgtttggataccttt 69  Q
    ||||||||||||||| || ||| |||||| |||||||||||||||    
T  43152386 ttaaaagtgagttgaatgaaaagtgatttatgtttggataccttt 43152430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 43730049 - 43730271
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtt 102  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  43730049 attttgatataattgattttggttaaaagtgagttgagtgtcaattgatttgtgtttggatacctttatgcataagtgattcttattaatttattttgtt 43730148  T
Q  103 tggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactattta 202  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43730149 tggatggttgagatcaaaattgtttttgaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactattta 43730248  T
Q  203 aaatatacaacagaaattcaaat 225  Q
    |||||||||||||||||| ||||    
T  43730249 aaatatacaacagaaatttaaat 43730271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20800280 - 20800344
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  20800280 tgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 20800344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35569205 - 35569269
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  35569205 tgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 35569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4347096 - 4347030
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  4347096 tgattttg-tagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 4347030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 15884346 - 15884197
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaa-tgattcttattaatttattttgttt 103  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |||||||||||  | | | | ||| ||||| |||| |||| || ||||||    
T  15884346 tttgacagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatacaataaagtaaaaagtgatttttataaattcatgttgttt 15884247  T
Q  104 ggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    |||  |||  ||||||||||| |||| || | ||||||||||||| ||||    
T  15884246 ggatagtttggatcaaaattgattttgaatgcataattaccaaaatgggt 15884197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13056116 - 13056056
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  13056116 tttgaaagaattgattttggttaaaagtgagttgagtgtgaattgatttatgtttgaatac 13056056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4369806 - 4369951
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||||| |||| | |   | || |||||||||| | || || |||    
T  4369806 tgattttgagagaattgattttggttaaaagtgagttga-tgtgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgagttgatgttg 4369904  T
Q  101 tttgga-cggttgagatcaaaattgcttttaaaggtataattaccaaa 147  Q
    ||||||  |||||| |||||||||| ||||||| || |||| ||||||    
T  4369905 tttggataggttga-atcaaaattgattttaaatgtgtaatgaccaaa 4369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25061349 - 25061282
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| | ||| ||||||||||||||||||||||||   ||||||||||| ||||||||||||||    
T  25061349 tgattttggttgaattgattttggttaaaagtgagttgaacataaattgatttatgtttggatacctt 25061282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 48511016 - 48510967
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  48511016 tgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 48510967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 1199946 - 1199886
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| | |||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  1199946 tttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 1199886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31223493 - 31223433
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  31223493 tttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 31223433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7826357 - 7826502
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttatttt 99  Q
    ||||||||| |||| |||||||||||||||||||| |||| ||| ||||||||| ||||||| |||| | |   | || |||||||||| |||| || ||    
T  7826357 tgattttgagagaattgattttggttaaaagtgagcttga-tgtgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgaattgatgtt 7826455  T
Q  100 gtttgga-cggttgagatcaaaattgcttttaaaggtataattaccaa 146  Q
    |||||||  |||||| |||||||||| ||||||| || |||| |||||    
T  7826456 gtttggataggttga-atcaaaattgattttaaatgtgtaatgaccaa 7826502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47085956 - 47085898
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgttt 59  Q
    |||||||||||||| |||||||  ||||||||||||||| ||| ||||||||| |||||    
T  47085956 tgattttgatagaattgattttaattaaaagtgagttgaatgtgaattgatttatgttt 47085898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 5930881 - 5930816
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||| ||||||| ||||||||||||||||| | |||| |||||| |||||| ||||||| ||||||    
T  5930881 atttagatagaattgattttggttaaaagtaaattgaatgtaaagtgatttatgtttggttacctt 5930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 29759759 - 29759710
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||||    
T  29759759 tgattatggttaaaagtgagttgaatgtaaaatgatttatgtttggatac 29759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 42850237 - 42850286
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  42850237 tgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 42850286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 5410758 - 5410698
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||  ||||||||||||| |||||| ||||    
T  5410758 tttgaaagaattgattttgattaaaagtgagttggatgtaaattgatttatgtttgaatac 5410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 10470708 - 10470649
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  10470708 tttgagagaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggatac 10470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 12468331 - 12468271
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| || ||||||||||||||||||||||   ||||||||||||| | |||||||||    
T  12468331 tttgatataattgattttggttaaaagtgagtttgatgtaaattgatttatatttggatac 12468271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13344895 - 13344836
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttgg 61  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||| |||||| |||||||    
T  13344895 tgattttg-tagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttgg 13344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 40352499 - 40352451
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||||||||||||||| | |||||| |||||| ||||||||||    
T  40352499 tgattttggttaaaagtgagtttaatgtaaagtgatttatgtttggata 40352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 40709290 - 40709235
Alignment:
Q  9 atagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||| |||||||| |||| |||||||||||||| ||||||||| |||||||||||    
T  40709290 atagaattgattttgattaatagtgagttgagtgt-aattgatttatgtttggatac 40709235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 50977347 - 50977407
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||  |||| ||||| ||| |||||||||||    
T  50977347 tttgaaagaattgattttggttaaaagtgagtttggtgtgaattgttttatgtttggatac 50977407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 25230125 - 25230025
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac-ctttatgcagaaatgattcttattaatttattttgttt 103  Q
    ||||| |||| ||||||| |||||||||||||||| ||| |||||| || ||||||||||| |||||   |||| |||||||||||| || || ||||||    
T  25230125 tttgagagaattgattttagttaaaagtgagttgaatgtgaattga-ttatgtttggatacacttta-atagaagtgattcttattagttgatgttgttt 25230028  T
Q  104 gga 106  Q
    |||    
T  25230027 gga 25230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27801655 - 27801717
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    ||||||| | |||| |||||||| |||||||||||||   ||||||||||||| |||||||||    
T  27801655 tgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 27801717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 47981815 - 47981865
Alignment:
Q  18 attttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||||||||||| |||||||| | |||| |||||| ||||||||||||||    
T  47981815 attttggttaaaattgagttgaatttaaagtgatttatgtttggatacctt 47981865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40229473 - 40229537
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||| | ||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  40229473 tgattttgttggaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 40229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 11561941 - 11561893
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgattt 53  Q
