View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15292_low_1 (Length: 364)
Name: NF15292_low_1
Description: NF15292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15292_low_1 |
 |  |
|
| [»] scaffold0121 (1 HSPs) |
 |  |  |
|
| [»] scaffold0477 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 25471431 - 25471781
Alignment:
| Q |
1 |
ctattctcatctattataagttataagcatcttcaattcttctatagactgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25471431 |
ctattctcatctattataagttataagcatcttcaattcttctatggactgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaac |
25471530 |
T |
 |
| Q |
101 |
tattgtctttggcttttgttaatagtcattgcaaatgaaacaactatcagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25471531 |
tattgtctttggcttttgttaatagtcattgcaaatgaaacaactatcagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggt |
25471630 |
T |
 |
| Q |
201 |
gtaagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatcagtc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25471631 |
gtaagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatcagtc |
25471730 |
T |
 |
| Q |
301 |
ttgtaccgttgaataatcctactctttgatctatattccttaacatctctg |
351 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25471731 |
ttgtaccgttgaataatcctactctttgatctatattccttaacatctctg |
25471781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 345
Target Start/End: Complemental strand, 9270829 - 9270540
Alignment:
| Q |
52 |
accatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactatcaga |
151 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||| | |||||||||||||| ||||| ||||||||||||||| | |
|
|
| T |
9270829 |
accatgtgaaaacacaacatttgacaaatatatcccaacattctttaaagattgttactaacttttgttaatagttattgcgaatgaaacaactatcgaa |
9270730 |
T |
 |
| Q |
152 |
aattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttctacat |
251 |
Q |
| |
|
||||||||| ||| || | | |||| | | | || || ||||||||||||||||| |||||||||||| |||| || |||||||||||| | || |
|
|
| T |
9270729 |
aattgtctccattaaaatt----tgaaaggagtattgacgtcggaaggtgtaagagataatcttggtataaaatctttctcacctatattactttcagat |
9270634 |
T |
 |
| Q |
252 |
atgaccttcccttcaagaacatacttacccattctagttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
|||||||| || ||||| ||| | ||| |||||| ||||||| ||||||||||| |||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
9270633 |
atgacctttccatcaagcacaaatatacacattcttgttattagtagtcttgtaccattgaataaccctgatctgtgatctatattccttaaca |
9270540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 26168749 - 26168712
Alignment:
| Q |
116 |
ttgttaatagtcattgcaaatgaaacaactatcagaaa |
153 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
26168749 |
ttgttaatagtcattgcaaatgagacaaatatcagaaa |
26168712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 50 - 345
Target Start/End: Complemental strand, 25547 - 25256
Alignment:
| Q |
50 |
tgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactatca |
149 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||| |||| ||| | || | |||| ||| |||||||||||||||||||| || |||||||||||| |
|
|
| T |
25547 |
tgaccatgtgaaaacacatgacttggaaaatatatctcaactttcttcaaagactgtccttgacttttgttaatagtcattgcgaaagaaacaactatcg |
25448 |
T |
 |
| Q |
150 |
gaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttctac |
249 |
Q |
| |
|
||| |||||| ||||| | |||||| ||| | ||||| ||||| ||||||||||| ||||||||||||| ||| | || |||||| |||| | |
|
|
| T |
25447 |
aaaactgtctccgttgaaatt----taaaaggtatcatgacatcagaaggagtaagagataatcttggtataaaaaatttcttgcatatattgcttcgaa |
25352 |
T |
 |
| Q |
