View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15297_high_16 (Length: 235)
Name: NF15297_high_16
Description: NF15297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15297_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 46046966 - 46046745
Alignment:
| Q |
1 |
ccactctcctctttctttttctctcagggtcattccaccatgacatactcttcttctttttcaccacagaacgtttttgcagcgtcttataatttttcac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |||||||||||| |
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| T |
46046966 |
ccactctcctctttctttttctctcagggtcattccaccatgacatgctcttcttctttttcaccacagaacgttctcgcagcgtctcataatttttcac |
46046867 |
T |
|
| Q |
101 |
cacagaacgttctcgcgatgtctcataataattataattagagtacagagatggagagttcatgctcctcccaacccacaatttggtgttgccgatgctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
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| T |
46046866 |
cacagaacgttctcgcgatgtctcataataattataattagagtacagagatggagagttaacgctcctcccaacccacaatttggtgttgccgatgctt |
46046767 |
T |
|
| Q |
201 |
ctcacatttgcatcatgtaggt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
46046766 |
ctcacatttgcatcatgtaggt |
46046745 |
T |
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