    ||||| |||| | |||||||||||||||||||||| ||| |||||||||    
T  11561941 tttgaaagaattaattttggttaaaagtgagttgaatgtgaattgattt 11561893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 32365187 - 32365143
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttg 60  Q
    ||||||| || ||||||||||||| ||||||||||||| ||||||    
T  32365187 tgattttagtcaaaagtgagttgaatgtaaattgatttatgtttg 32365143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 47123505 - 47123445
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| |||||||||||||   ||| ||||||||| |||||||||||    
T  47123505 tttgagagaattgattttgattaaaagtgagttagatgtgaattgatttttgtttggatac 47123445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 47978366 - 47978426
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    |||||||  ||| ||||||||| |||||||||||||| |||||| |||||| || ||||||    
T  47978366 attttgagtgaattgattttgggtaaaagtgagttgaatgtaaagtgatttatggttggat 47978426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 49242989 - 49243049
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||| |||||||  ||| ||||||||| |||||| ||||    
T  49242989 tttgagagaattgattttggttaaaaatgagttggatgtgaattgatttatgtttgaatac 49243049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 3 - 225
Target Start/End: Complemental strand, 29682264 - 29682042
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtt 102  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29682264 attttgatagaattgattttggttaaaattgagttgcgtgtaaattgatttgtgtttggatacttttatgcagaagtgattcttattaatttattttgtt 29682165  T
Q  103 tggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactattta 202  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29682164 tggatggttgagatcaaaattacttttgaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactattta 29682065  T
Q  203 aaatatacaacagaaattcaaat 225  Q
    |||||||||||| ||||| ||||    
T  29682064 aaatatacaacaaaaatttaaat 29682042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16122003 - 16122212
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| | || ||||||||||||||||||||||    
T  16122003 tgattttgatagaattgattttggttaaaagtgatttgagtgtaagttgatttgtgtttgaatacctttatgtataagtgattcttattaatttattttg 16122102  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatt 200  Q
    ||||||  ||||||||||||||||||||| ||||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||| |||||  ||    
T  16122103 tttggatagttgagatcaaaattgcttttgaaggtataattacaaaaa--ggtgtatttaaataatatatttacaattttt-gtttcaatttaaacgttt 16122199  T
Q  201 taaaatatacaac 213  Q
    |||||||||||||    
T  16122200 taaaatatacaac 16122212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 16548228 - 16548174
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  16548228 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 10826186 - 10826085
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||||||||||||||||||| | | ||||||||| ||||||||||   ||||  | || |||||||||| | || ||||||||||    
T  10826186 tttgagagaattgattttggttaaaagtgagttgaatttgaattgatttttgtttggatatacttatttaaaagtgattcttatgagttgattttgtttg 10826087  T
Q  105 ga 106  Q
    ||    
T  10826086 ga 10826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 1500040 - 1499984
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatg 72  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||| |||| ||||||    
T  1500040 tgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatg 1499984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16442352 - 16442416
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| |||| ||||||| |||| ||||||||||| ||| ||||||||| |||||||||||    
T  16442352 tgattttgagagaattgattttagttacaagtgagttgaatgtgaattgatttatgtttggatac 16442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 21254885 - 21255027
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgttt- 103  Q
    ||||| |||| ||| |||| ||||||||||||||| ||| ||||||||| |||||||||||  | |   | || |||||||||| ||||||| ||||||     
T  21254885 tttgagagaattgaatttgattaaaagtgagttgaatgt-aattgatttatgtttggatacaataacctaaaattgattcttatcaatttatgttgtttc 21254983  T
Q  104 ggacggttgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    ||  | |||| ||||||||||||||| || |||||||||||||||    
T  21254984 ggtagtttga-atcaaaattgcttttgaaagtataattaccaaaa 21255027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3605754 - 3605819
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacct 67  Q
    |||||||| ||||| |||||||| |||||||||||||||||| ||| |||||| |||||||| ||||    
T  3605754 tgattttg-tagaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggacacct 3605819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 17830004 - 17830058
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgttt 59  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||    
T  17830004 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 17830058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 1312445 - 1312546
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||||| || |||||||||||||||||||||||| ||  ||||||||| |||| |||||| || |   |||| |||||||||  |||| || |||||||    
T  1312445 tttgataaaattgattttggttaaaagtgagttgaatgcgaattgatttatgttcggatacattgacttagaattgattcttaaaaattaatgttgtttg 1312544  T
Q  105 ga 106  Q
    ||    
T  1312545 ga 1312546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 44992 - 45058
Alignment:
Q  81 attcttattaatttattttgtttggacggttgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||| |||| ||  ||||||||||||||    
T  44992 attcttattaatttattt-gtttggactgtttagaccaaaattgtttttgaatatataattaccaaaa 45058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 33899011 - 33899154
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||| |||||||||||||   | | ||||||||| |||||||||||  | ||| | || |||||||||| | || ||  ||||||    
T  33899011 tttgagagaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggatacactaatgtaaaagtgattcttatgagttaataatgtttg 33899110  T
Q  105 gacggttgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    || |||| | |||||||||| |||| || || |||| |||||||    
T  33899111 gatggtttaaatcaaaattgattttgaatgtgtaatgaccaaaa 33899154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 5584051 - 5584196
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    ||||||||| |||| ||||||||  |||||||||||| | ||| ||||||||| ||||||||||  |||||  |||| ||||| |||  |||| |  |||    
T  5584051 tgattttgacagaattgattttgactaaaagtgagtttaatgt-aattgatttatgtttggatatatttatatagaagtgatttttaccaattcaagttg 5584149  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaa 147  Q
    ||||||   || | |||||||| |||||| || ||| ||||||||||    
T  5584150 tttggataatttaaatcaaaatagcttttgaaagtagaattaccaaa 5584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 8551109 - 8551163
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    ||||| || |||||||||||||||||| ||| |||||| |||||||| |||||||    
T  8551109 tgattctgattaaaagtgagttgagtgaaaagtgatttatgtttggacaccttta 8551163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 29409257 - 29409399
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||| |||||||||||||   ||| ||||||||| |||||||||||  || |  | ||||||||||||| | || || |||||||    
T  29409257 tttgaaagaattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggatacagttttttaaaaatgattcttatgagttgatgttgtttg 29409356  T
Q  105 gacggttgagatcaaaattgcttttaaaggtataattaccaaa 147  Q
    ||  |||   |||||||||  |||| || ||||||| ||||||    
T  29409357 gatagtttgaatcaaaattaattttgaatgtataatgaccaaa 29409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6208065 - 6208128
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||  ||| |||||||| ||||||||||||||| ||| |||||| || |||||||||||    
T  6208065 tgattttgagtgaattgattttgattaaaagtgagttgaatgtgaattga-ttatgtttggatac 6208128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 30599906 - 30600128
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtt 102  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30599906 attttgatagaattgattttggttaaaagtgagttgagtgtcaattgatttgtgtttggatacctttatgcataaatgattcttattaatttattttgtt 30600005  T
Q  103 tggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactattta 202  Q
    |||| ||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30600006 tggatggttgagattaaaattgtttttgaaggtataattaccaaaaagggtgtatttaaacaatatatttataatttttggtttcaatctaaactattta 30600105  T
Q  203 aaatatacaacagaaattcaaat 225  Q
    |||||||||||||||||| ||||    
T  30600106 aaatatacaacagaaatttaaat 30600128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 3854008 - 3853856
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||| || ||| | || |||||||||| ||| ||| |||    