250 |
atatgaccttcccttcaagaacatacttacccattctagttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
||||||| || |||||||| ||| | |||||||||||||| || || |||||||| || ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
25351 |
atatgacatttccttcaagcacaaatttacccattctagtaatgattagtcttgtgccattgcataatcctgatctttgatctatattccttaaca |
25256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 345
Target Start/End: Complemental strand, 47507779 - 47507487
Alignment:
| Q |
49 |
ctgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactatc |
148 |
Q |
| |
|
|||||| |||||||||| | | |||||| |||||| |||||||| |||| |||||| ||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
47507779 |
ctgaccgtgtgaaaacataggacttggcagatatatatcaacattctttaaagattgtccttgactcttgttaatagtcattgcgaatgaaacaactatc |
47507680 |
T |
 |
| Q |
149 |
agaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttcta |
248 |
Q |
| |
|
||||| |||||| ||||| | | |||| | |||| || || ||| ||| ||| ||||| ||||||||||||||||| |||||||||||||||| | |
|
|
| T |
47507679 |
agaaactgtctccgttgaaatt----tgaaaggagtcctgacgtcggaacgtgcaagggataatcttggtataaaaactttctcgcctatattacttcga |
47507584 |
T |
 |
| Q |
249 |
catatgaccttcccttcaagaacatacttacccattctagttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
|||||| || ||||||| ||| | |||||||| | ||||||| ||||||||||| ||| |||| | | ||||||||||||||||||||||| |
|
|
| T |
47507583 |
gatatgagatttccttcaaacacaaatttacccatcatgattattattagtcttgtaccattgcataagcgtgatctttgatctatattccttaaca |
47507487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 50938752 - 50938821
Alignment:
| Q |
203 |
aagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaaca |
272 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| || ||||||| | |||| ||||| ||||||||||| |
|
|
| T |
50938752 |
aagagataacctgggtatgaaaactttttcgccgatgttacttccatatataacctttgcttcaagaaca |
50938821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 56476111 - 56476168
Alignment:
| Q |
189 |
acatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttc |
246 |
Q |
| |
|
||||||||||| | |||||||||||||||||||| ||||| || || |||||||||| |
|
|
| T |
56476111 |
acatctgaaggagatagagataaccttggtataaacactttgtcaccgatattacttc |
56476168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 30176437 - 30176469
Alignment:
| Q |
102 |
attgtctttggcttttgttaatagtcattgcaa |
134 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
30176437 |
attgtctttgacttttgttaatagtcattgcaa |
30176469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 345
Target Start/End: Original strand, 69 - 363
Alignment:
| Q |
48 |
actgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactat |
147 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| ||| | | | |||| ||| ||||||||| |||||||||| | ||||||||||| |
|
|
| T |
69 |
actgaccatgtgaaaacacaaaatttggcaaatatatcccaactttcttcagagactgtccttgacttttgttagtagtcattgcgagagaaacaactat |
168 |
T |
 |
| Q |
148 |
cagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttct |
247 |
Q |
| |
|
| ||| |||||| ||||| | | ||| ||| | ||||| |||| ||||||||||| |||| ||||||||| || || |||||||| |||| |
|
|
| T |
169 |
cggaatatgtctccgttgaaatttgct---aaggtatcttgacatcagaagaagtaagagataatcttgatataaaaacgttctcacctatattgcttcc |
265 |
T |
 |
| Q |
248 |
acatatgaccttcccttcaagaacatacttacccattctagttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
| |||||||||| |||||||| ||| | ||||||||| | |||| || |||||||| | ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
266 |
agatatgacctttccttcaagcacaaatttacccattatggttacgattagtcttgtgtcattgcataatcctgatctttgatctatattccttaaca |
