View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15296_low_39 (Length: 304)
Name: NF15296_low_39
Description: NF15296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15296_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 15 - 287
Target Start/End: Complemental strand, 35343912 - 35343640
Alignment:
| Q |
15 |
aagacaaataattagattgtcatttgaaattatgttaagggattataagtgtaattttctctacttttaattagtatataatatacaaaagtgacatgtt |
114 |
Q |
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| T |
35343912 |
aagacaaataattagattgtcatttgaaattatgttaagggattataagtgtaatattctctacttttaattagtatataatatacaaaagtgacatgtt |
35343813 |
T |
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| Q |
115 |
ttggcacggtggctcttttgattcctcgaagtatgtcataagtatatttgttagcatttttctttggttaaatcacaacggtgtccattatttttacttt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |
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| T |
35343812 |
ttggcacggtggctcttttgattcctcgaagtatgtcataagtatatttgttagcatttttgtttggctaaatcacaacgttgtccattatttttacttt |
35343713 |
T |
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| Q |
215 |
gctcctattttctctccaaaaccagtttttcagccttaggttctagcaatttatgagactataaatttgtcta |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35343712 |
gctcctattttctctccaaaaccagtttttcagccttaggttctagcaatttatgagactataaatttgtcta |
35343640 |
T |
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