View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15295_high_8 (Length: 211)
Name: NF15295_high_8
Description: NF15295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15295_high_8 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 9588644 - 9588809
Alignment:
| Q |
31 |
gaatgcatgcaagaacaaatccctgtaaacaagtaaacggttttcatgcaaactgatttacnnnnnnntacaacaatgaagatgtcttcaaagtgcaatg |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9588644 |
gaatgcatgcaagaacaaatccctgtaaacaagtaaacggttttcatgcaaactgatttacaaaaaaatacaacaatgaagatgtcttcaaagtgcaatg |
9588743 |
T |
|
| Q |
131 |
agtccaaaattgtcttttctgtatgtttggacatgagataacctcacaaagtccaaccacctaaat |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9588744 |
agtccaaaattgtcttttctgtatgtttggacatgagataacctcacaaagtccaaccacctaaat |
9588809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University