363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 345
Target Start/End: Original strand, 4649052 - 4649346
Alignment:
| Q |
48 |
actgaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactat |
147 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| ||| | | | |||| ||| ||||||||| |||||||||| | ||||||||||| |
|
|
| T |
4649052 |
actgaccatgtgaaaacacaaaatttggcaaatatatcccaactttcttcagagactgtccttgacttttgttagtagtcattgcgagagaaacaactat |
4649151 |
T |
 |
| Q |
148 |
cagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttct |
247 |
Q |
| |
|
| ||| |||||| ||||| | | ||| ||| | ||||| |||| ||||||||||| |||| ||||||||| || || |||||||| |||| |
|
|
| T |
4649152 |
cggaatatgtctccgttgaaatttgct---aaggtatcttgacatcagaagaagtaagagataatcttgatataaaaacgttctcacctatattgcttcc |
4649248 |
T |
 |
| Q |
248 |
acatatgaccttcccttcaagaacatacttacccattctagttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
| |||||||||| |||||||| ||| | ||||||||| | |||| || |||||||| | ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
4649249 |
agatatgacctttccttcaagcacaaatttacccattatggttacgattagtcttgtgtcattgcataatcctgatctttgatctatattccttaaca |
4649346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 34417210 - 34417333
Alignment:
| Q |
198 |
ggtgtaagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatca |
297 |
Q |
| |
|
|||| |||||||||||| ||||| || ||||||||||| |||||||||| | | || ||| | |||||||||||| | || |||||||||||||| || | |
|
|
| T |
34417210 |
ggtgaaagagataacctgggtatgaacactttttcgccaatattacttccagaaataacccttccttcaagaacaaattttcccattctagttatgatta |
34417309 |
T |
 |
| Q |
298 |
gtcttgtaccgttgaataatccta |
321 |
Q |
| |
|
||||| |||||| ||||||||| |
|
|
| T |
34417310 |
accttgttccgttgcataatccta |
34417333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 343
Target Start/End: Complemental strand, 5337855 - 5337619
Alignment:
| Q |
104 |
tgtctttggcttttgttaatagtcattgcaaatgaaacaactatcagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgta |
203 |
Q |
| |
|
|||| ||| |||||||||||||||||||| || |||||||||||| |||| |||||| ||||| | | |||| ||| | ||||| ||||| ||| |
|
|
| T |
5337855 |
tgtccttgacttttgttaatagtcattgcgaaagaaacaactatcggaaactgtctccgttgaaatt----tgaaaggtatcatgacatcagaaggagta |
5337760 |
T |
 |
| Q |
204 |
agagataaccttggtataaaaactttt-tcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatcagtctt |
302 |
Q |
| |
|
|||||||| ||| ||||||||| ||| | || |||||| |||| | |||||||||| |||||||| | | | ||||| ||||||||||| || |||||| |
|
|
| T |
5337759 |
agagataatcttagtataaaaaaatttcttgcatatattgcttcgaaatatgacctttccttcaagcataaatttaccaattctagttatgattagtctt |
5337660 |
T |
 |
| Q |
303 |
gtaccgttgaataatcctactctttgatctatattccttaa |
343 |
Q |
| |
|
|| || ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
5337659 |
gtgccattgcataatcctgatctttgatctatattccttaa |
5337619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 24194695 - 24194599
Alignment:
| Q |
51 |
gaccatgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaacaactat |
147 |
Q |
| |
|
||||||||||||||||| | |||| |||||||| ||||| | ||| |||||| ||| |||||||||||||||||||| || ||||||||||| |
|
|
| T |
24194695 |
gaccatgtgaaaacacaggacttggtaaatatatcccaactatttttagagattgtcattgacttttgttaatagtcattgcgaaagaaacaactat |
24194599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 345
Target Start/End: Original strand, 7538 - 7828
Alignment:
| Q |
56 |
tgtgaaaacacaacatttggcaaatatatgccaacattcgttaactattgtctttggcttttgttaatagtcattgcaaatgaaa-caactatcagaaat |
154 |
Q |
| |
|
