View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15297_low_4 (Length: 457)
Name: NF15297_low_4
Description: NF15297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15297_low_4 |
 | |
|
| [»] scaffold0295 (1 HSPs) |
| | |
|
| [»] scaffold0020 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 436; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 1 - 440
Target Start/End: Complemental strand, 51457863 - 51457424
Alignment:
| Q |
1 |
attaagagattctggaaaaacatgccagaaatataaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
51457863 |
attaagagattctggaaaaacatgccagaaatataaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccgcgt |
51457764 |
T |
|
| Q |
101 |
ccgagattctgagcaaatccataagcaatatatgttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457763 |
ccgagattctgagcaaatccataagcaatatatgttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccac |
51457664 |
T |
|
| Q |
201 |
taaaaggatttgtgtattctttataaggcaaggaagatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatcttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457663 |
taaaaggatttgtgtattctttataaggcaaggaagatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatcttt |
51457564 |
T |
|
| Q |
301 |
caatttcaacacctcaggccatttaagccaatcgctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaaca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457563 |
caatttcaacacctcaggccatttaagccaatcgctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaaca |
51457464 |
T |
|
| Q |
401 |
actcaaataaaaatgcagaaattaccagcaacagaatatc |
440 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51457463 |
actcaaataaaaatgcagaaattaccagcaacagaatatc |
51457424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 44 - 425
Target Start/End: Complemental strand, 51482464 - 51482082
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
143 |
Q |
| |
|
||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| |||| | |
|
|
| T |
51482464 |
ttgaatcatactgcatcagacatattacagtggagcttagtcacagaatcaccacgtccaagctcctgagcaaatccataagcaatatatgtttttgggc |
51482365 |
T |
|
| Q |
144 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
243 |
Q |
| |
|
||||||| ||||||| | || || |||||||||||||||||||| ||| || | ||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
51482364 |
ccatgtctggctttagaacattttcaggcaacttcacagcaaggttaagaatgcctttgaaaggatctgtatattctttatacggcaaggaagatatgaa |
51482265 |
T |
|
| Q |
244 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
343 |
Q |
| |
|
||||||| ||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||| |
|
|
| T |
51482264 |
ctcagcacaatgacgaggcaaactttccctaaataaattagaaggaggccaatctttcaatttcaaaacctgaggccaattaagccaatctgggcgacca |
51482165 |
T |
|
| Q |
344 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattac |
425 |
Q |
| |
|
|||||||||||||| ||||||||||| | |||||||| |||||||||||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
51482164 |
tttgtgtacccagtaaagaattggtgcacattaatatttccctgcattcattcaacaactcaaataaaaattgcagaaattac |
51482082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 44 - 435
Target Start/End: Complemental strand, 51499165 - 51498773
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
143 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||| || || || | |||| ||||||||||||||||||||||| |||| | |
|
|
| T |
51499165 |
ttgaagcatactgcatcagacatatcacaatgaagcttagtcacagaatcaccccgcccaagttcctgatcaaatccataagcaatatatgtttttggtc |
51499066 |
T |
|
| Q |
144 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
243 |
Q |
| |
|
|||| || ||||||| | || || |||||||| ||||||||||| ||| ||| | ||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
51499065 |
ccatatctggctttagaacattttcaggcaactttacagcaaggttaagaacacctttgaaaggatctgtatattctttatacggcaaggaagatatgaa |
51498966 |
T |
|
| Q |
244 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
343 |
Q |
| |
|
||||||| ||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||| |
|
|
| T |
51498965 |
ctcagcacaatgacgaggcaaactttcttcaaataagttagaaggaggccaatctttcaatttcaaaacctgaggccaattaagccaatcagggcgacct |
51498866 |
T |
|
| Q |
344 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattaccagcaacaga |
435 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||| |
|
|
| T |
51498865 |
tttgtgtacccagtaaagaattggtgcacattaatatctccctgcattcaatcaacaactcagataaaaattgcagaaattacaggcaacaga |