T  3854008 tgattttgatagaattgattttgattaaaagtgagttgaatgtaaattgatttatgtttggatacattcatgtaaaattgattcttatcaatctatgttg 3853909  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||  |||   ||||||||||||||| || || |||||| ||||| ||||    
T  3853908 tttggatagtttgaatcaaaattgcttttgaatgtgtaattatcaaaaagggt 3853856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 18511210 - 18511058
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    ||||||||||| || ||||||||||||||||||| || | ||| ||||||||| ||||||||||| |  ||| | ||||||||||||| || | || |||    
T  18511210 tgattttgatataattgattttggttaaaagtgatttaaatgttaattgatttatgtttggatacatcaatgtaaaaatgattcttataaagtgatgttg 18511111  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||   || | |||||||||| |||| || | ||||||||||||| ||||    
T  18511110 tttggataatttaaatcaaaattgattttgaatgcataattaccaaaatgggt 18511058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23359930 - 23359997
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  23359930 tgattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 23359997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 1945043 - 1945103
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  1945043 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 1945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 25747886 - 25748028
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||| ||||||||||||||| ||| ||||||||| |||||||||||  | |   | || |||||||||| ||||||| |||||||    
T  25747886 tttgagagaattgattttgattaaaagtgagttgaatgt-aattgatttatgtttggatacaataacctaaaattgattcttatcaatttatgttgtttg 25747984  T
Q  105 gacggttgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    |   |||   ||||||||||||||| || ||||||||| |||||    
T  25747985 ggtagtttgaatcaaaattgcttttgaaagtataattatcaaaa 25748028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 26806265 - 26806324
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||| |||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  26806265 agaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggataccttta 26806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 23377595 - 23377545
Alignment:
Q  18 attttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  23377595 attttggttaaaagtgagttgaatgtaagttgatttatgtttggatacctt 23377545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 34433310 - 34433370
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||| ||| ||||||||| |||||||||||    
T  34433310 tttgacagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 34433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27911514 - 27911451
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||||||| ||| ||||||||||||||||||   ||| ||||||||| ||||||||||    
T  27911514 tgattttgatagaattgagtttggttaaaagtgagtttgatgtgaattgatttatgtttggata 27911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 5916244 - 5916305
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| |||| |||||||||||||||||||||||| ||| |||||| || |||||||||||    
T  5916244 attttgagagaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggatac 5916305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 36312382 - 36312321
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| |||| |||||||||||||||||||||||| ||| |||||| || |||||||||||    
T  36312382 attttgagagaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggatac 36312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 12110967 - 12110918
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||| | |||| |||||| |||||||||||    
T  12110967 tgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 12110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 14531978 - 14532023
Alignment:
Q  25 ttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||    
T  14531978 ttaaaagtgagttgaatgaaaagtgatttgtgtttggataccttta 14532023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 16467179 - 16467042
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttggacggttgaga 115  Q
    ||||||||||||||||||||||   ||||||||||||| ||||||||||   | ||| | || ||||||||||   || || | |||||||  ||| |||    
T  16467179 tgattttggttaaaagtgagttagatgtaaattgatttatgtttggatatgataatgtaaaagtgattcttatgggttgatgtagtttggatagtttaga 16467080  T
Q  116 tcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||||  ||||  | ||||||||||||||| ||||    
T  16467079 tcaaaattaatttttgatgtataattaccaaaatgggt 16467042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 42089538 - 42089591
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  42089538 agaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggata 42089591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2213610 - 2213550
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  2213610 tttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 2213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2213751 - 2213691
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||   ||| ||||||||||| |||||||||    
T  2213751 tttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttgtctttggatac 2213691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 8170416 - 8170357
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  8170416 tttgagagaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggatac 8170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 9988505 - 9988565
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||| |||||||||||||||  ||| ||||||||| |||||||||||    
T  9988505 tttgagagaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttggatac 9988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 10918709 - 10918649
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    |||||||  ||| ||||||||| |||||||||||||| |||||| |||||| |||||||||    
T  10918709 attttgactgaattgattttggataaaagtgagttgaatgtaaagtgatttatgtttggat 10918649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 28127291 - 28127351
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  28127291 tttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 28127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 30007557 - 30007613
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttgg 61  Q
    ||||| |||| | |||||||||||||||||||||| ||| ||||||||| |||||||    
T  30007557 tttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttgg 30007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 38600447 - 38600507
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||   ||||||||||||| |||||| ||||    
T  38600447 tttgagagaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttgaatac 38600507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 41580714 - 41580774
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||   |||||||| |||| |||||||||||    
T  41580714 tttgagagaattgattttggttaaaagtgagtttgatgtaaattaatttatgtttggatac 41580774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 16518908 - 16518869
Alignment:
Q  26 taaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  16518908 taaaagtgagttgagggtaaaatgatttgtgtttggatac 16518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 31224784 - 31224725
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| |||| ||||||| |||||||||||||||  ||| ||||||||| ||||||||||    
T  31224784 tttgaaagaattgattttagttaaaagtgagttggatgtgaattgatttatgtttggata 31224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 11759804 - 11759853
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||| |||||||||||||||  |||||||| |||||||||| ||||    
T  11759804 tgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatac 11759853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 1763313 - 1763261
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||||||||||||| |||||||| | |||| |||||| ||||| ||||||||    
T  1763313 tgattttggttaaaattgagttgaatttaaagtgatttatgtttagatacctt 1763261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 2215355 - 2215296
Alignment:
Q  6 ttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| |||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  2215355 ttgagagaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 2215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 7296259 - 7296199
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||| ||||||   ||| ||||||||| |||||||||||    
T  7296259 tttgagagaattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggatac 7296199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28261398 - 28261338
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||  ||| ||||||||| | |||||||||    