|||||||||||| | |||||| |||||| |||| ||| |||| ||||||||| ||||||||||||||||||| ||||||| | |||||||||| |
|
|
| T |
7538 |
tgtgaaaacacaggacttggcagatatatcccaaagttctttaaagattgtctttaacttttgttaatagtcattgtgaatgaaaacggctatcagaaac |
7637 |
T |
 |
| Q |
155 |
tgtctct-attgaattaaacataaaagaaatcctaacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttctacatat |
253 |
Q |
| |
|
|||||| |||||| | | |||| |||||| | || ||||||| ||||||||| ||| ||||||||||||| |||||||||||||||| | |||| |
|
|
| T |
7638 |
tgtctcccattgaaatt----tgaaaggaatcctgatgtcggaaggtgcaagagataatcttagtataaaaactttctcgcctatattacttccagatat |
7733 |
T |
 |
| Q |
254 |
gaccttcccttcaagaacatacttacccattctag---ttattatcagtcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
| | || |||||||| ||| | |||| ||| || | ||||||| ||||||||||| ||| |||| ||| | ||||||||||||||||||||| |
|
|
| T |
7734 |
ggcatttccttcaagcacaaatttactcatcctggttattattattagtcttgtaccattgcataagccttatatttgatctatattccttaaca |
7828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 345
Target Start/End: Original strand, 43731564 - 43731805
Alignment:
| Q |
104 |
tgtctttggcttttgttaatagtcattgcaaatgaaacaactatcagaaattgtctctattgaattaaacataaaagaaatcctaacatctgaaggtgta |
203 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| |||||| ||||| ||| ||||||| ||||| | | |||| ||| | ||||| ||||| ||| |
|
|
| T |
43731564 |
tgtccttgacttttgttaatagtcattgcaaaagaaacagctatcggaacttgtctccgttgaaatt----tgaaaggtatcatgacatcagaaggagta |
43731659 |
T |
 |
| Q |
204 |
agagataaccttggtataaaaact-----ttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatcag |
298 |
Q |
| |
|
|||||||| ||||||||||||| || | || |||||| |||| | |||||||||| |||||||| ||| | ||| ||||||||||||| || || |
|
|
| T |
43731660 |
agagataatcttggtataaaaaaaaaaaattcttgcatatattgcttcga-atatgacctttccttcaagcacaaatttatccattctagttatgattag |
43731758 |
T |
 |
| Q |
299 |
tcttgtaccgttgaataatcctactctttgatctatattccttaaca |
345 |
Q |
| |
|
|||||| | ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
43731759 |
tcttgtgtcattgcataatcctgatctttgatctatattccttaaca |
43731805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 32812935 - 32813053
Alignment:
| Q |
203 |
aagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattctagttattatcagtctt |
302 |
Q |
| |
|
|||||||||||| ||||||||||||| || || | |||||||| | |||| || || |||||||| ||| |||| ||||| |||||||| || | |||| |
|
|
| T |
32812935 |
aagagataacctgagtataaaaactttctcaccaacattacttccaaatatcacttttccttcaagcacaaactttcccatcctagttatgattaatctt |
32813034 |
T |
 |
| Q |
303 |
gtaccgttgaataatccta |
321 |
Q |
| |
|
|| || ||| ||||||||| |
|
|
| T |
32813035 |
gttccattgcataatccta |
32813053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 26701306 - 26701410
Alignment:
| Q |
187 |
taacatctgaaggtgtaagagataaccttggtataaaaactttttcgcctatattacttctacatatgaccttcccttcaagaacatacttacccattct |
286 |
Q |
| |
|
||||||| || |||| |||||||||||| ||||| |||||||||||||| || ||||||| | ||| ||||| |||||| | ||| | || |||||||| |
|
|
| T |
26701306 |
taacatcagatggtgaaagagataacctgggtatgaaaactttttcgccaatgttacttcgagatacaacctttccttcatgtacaaatttccccattct |
26701405 |
T |
 |
| Q |
287 |
agtta |
291 |
Q |
| |
|
|||| |
|
|
| T |
26701406 |
ggtta |
26701410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 3906944 - 3906984
Alignment:
| Q |
119 |
ttaatagtcattgcaaatgaaacaactatcagaaattgtct |
159 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3906944 |
ttaatagtcattgcaaatgaaacaactaaatgaaattgtct |
3906984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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