51498773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 44 - 435
Target Start/End: Original strand, 30205003 - 30205395
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
143 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || || | |||||||||||||||||||||||||||| |||| | |
|
|
| T |
30205003 |
ttgaagcatactgcatctgacatatcacaatggagcttagtcacagaatcaccccgcccaagctcctgagcaaatccataagcaatatatgtttttgggc |
30205102 |
T |
|
| Q |
144 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
243 |
Q |
| |
|
||||||| |||| || | || | ||||||||| |||||||||| ||| |||| | ||||||| ||| |||||||| | ||||||||||||||||| |
|
|
| T |
30205103 |
ccatgtctggctgtaaaacatctttaggcaacttcgcagcaaggtttagaacaccattgaaaggatctgtatattctttgaacggcaaggaagatatgaa |
30205202 |
T |
|
| Q |
244 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
343 |
Q |
| |
|
||||||| |||||| || ||| ||||| |||||||| |||||||||||||||||||| |||||| |||| |||||| |||||||| || | |||| |
|
|
| T |
30205203 |
ctcagcacaatgacggggcaaactttcctcaaataaattagaaggaggccaatctttcagtttcaaaaccttaggccaattaagccagtccaggagaccc |
30205302 |
T |
|
| Q |
344 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaa-tgcagaaattaccagcaacaga |
435 |
Q |
| |
|
|||||||||||||| ||||||| ||| | ||||||||||||||||||||||| |||| |||| ||||||| |||||||||||| |||||||| |
|
|
| T |
30205303 |
tttgtgtacccagtaaagaatttgtgcaaattaatatctccctgcattcaatcaacacctcagataaaaattgcagaaattactggcaacaga |
30205395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 194
Target Start/End: Complemental strand, 51440310 - 51440159
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatca-ccacgtccgagattctgagcaaatccataagcaa-tatatgttcttgg |
141 |
Q |
| |
|
||||||| |||||||||| |||||||| ||||||||||||||||| ||||| ||| ||| | | || ||| |||||||||| || || ||||| ||| |
|
|
| T |
51440310 |
ttgaagcttactgcatcacacacatcaaaatggagcttagtcacataatcaaccatgtcacaactcctaagctaatccataagaaaatacatgtttttga |
51440211 |
T |
|
| Q |
142 |
ccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagag |
194 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
51440210 |
cccg-tgtctggctttacacaataatccggcaacttcatagcaaggttgagag |
51440159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 51440068 - 51439980
Alignment:
| Q |
350 |
tacccagtgaagaattggtggatatt--aatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagcaacagaa |
436 |
Q |
| |
|
|||||||| || |||||||||||||| |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
51440068 |
tacccagtaaataattggtggatattttaataattccctgcgttcaatcaacaactccaataaaaatgcagaaattaccagcaacagaa |
51439980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 51440140 - 51440071
Alignment:
| Q |
264 |
aaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatc |
333 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||||||| |||||||| |||||| ||||||| ||| |
|
|
| T |
51440140 |
aaagttcctgacataaatcaaaagaaggccaatctttcaaattcaacacgcaaggccaattaagccgatc |
51440071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 35 - 438
Target Start/End: Complemental strand, 43162153 - 43161743
Alignment:
| Q |
35 |
aaaaaggttttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatg |
134 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||||| || ||||| |||| ||||| |||||||||||||||||||| |
|
|
| T |
43162153 |
aaaaaggtttcgaagcatactgcatcaaacacattacaatggagcttagtcacggaatccccgcgtccaagatcctgaggaaatccataagcaatatatg |
43162054 |
T |
|
| Q |
135 |
ttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaagga |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
43162053 |
ttcttggccccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaatggatttgtatattctttataaggcaagga |
43161954 |
T |
|
| Q |
235 |
agatatgaactcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatc- |
333 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
43161953 |
agttatgaactcagcatgatgacgaggtaaacgttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccaattaagccagtcc |
43161854 |
T |
|
| Q |
334 |
------gctgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattacca |
427 |
Q |
| |
|
| ||||||| ||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||| | |
|
|
| T |
43161853 |
ttgcgagttgcgaccccttgtgtaaccagtgaagaatcggtggatattaatgtctctctgcattcaatgaacaactaaaataaaaataaagaaattacta |
43161754 |
T |
|
| Q |
428 |
gcaacagaata |
438 |
Q |
| |
|
|| |||||||| |
|
|
| T |
43161753 |
gccacagaata |
43161743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 47 - 411