T  28261398 tttgagagaattgattttgcttaaaagtgagttggatgtgaattgatttatatttggatac 28261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 42770413 - 42770465
Alignment:
Q  18 attttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||||| ||||||||||||||| || |||||||| | |||||||||| |||||    
T  42770413 attttgattaaaagtgagttgaatgaaaattgatctatgtttggatatcttta 42770465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26491040 - 26490816
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  26491040 tgattttggtagaattgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatatagaagtgattcttattaatttattttg 26490941  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatt 200  Q
    ||| ||  |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||    
T  26490940 tttagatagttgagataaaaattgcttttggaggtataattaccaaaaggggtgtatttaaacaatatatttacaattttttgtttcaatttaaacattt 26490841  T
Q  201 taaaatatacaacagaaattcaaat 225  Q
    |||||||||||||| ||||| ||||    
T  26490840 taaaatatacaacataaatttaaat 26490816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31246317 - 31246469
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| | ||| || |||||||||| |||| || |||    
T  31246317 tgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggataccttaaagcaaaagtgattcttataaattcatgttg 31246416  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||    |  ||||||||||| ||||||| | ||||||||||||| ||||    
T  31246417 tttggataacttggatcaaaattgattttaaatgcataattaccaaaatgggt 31246469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3619071 - 3619217
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||  ||| ||||| || | |||||||||||||||| |||||||||||||||||||||| || ||    || |||||||||| ||| ||| |||    
T  3619071 tgattttgaatgaattgattctgatcaaaagtgagttgagtg-aaattgatttgtgtttggatacattaatatgaaagtgattcttatcaatgtatgttg 3619169  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    ||||||  |||   |||||||||| ||||||| |||||||||||||||    
T  3619170 tttggatagtttgaatcaaaattgattttaaatgtataattaccaaaa 3619217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 23018199 - 23018099
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    |||||| ||| |||||||| | ||||||||||||||| |||||| |||| |||||||||||    ||||| || ||||||||||||||| ||||||||||    
T  23018199 tttgatcgaattgattttgatcaaaagtgagttgagtataaatttatttatgtttggatacacgaatgcaaaagtgattcttattaattgattttgtttg 23018100  T
Q  105 g 105  Q
    |    
T  23018099 g 23018099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 3467636 - 3467509
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||  |||||  | || |||||||||| |||| || ||| |||    
T  3467636 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttctgtttggatatatttatttaaaagtgattcttatgaattgatgttggttg 3467537  T
Q  105 gacggttgagatcaaaattgcttttaaa 132  Q
    ||  |||   |||||||||| |||||||    
T  3467536 gatagtttgaatcaaaattgattttaaa 3467509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19649278 - 19649226
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  19649278 tgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 19649226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22936799 - 22936859
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  22936799 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 22936859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 29970894 - 29970840
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    ||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||    
T  29970894 tgattttagttaaaagtgagttgagtttaaagtgatttatgtttggataccttta 29970840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 15206788 - 15206651
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttggacggttgaga 115  Q
    ||||||||| |||||||||||||| ||| ||||||||| ||||||||||| || |   |||| |||||||||  |||| || |||||||||  |||  |     
T  15206788 tgattttgggtaaaagtgagttgaatgtgaattgatttatgtttggatacattgacttagaagtgattcttaaaaattcatgttgtttggatagtttggc 15206689  T
Q  116 tcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
     |||||||| |||| || | ||||||||||||| ||||    
T  15206688 ccaaaattgattttgaatgcataattaccaaaaagggt 15206651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 43550983 - 43550934
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  43550983 tgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 43550934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 40742227 - 40742167
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  40742227 tttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 40742167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 10552926 - 10552969
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgttt 59  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  10552926 tgattttggttaaaagtgagttgaatgtaaattgatttatgttt 10552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28425474 - 28425538
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||| ||||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  28425474 tgattttgttagaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 28425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 41289064 - 41289124
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||  ||||||||||||||| ||| ||||||||| |||||||||||    
T  41289064 tttgagagaattgattttaattaaaagtgagttgattgtgaattgatttatgtttggatac 41289124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36779497 - 36779435
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||| ||||| |||||||| ||||||||||||||| |||||| | |||| ||||||||||    
T  36779497 tgattttg-tagaattgattttgattaaaagtgagttgaatgtaaagtaatttatgtttggata 36779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41891822 - 41891884
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||| ||||| ||||||| |||| ||||||||||||   |||||||||||||||||||||    
T  41891822 tgattttg-tagaattgattttagttagaagtgagttgagcaaaaattgatttgtgtttggata 41891884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 440201 - 440255
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| |||||||||||||| ||||||||  ||| ||||||||| |||||||||||    
T  440201 agaattgattttggttaaatgtgagttggatgtgaattgatttatgtttggatac 440255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22552742 - 22552804
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    ||||||| || ||| ||||||||| ||||||||||||||  | |||||||||| |||||||||    
T  22552742 tgattttaattgaattgattttggataaaagtgagttgatggaaaattgatttatgtttggat 22552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 33588818 - 33588760
Alignment:
Q  10 tagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||| |||||||| ||||||||||||| | |||||| | |||| ||||||||||||||    
T  33588818 tagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggatacctt 33588760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 39219826 - 39219765
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||||| ||||||| |||||||||||||| | | | || |||||| ||||||||||    
T  39219826 attttgatagaattgattttcgttaaaagtgagtttaatatgaagtgatttatgtttggata 39219765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 6399114 - 6399174
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||| ||||| ||||||||||||||||   ||| ||||||||| ||||| |||||    
T  6399114 tttgatagaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttcgatac 6399174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 30759311 - 30759359
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgattt 53  Q
    ||||| |||| |||||||||||||||||||||||  ||| |||||||||    
T  30759311 tttgagagaattgattttggttaaaagtgagttggatgtgaattgattt 30759359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35239605 - 35239541
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||||| || ||||||||||||||||||| |||| | |||| | |||| |||||| ||||    
T  35239605 tgattttgataaaattgattttggttaaaagtgaattgaatataaaataatttatgtttgaatac 35239541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42149112 - 42149049
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| ||||| || |||||||||||||||||||| ||||| || ||||||||| ||||||||||    
T  42149112 tgattctgatataattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggata 42149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 41625517 - 41625726
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttggacggttgaga 115  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||  |||||||    
T  41625517 tgattttgattaaaagtgacttgagtgtaaattaatttgtgtttggatacttttaagtagaagtgattcttattaatttattttgtttggatagttgaga 41625616  T
Q  116 tcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatttaaaatatacaacag 215  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||  ||||||||||||||||     
