View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15296_low_35 (Length: 337)
Name: NF15296_low_35
Description: NF15296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15296_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 35123546 - 35123224
Alignment:
| Q |
1 |
agtacctttcaccattagatttatgcaaggtagcacaagtgtgttcttgtttgaggaatagaagcaaaaatgattatttatgggagaaacaagtcaatca |
100 |
Q |
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| T |
35123546 |
agtacctttcaccattagatttatgcaaggtagcacaagtgtgttcttgtttgaggaatagaagcaaaaatgattatttatgggagaaacaagtcaatca |
35123447 |
T |
|
| Q |
101 |
aagatggggtgagttgcttggtgatatagcttaccatgagtggcaatggcatacagcaaaaatggtcaatgaagaaattttattgttacatcaaaatcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35123446 |
aagatggggtgagttgcttggtgatatagcttaccatgagtggcaatggcatacagcaaaaatggtcaatgaagaaattttattgttacatcaaaatcag |
35123347 |
T |
|
| Q |
201 |
agtggatcatgtggtacttttactggtgtttggccatctttacaccttcattcttatttggaaaattttagagacatgattagtttgcttagaaattgtc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35123346 |
agtggatcatgtggtacttttactggtgtttggccatctttacaccttcattcttatttggaaaattttagagacatgattagtttgcttagaaattgtc |
35123247 |
T |
|
| Q |
301 |
caaaaatgagtttgtttatcgcc |
323 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
35123246 |
caaaaatgagtttgtttatcgcc |
35123224 |
T |
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