View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15296_low_70 (Length: 207)
Name: NF15296_low_70
Description: NF15296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15296_low_70 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 35044636 - 35044790
Alignment:
| Q |
34 |
gcacagacatcccaggttacatgatatatccaaattgccaacaaatacaaaaccatgtatatacatatattgtcaaaattaaacacggaagaaattagca |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35044636 |
gcacagacatcccaggttacatgatatatccaaattgccaacaaatacaaaaccatgtatatacatatattgtcaaaattaaacacggaagaaattagca |
35044735 |
T |
|
| Q |
134 |
agttcactagccactatagtggaagtttaaacatctcaacaaccctaaataaaac |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35044736 |
agttcactagccactatagtggaagtttaaacatctcaacaaccctaaataaaac |
35044790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University