T  41625617 tcaaaattgcttttgaaggtataattaccaaaagaggtgtatttaaataatatatttacaattttttgtttcaatttaaacattttaaaatatacaacat 41625716  T
Q  216 aaattcaaat 225  Q
    ||||| ||||    
T  41625717 aaatttaaat 41625726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 42752180 - 42752332
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| | ||| |||| |||||||| |||| || |||    
T  42752180 tgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggataccttaaagcaaaaataattcttataaattcatgttg 42752279  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||    | |||||||||||| |||| || | ||||||| ||||| ||||    
T  42752280 tttggataacttagatcaaaattgattttgaatgcataattatcaaaatgggt 42752332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 39634154 - 39634306
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| |||||||||||||||||||||||| | | ||||||||| |||||||||| ||| |  || || |||||||||| ||||  | |||    
T  39634154 tgattttgttagaattgattttggttaaaagtgagttgaatatgaattgatttatgtttggataacttaaaacaaaagtgattcttataaattcttgttg 39634253  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||    |  ||||||||||| |||| || | ||||||||||||| ||||    
T  39634254 tttggataacttggatcaaaattgattttgaatgcataattaccaaaatgggt 39634306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 48459826 - 48459766
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  48459826 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 48459766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 38230178 - 38230124
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  38230178 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 38230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3375606 - 3375546
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| | ||||||||||||||||||||  |||| |||||||||||||||||||||    
T  3375606 tttgagagaattaattttggttaaaagtgagtttggtgtgaattgatttgtgtttggatac 3375546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 3622453 - 3622513
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  3622453 tttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 3622513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3750802 - 3750742
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  3750802 tttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 3750742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10371951 - 10372007
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttgg 61  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  10371951 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgg 10372007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 44967392 - 44967452
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  44967392 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgaatac 44967452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 4228652 - 4228598
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||||||| ||||||||||||||| || ||| |||||| ||||||||||||||||    
T  4228652 tgattttgattaaaagtgagttgaatgaaaagtgatttatgtttggataccttta 4228598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 20088974 - 20088920
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||||    
T  20088974 tgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttta 20088920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 37639546 - 37639489
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttgga 62  Q
    ||||| |||| ||||||||||||||||||| |||| ||| ||||||||| ||||||||    
T  37639546 tttgagagaattgattttggttaaaagtgaattgaatgtgaattgatttatgtttgga 37639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 34365975 - 34366035
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||| ||||||||| ||||| |||| ||||||||| |||||||||||    
T  34365975 tttgaaagaattgattttagttaaaagttagttgggtgtgaattgatttatgtttggatac 34366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 47022035 - 47021975
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||| ||||||  || ||||||||| |||||||||||    
T  47022035 tttgagagaattgattttggttaaaagtaagttgaaagtgaattgatttatgtttggatac 47021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1766545 - 1766478
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||||||||  || |||||||| |||||||||||||||   ||||||||||| | ||||||||||||    
T  1766545 tgattttgattaaattgattttgattaaaagtgagttgaacctaaattgatttatatttggatacctt 1766478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38494336 - 38494269
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| | ||| |||||||||||||||||||||||| ||| || || ||| ||||||| ||||||    
T  38494336 tgattttgtttgaattgattttggttaaaagtgagttgaatgtgaagtggtttatgtttggttacctt 38494269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 42740508 - 42740449
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| |||| ||||||||||||||||| |||||| ||| ||||||||| ||||| ||||    
T  42740508 tttgagagaattgattttggttaaaagtaagttgaatgttaattgatttatgtttagata 42740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16079522 - 16079460
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    |||||||  ||||| ||||||||||| |||||||||||| || ||| |||||| |||||||||    
T  16079522 tgattttagtagaattgattttggtttaaagtgagttgaatgaaaagtgatttatgtttggat 16079460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 37562680 - 37562626
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| ||||||| |||||||||||||||  ||| ||||||||| |||||||||||    
T  37562680 agaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttggatac 37562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41715777 - 41715715
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    ||||||| | |||| |||||||| |||||||||||||   ||||||||||||| |||||||||    
T  41715777 tgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 41715715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 24770915 - 24770952
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgattt 53  Q
    |||||||||||||||||||||||  |||||||||||||    
T  24770915 tgattttggttaaaagtgagttggatgtaaattgattt 24770952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 26975300 - 26975357
Alignment:
Q  15 ctgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatg 72  Q
    |||||||| |||| ||||||||||| |||||| |||||| |||||| |||| ||||||    
T  26975300 ctgattttagttataagtgagttgaatgtaaaatgatttatgtttgaatacgtttatg 26975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 33746494 - 33746449
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttgg 61  Q
    |||||||| ||||||||||||||| | ||||||||||| |||||||    
T  33746494 tgattttgattaaaagtgagttgaatataaattgatttttgtttgg 33746449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 36920171 - 36920236
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    ||||| |||| ||||||||||||||||||||||   | ||||||||||| |||||| |||| ||||    
T  36920171 tttgaaagaattgattttggttaaaagtgagttagatataaattgatttatgtttgaatacgttta 36920236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39391126 - 39391190
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgag-ttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||  ||||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  39391126 tgatttttttagaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 39391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 386485 - 386533
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||||||||||||||| || ||| ||| ||||||||| ||||||||||    
T  386485 tgattttggttaaaagttagctgaatgtgaattgatttatgtttggata 386533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3342906 - 3342846
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||| |||||||||||||||  | | ||||||||| |||||||||||    
T  3342906 tttgagagaattgattttagttaaaagtgagttggatatgaattgatttatgtttggatac 3342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 32187050 - 32186998
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    |||| |||||||| |||||||||||||   ||||||||||||| |||||||||    
T  32187050 agaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 32186998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45557520 - 45557456
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||  ||| ||||| ||  ||||||||||||||  ||||| ||||||||||||||||||    
T  45557520 tgattttgaatgaattgattctgactaaaagtgagttgaaggtaaagtgatttgtgtttggatac 45557456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26824220 - 26824444
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||||||| ||||||||||||||| | | |||||||||||||||||| | ||| ||||| |||||| |||| ||||||||||||||||||||||    
