View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15296_high_40 (Length: 280)
Name: NF15296_high_40
Description: NF15296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15296_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 14091489 - 14091745
Alignment:
| Q |
18 |
aagaacaagaacaagatcttacaagaaaggtttggattgaatcaaagaagctatggcatatagttggccctgcaattttcagccgtattgcatcttatat |
117 |
Q |
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| T |
14091489 |
aagaagaagaacaagatcttacaagaaaggtttggattgaatcaaagaagctatggcatatagttggccctgcaattttcagccgtattgcatcttatat |
14091588 |
T |
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| Q |
118 |
gatgttggtaatcactcaatcctttgctggtcatcttggtgaccttgaactagcagctatctccatagccaataatgttgttgttggctttgattttggc |
217 |
Q |
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| T |
14091589 |
gatgttggtcatcactcaatcctttgctggtcatcttggtgaccttgaacttgcagctatctccatagccaataatgttgttgttggctttgattttggc |
14091688 |
T |
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| Q |
218 |
ctcttggtacgtttacataacactattccaatagaatatactagtatttcatctcac |
274 |
Q |
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| T |
14091689 |
ctcttggtacgtttacataacactattccaatagaatatactagtatttcatttcac |
14091745 |
T |
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