View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15295_low_6 (Length: 270)
Name: NF15295_low_6
Description: NF15295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15295_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 34057928 - 34057695
Alignment:
| Q |
28 |
atgaaactatgttatatagcatcaacacatgtaaactaaattctaattaatatacttgcatttaataattgttctgaacttgatcaaagcccatcttaat |
127 |
Q |
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| T |
34057928 |
atgaaactatgttatataccatcaacacatgtaaactaaattctaattaatatacttgcatttaataattgttctgaacttgatcaaagcccatattaat |
34057829 |
T |
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| Q |
128 |
tagacctctgctctagaagtaccaacatccatgtgatttcttccagcaacaggacaattacatcaaatgcaaaaaagactataatgtaagttgatttcca |
227 |
Q |
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| T |
34057828 |
tagacctctgctctagaagtaccaacatccatgtgatttcttccagcaacaggacaattacatcaaatgcaaaaaagactataatgtaagttgatttcca |
34057729 |
T |
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| Q |
228 |
tttttcttcatgattcaacatagtaaatcctatg |
261 |
Q |
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| T |
34057728 |
tttttcttcatgattcaacatagtaaatcctatg |
34057695 |
T |
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