T  26824220 tgattttgatagaattgattttggttaaaaataaattgagtgtaaattgatttatatttagatacttttatgtagaagtgattcttattaatttattttg 26824319  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggtgtatttaaacaatatatttacaatttttggtttcaatctaaactatt 200  Q
    ||||||  | |||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||    
T  26824320 tttggatagatgagatcaaaattgcttttggagatataattactaaaaggggtgtatttaaacaatatatttacaattttttgtttcaatttaaacattt 26824419  T
Q  201 taaaatatacaacagaaattcaaat 225  Q
    |||||||||||||| ||||| ||||    
T  26824420 taaaatatacaacataaatttaaat 26824444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 54488689 - 54488537
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||| |||||| ||||||| | ||| || |||||||||| |||| ||||||    
T  54488689 tgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttgaataccttaaagcaaaagtgattcttataaattcattttg 54488590  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||    |  ||||||||||| ||||||| | ||||||||| ||| ||||    
T  54488589 tttggataacttggatcaaaattgattttaaatgcataattacccaaatgggt 54488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 38306095 - 38305943
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||  ||||||||| |||||||||||||| | ||| || |||||||||| |||| || |||    
T  38306095 tgattttgttagaattgatttttgttaaaagtgagttgaatgcgaattgatttatgtttggataccttaaagcaaaagtgattcttataaattcatgttg 38305996  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    ||||||    |  ||||||||||| |||| || | ||||||||||||| ||||    
T  38305995 tttggataacttggatcaaaattgattttgaatgcataattaccaaaatgggt 38305943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22699826 - 22699759
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  22699826 tgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22699759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22980704 - 22980771
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  22980704 tgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22980771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22994291 - 22994358
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  22994291 tgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22994358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48550429 - 48550492
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  48550429 tgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 48550492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 16566385 - 16566325
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  16566385 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16566325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36150688 - 36150625
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||| |||||| ||||||||||    
T  36150688 tgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttggata 36150625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42944900 - 42944963
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||| ||||    
T  42944900 tgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttagata 42944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46958107 - 46958040
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||| | |||| ||||||| ||||||    
T  46958107 tgattttgatagaattgattttggttaaaagtgagttgaacgtaaagtaatttatgtttggttacctt 46958040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13167605 - 13167545
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| | |||||||||    
T  13167605 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatatttggatac 13167545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 26651854 - 26651914
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  26651854 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttagatac 26651914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 51923020 - 51922960
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| | | ||||||||| |||||||||||    
T  51923020 tttgagagaattgattttggttaaaagtgagttgaatctgaattgatttatgtttggatac 51922960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 54487226 - 54487286
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||| |||||| | | ||||||||||||| ||||||||||||| |||||||||||    
T  54487226 tttgatagaattgatttcgatcaaaagtgagttgaatgtaaattgatttatgtttggatac 54487286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 6138637 - 6138727
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttgga 106  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||||||  ||||  | ||||||||| ||| | || || |||||||||    
T  6138637 tgattttggttaaaagtgagttggatgtgaattgatttatgtttggatacacttatttaaaaatgattcatatgagttgatgttgtttgga 6138727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4954053 - 4954118
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacc 66  Q
    ||||||||| |||| ||||||||||||||||||||||   ||| ||||||||| ||||||| ||||    
T  4954053 tgattttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttatgtttgggtacc 4954118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 46830086 - 46830135
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  46830086 tgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 46830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 49519810 - 49519709
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    ||||| |||| |||||||||||||||||||||||  ||| |||| |||| |||||||||||  ||    | ||||||||||||| |||| || |||||||    
T  49519810 tttgagagaattgattttggttaaaagtgagttggatgtgaatttatttatgtttggatacacttgcttaaaaatgattcttatgaattgatattgtttg 49519711  T
Q  105 ga 106  Q
    ||    
T  49519710 ga 49519709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20677133 - 20677069
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||| ||| |||||||| | |||||||| || |||||||| |||||| |||||||||||    
T  20677133 tgattttgattgaattgattttgatcaaaagtgaatttagtgtaaagtgatttatgtttggatac 20677069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 28947766 - 28947818
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||    
T  28947766 tgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttacctt 28947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 29149313 - 29149373
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  29149313 tttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 29149373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 39187814 - 39187754
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||| | |||| ||| ||||||||| |||||||||||    
T  39187814 tttgagagaattgattttggttaaaagtaatttgaatgtgaattgatttatgtttggatac 39187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 39636865 - 39636805
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||  ||| ||||||||| |||||||||||    
T  39636865 tttgagagaattgattttgattaaaagtgagttggatgtgaattgatttatgtttggatac 39636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 40286358 - 40286302
Alignment:
Q  9 atagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||| |||||||| |||||| ||||||||||| ||| |||||| |||||||||||    
T  40286358 atagaattgattttgattaaaattgagttgagtgaaaaatgatttatgtttggatac 40286302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 43772129 - 43772189
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||| ||||| |||||||||||    
T  43772129 tttgagagaattgattttggttaaaagtgagttggatgtgaatcgatttatgtttggatac 43772189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 55638761 - 55638821
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||| |||||||||||||| | ||||||||||||| ||||| |||||    
T  55638761 tttgagagaattgatttttgttaaaagtgagttaaatgtaaattgatttatgtttagatac 55638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 14564152 - 14564215
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||| |||| |||||||||||||| ||||||||  | | ||||||||| ||||||||||||||    
T  14564152 tttgagagaattgattttggttaaatgtgagttggatatgaattgatttatgtttggatacctt 14564215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 33574258 - 33574203
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttg 60  Q
    ||||| |||| | |||||||||||||||||||||| ||| ||||||||| ||||||    
T  33574258 tttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttg 33574203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33843866 - 33843803
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||| ||| ||||| ||| |||||||||||||  |||||| |||||| ||||||||||    
T  33843866 tgattttgattgaattgattctggctaaaagtgagttggatgtaaagtgatttatgtttggata 33843803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 2171922 - 2171880
Alignment:
Q  23 ggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||| ||||||| |||||||||||||||| |||||||||||    
