View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15296_low_56 (Length: 240)
Name: NF15296_low_56
Description: NF15296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15296_low_56 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 51423114 - 51423321
Alignment:
| Q |
14 |
atactattacacaattatgatagtaacaatataattagacgatgatgtggttagcttgaattaaggtaattaatttatgcgtttttgcctacaaaggtct |
113 |
Q |
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| T |
51423114 |
atactattacacaattatgatagtaacaatataattagacgatgatgtggttagcttgaattaaggtaattaatttatgcgtttttgcctacaaaggtct |
51423213 |
T |
|
| Q |
114 |
gaccaaactgccaacctttgggggttatacgttcagaggtgatacacctgccatcacttgtcgtcaccttgaaggtcaatgtctctccagttaacatggc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51423214 |
gaccaaactgccaacctttgggggttatacgttcagaggtgatacacctgccatcacttgtcgtcaccttgaaggtcaatgtctctccagttaacatggc |
51423313 |
T |
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| Q |
214 |
accagtct |
221 |
Q |
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|||||||| |
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| T |
51423314 |
accagtct |
51423321 |
T |
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