T  2171922 ggttaatagtgagtcgagtgtaaattgatttatgtttggatac 2171880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5025612 - 5025547
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacct 67  Q
    |||||||| ||||| ||||||| |||| ||||||||||||   |||||||||| |||||||||||||    
T  5025612 tgattttg-tagaattgattttagttagaagtgagttgagcaaaaattgatttatgtttggatacct 5025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 19592243 - 19592297
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||| |||||||||||||||||||||||   || ||||||||| |||||||||||    
T  19592243 agaattgattttggttaaaagtgagttggaagtgaattgatttatgtttggatac 19592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48550301 - 48550239
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggat 63  Q
    ||||||| | |||| |||||||| |||||||||||||   ||||||||||||| |||||||||    
T  48550301 tgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttggat 48550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 14597638 - 14597695
Alignment:
Q  13 aactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||| |||||| ||||||||||||||| || ||| |||||| |||||||||| |||||    
T  14597638 aactaattttgattaaaagtgagttgaatgaaaagtgatttatgtttggatatcttta 14597695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 56241847 - 56241984
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttggacggt 110  Q
    |||| |||||||| |||||||||||||   | | ||||||||| ||||||||||| || ||| | || |||||||||| | || ||  ||||| || | |    
T  56241847 agaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggatacattaatgtaaaagtgattcttatgagttgataatgtttagatgat 56241946  T
Q  111 tgagatcaaaattgcttttaaaggtataattaccaaaa 148  Q
    | | |||||||||| |||| || ||||||| |||||||    
T  56241947 ttaaatcaaaattgattttgaatgtataatgaccaaaa 56241984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 14072582 - 14072523
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| |||||||||||||||  ||||||||| || |||||||||||    
T  14072582 tttgagagaattgattttgtttaaaagtgagttgaaggtaaattga-ttatgtttggatac 14072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 15619694 - 15619634
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||| ||||||||||||  ||| ||||||| | |||||||||||    
T  15619694 tttgagagaattgattttggtaaaaagtgagttggatgtgaattgatgtatgtttggatac 15619634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16493011 - 16492947
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| | || ||| |||| ||||||||||||||| ||| |||| |||| |||||||||||    
T  16493011 tgattttgaaataattgagtttgattaaaagtgagttgaatgtgaatttatttatgtttggatac 16492947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 25312795 - 25312735
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| |||||||||||||   ||| ||||||||| |||||||||||    
T  25312795 tttgagagaattgattttgattaaaagtgagttagatgtgaattgatttttgtttggatac 25312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 49136602 - 49136542
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||| ||||||||||||||||   ||| ||||||||| |||||||||||    
T  49136602 tttgagagaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttggatac 49136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 54150606 - 54150546
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| |||||||||||||   ||| ||||||||| |||||||||||    
T  54150606 tttgagagaattgattttgattaaaagtgagttagatgtgaattgatttttgtttggatac 54150546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 54153113 - 54153077
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatt 52  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  54153113 tgattttggttaaaagtgagttgaatgtgaattgatt 54153077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 49526671 - 49526823
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttg 100  Q
    |||||||||||||| |||||||| |||||||||| |||| ||||||||||||| ||||||||||| || ||| | || |||||||||| ||||||| |||    
T  49526671 tgattttgatagaattgattttgattaaaagtgaattgattgtaaattgatttatgtttggatacattcatgtaaaattgattcttatcaatttatgttg 49526770  T
Q  101 tttggacggttgagatcaaaattgcttttaaaggtataattaccaaaaggggt 153  Q
    |||  |  ||  | ||||||||||||||| || || ||||||| |||| ||||    
T  49526771 tttaaatagtctaaatcaaaattgcttttgaatgtgtaattactaaaaagggt 49526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 7012737 - 7012672
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||| ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  7012737 attttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 7012672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 15511382 - 15511442
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  15511382 tttgaaagaattgattttggttaaaagtgagttgggtgtgaattgatttatgtttggatac 15511442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 23496412 - 23496352
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  23496412 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 23496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31084306 - 31084242
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||| ||||||||| |||||||||||    
T  31084306 tgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 31084242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 50664853 - 50664793
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  50664853 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 50664793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 23918939 - 23918872
Alignment:
Q  3 attttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||||| ||||| | |||||||||||||||||||||| |||||| |||||| ||||||| ||||||||    
T  23918939 attttggtagaattaattttggttaaaagtgagttgaatgtaaagtgatttatgtttggttaccttta 23918872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10852715 - 10852781
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacct 67  Q
    |||||||| || || |||||||||||||||||||||||| |||||| |||||| ||||||| |||||    
T  10852715 tgattttggtataattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggctacct 10852781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 52931589 - 52931638
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  52931589 tgattttagttaaaagtgagtttagtgtaaattgatttatgtttggatac 52931638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 34561203 - 34561143
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| || |||||||||||||||||||||||| ||  ||||||||| |||||||||||    
T  34561203 tttgataaaattgattttggttaaaagtgagttgaatgcgaattgatttatgtttggatac 34561143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 10853273 - 10853332
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| |||| |||||||||||||||||||||| | | ||||||||||| ||||||||||    
T  10853273 tttgagagaattgattttggttaaaagtgagtttaatataaattgatttatgtttggata 10853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14651104 - 14651166
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    |||||||||||||| |||||||| ||||||||||||||| | | ||||||||||||||| ||||    
T  14651104 tgattttgatagaattgattttgattaaaagtgagttgaatat-aattgatttgtgttttgata 14651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 19877512 - 19877453
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| |||| |||||||||||||||||||||||  ||||||||||||| ||||| ||||    
T  19877512 tttgaaagaattgattttggttaaaagtgagttggatgtaaattgatttatgtttagata 19877453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 38340900 - 38340841
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||| |||| |||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  38340900 tttgaaagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 38340841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 3348327 - 3348278
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||| ||||||||||  ||||||||||||| |||||||||||    
T  3348327 tgattttggttagaagtgagttggatgtaaattgatttatgtttggatac 3348278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 25848114 - 25847986
Alignment:
Q  18 attttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttggacggttgagatc 117  Q
    |||||||| ||||||||||| | | | ||||||||| |||||||||||||| |   | ||||||||||||| | ||| | |||||||||  ||||| ||     
T  25848114 attttggtaaaaagtgagtttaatatgaattgatttatgtttggataccttcacttaaaaatgattcttatgagtttgtgttgtttggatagttga-ata 25848016  T
Q  118 aaaattgcttttaaaggtataattaccaaa 147  Q
    ||||||| ||||||| || |||| ||||||    
T  25848015 aaaattgattttaaatgtgtaatgaccaaa 25847986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44225663 - 44225599
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacc 66  Q
    |||||||| ||||| ||||||| |||||||||||||| | |||||| |||||| ||||||||||||    
T  44225663 tgattttg-tagaattgattttcgttaaaagtgagtttaatgtaaagtgatttatgtttggatacc 44225599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 53179932 - 53179883
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||||||||||||||||   ||||||||||||| |||||||||||    
T  53179932 tgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatac 53179883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 10334233 - 10334173
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||| |||||| | | ||||||||| |||||||||||    
T  10334233 tttgagagaattgattttggttaaaagtcagttgaatatgaattgatttatgtttggatac 10334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21225085 - 21225025
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||   ||||||||||| | |||||||||||    
T  21225085 tttgagagaattgattttggttaaaagtgagtttgatgtaaattgatatatgtttggatac 21225025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 26519759 - 26519699
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| | ||||||||||||| ||| ||||||||| |||||||||||    
T  26519759 tttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 26519699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 38172313 - 38172373
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||| |  ||| ||||||||| |||||||||||    
T  38172313 tttgagagaattgattttggttaaaagtgagtgggatgtgaattgatttatgtttggatac 38172373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 42644346 - 42644298
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||||||    
T  42644346 tgattttagttaaaagtgagttgaatgtaaagtgatttatgtttggata 42644298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 48189448 - 48189507
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  48189448 tttgagagaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggatac 48189507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 53568016 - 53567960
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatg 72  Q
    |||||||| ||||||||||||||| || ||| | |||| ||||||||||||||||||    
T  53568016 tgattttgattaaaagtgagttgaatgaaaagtaatttatgtttggatacctttatg 53567960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25181308 - 25181242
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||| ||||| |||||||| ||||||||||||| | |||||| | |||| ||||||||||||||    
T  25181308 tgattttg-tagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggatacctt 25181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29252127 - 29252186
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttg 60  Q
    |||||||||| ||| |||||||| | ||||||||||| | ||||||||||||| ||||||    
T  29252127 tgattttgattgaattgattttgatcaaaagtgagttaattgtaaattgatttatgtttg 29252186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41459314 - 41459247
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||||||||| ||| ||| ||||||||||||||| ||||   ||||||||||| |||||| |||||||    
T  41459314 tgattttgattgaattgactttggttaaaagtgatttgaagataaattgatttatgtttgaatacctt 41459247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 30811538 - 30811638
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac-ctttatgcagaaatgattcttattaatttattttgttt 103  Q
    ||||| |||| |||||||| ||||||||||||||| ||| |||||| || ||||||||||| |||||  ||||| |||||||||| | || || ||||||    
T  30811538 tttgagagaattgattttgattaaaagtgagttgaatgtgaattga-ttatgtttggatacacttta-acagaagtgattcttatgacttgatattgttt 30811635  T
Q  104 gga 106  Q
    |||    
T  30811636 gga 30811638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 35425428 - 35425328
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac-ctttatgcagaaatgattcttattaatttattttgttt 103  Q
    ||||| |||| |||||||| ||||||||||||||| ||| |||||| || ||||||||||| |||||  ||||| |||||||||| | || || ||||||    
T  35425428 tttgagagaattgattttgattaaaagtgagttgaatgtgaattga-ttatgtttggatacacttta-acagaagtgattcttatgagttgatattgttt 35425331  T
Q  104 gga 106  Q
    |||    
T  35425330 gga 35425328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 4984665 - 4984616
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||||||||||||||||   ||| ||||||||| |||||||||||    
T  4984665 tgattttggttaaaagtgagttagatgtgaattgatttatgtttggatac 4984616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 52736855 - 52736794
Alignment:
Q  9 atagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||||| |||||||| ||||||||||| | | || ||| |||||||||||||||||| ||||    
T  52736855 atagaagtgattttgattaaaagtgaggttaatgaaaagtgatttgtgtttggatactttta 52736794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52966811 - 52966876
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacc 66  Q
    ||||||||| |||| ||||||||||||||||||| ||   ||| ||||||||| ||||||| ||||    
T  52966811 tgattttgagagaattgattttggttaaaagtgactttgatgtgaattgatttatgtttgggtacc 52966876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 8424736 - 8424795
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| ||||||||||||||||||||||||  || |||||| || |||||||||||    
T  8424736 tttgagagaattgattttggttaaaagtgagttgaacgtgaattga-ttatgtttggatac 8424795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23207070 - 23207134
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||| || || ||||||||||||||| ||||||   ||| ||||||||| |||||||||||    
T  23207070 tgattttgttataattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggatac 23207134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30809947 - 30809999
Alignment:
Q  1 tgattttgatagaactgattttggttaaaagtgagttgagtgtaaattgattt 53  Q
    ||||||||||| || ||| |||||||||||||||||| | ||| |||||||||    
T  30809947 tgattttgataaaattgagtttggttaaaagtgagttaaatgtgaattgattt 30809999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 301620 - 301520
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttattttgtttg 104  Q
    |||||| ||| |||||||||| ||||||||||||||| |||||| |||| ||||||||| |  | ||||| ||||||||||| |||||| ||||||||||    
T  301620 tttgatcgaattgattttggtcaaaagtgagttgagtataaatttatttatgtttggattcagtaatgcaaaaatgattcttgttaattgattttgtttg 301521  T
Q  105 g 105  Q
    |    
T  301520 g 301520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 15274 - 15323
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    |||||||||||||||||||||||| | |||| |||||| |||||||||||    
T  15274 tgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 15323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 199381 - 199438
Alignment:
Q  11 agaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    |||| ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||    
T  199381 agaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttacctt 199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 8544 - 8484
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||| || ||||||||||||||||||||||   ||| ||||||||| |||||||||||    
T  8544 tttgatataattgattttggttaaaagtgagtttgatgtgaattgatttatgtttggatac 8484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 118416 - 118476
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||||||||  |||||| ||||||||||||||   ||||||||||||| |||||||||||    
T  118416 tttgatagaatagatttttgttaaaagtgagtttgatgtaaattgatttatgtttggatac 118476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 29129 - 29188
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 65  Q
    ||||| |||| |||||||||||||||||||||||| ||| |||||| || |||||||||||    
T  29129 tttgaaagaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttggatac 29188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 253223 - 253160
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatacctt 68  Q
    ||||| |||| |||||||||||||| ||||||||  | | ||||||||| ||||||||||||||    
T  253223 tttgagagaattgattttggttaaatgtgagttggatatgaattgatttatgtttggatacctt 253160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 219740 - 219683
Alignment:
Q  13 aactgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggataccttta 70  Q
    |||| |||||| ||||||||||||||| || ||| |||||| |||||||||| |||||    
T  219740 aactaattttgattaaaagtgagttgaatgaaaagtgatttatgtttggatatcttta 219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 5836 - 5882
Alignment:
Q  5 tttgatagaactgattttggttaaaagtgagttgagtgtaaattgat 51  Q
    ||||| |||| |||||||||||||||||||||||| ||| |||||||    
T  5836 tttgagagaattgattttggttaaaagtgagttgaatgtgaattgat 5882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 65584 - 65536
Alignment:
Q  16 tgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggata 64  Q
    ||||||||||||||| |||||| | |||||| |||||| ||||||||||    
T  65584 tgattttggttaaaaatgagtttaatgtaaagtgatttatgtttggata 65536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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