Target Start/End: Complemental strand, 27397805 - 27397441
Alignment:
| Q |
47 |
aagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcccca |
146 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||| || | |||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
27397805 |
aagcatactgcatcagacatatcacaatggagcctagtcactgaatcaccccgtccaagctcctgagcaaatccataagcaatatatgtttttggtccca |
27397706 |
T |
|
| Q |
147 |
tgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaactc |
246 |
Q |
| |
|
|||| ||||||| | | ||| |||| |||||||||||||||||||| ||| | ||||||||||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
27397705 |
tgtctggctttagaacttcatcaggcagcttcacagcaaggttgagagcacctttgaaaggatttgtatattctttaaatggcaaggaagatatgaactc |
27397606 |
T |
|
| Q |
247 |
agcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgaccattt |
346 |
Q |
| |
|
||| |||||| |||||| ||| | ||||| | ||||||||||||||||||||||||||| || | |||||| | | | ||| || ||| |||| |
|
|
| T |
27397605 |
cgcacaatgacgcggtaaactttcttcaaatagtttagaaggaggccaatctttcaatttcaatacttgaggccaatcatgtttatccttgggacaattt |
27397506 |
T |
|
| Q |
347 |
gtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaa |
411 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||| |||||| || || |||||||||||| |
|
|
| T |
27397505 |
gtgtacccagtaaagaattggtgcacattaatatctatctgcatcggatcaaaaactcaaataaa |
27397441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 433
Target Start/End: Original strand, 20867541 - 20867918
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
143 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| || || || | |||| |||||||||||||||||||||| |||| | |
|
|
| T |
20867541 |
ttgaaacatactacatcagacatatcacaatgtagcttagtcacagaatcaccccgcccaagctcctgatgaaatccataagcaatatatgtttttggtc |
20867640 |
T |
|
| Q |
144 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
243 |
Q |
| |
|
||| || | || || ||| |||| |||| |||||||||| ||| || | ||||||| ||| ||||||||||| |||||||| |||||||| |
|
|
| T |
20867641 |
ccacgtga------ac---attatcaggcagcttcgcagcaaggttaagatcccctttgaaaggatctgtatattctttatatggcaaggaggatatgaa |
20867731 |
T |
|
| Q |
244 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaacacctcaggccatttaagccaatcgctgcgacca |
343 |
Q |
| |
|
|| | ||| ||||| ||| || || ||||||| ||||||||| ||| ||||||||||| | || |||||| | |||| ||| |||||||| |
|
|
| T |
20867732 |
cttggtgcaatggcgaggcaaatttttctcgaataaat---aaggaggccgatcattcaatttcaatagctgaggccaatcaagcttatccttgcgacca |
20867828 |
T |
|
| Q |
344 |
tttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagcaaca |
433 |
Q |
| |
|
||||| |||||||| ||||| | | | |||||||||||||||||| ||| ||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
20867829 |
tttgtatacccagtaaagaaatcatccactttaatatctccctgcattgaatcaacaagtcaaataaaaatttagaaattatcagcaaca |
20867918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 44 - 311
Target Start/End: Original strand, 6791 - 7058
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcc |
143 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||| ||||||||||||||| ||| || | || |||||||||||||||||| |||| | |||||| |
|
|
| T |
6791 |
ttgaagcatactgcatccgacatgtcgcaatggagctttgtcacagaatcaccaaatccaagctccttagcaaatccataagcaatgtatgcttttggcc |
6890 |
T |
|
| Q |
144 |
ccatgtcaggctttacacaataatccggcaacttcacagcaaggttgagagaaccactaaaaggatttgtgtattctttataaggcaaggaagatatgaa |
243 |
Q |
| |
|
||||||| ||||||| ||| ||| || |||||||| |||||||| | ||||||||| | ||||| ||||||||||||||| |||||| |||||| ||| |
|
|
| T |
6891 |
ccatgtctggctttagccaaccatcaggaaacttcacggcaaggttaatagaaccacttacaggatgtgtgtattctttatacggcaagtaagatacgaa |
6990 |
T |
|
| Q |
244 |
ctcagcatgatgacgaggtaaaagttcctgaaataaatcagaaggaggccaatctttcaatttcaaca |
311 |
Q |
| |
|
||| || |||| ||||||| ||||| |||| | ||||||||||||||||||||||| ||||||| |
|
|
| T |
6991 |
ctcctcaaaatgattaggtaaacattccttaaatgattcagaaggaggccaatctttcaacttcaaca |
7058 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 4299727 - 4299623
Alignment:
| Q |
46 |
gaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgttcttggcccc |
145 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||| ||||||||||| | || || | ||||| |||||||||||||||||||||| |||| ||| |
|
|
| T |
4299727 |
gaagcatactgcatgagacatatcacaatagagcttagtgacagaatcaccccacccaagctcctgagaaaatccataagcaatatatgtttttgggccc |
4299628 |
T |
|
| Q |
146 |
atgtc |
150 |
Q |
| |
|
||||| |
|
|
| T |
4299627 |
atgtc |
4299623 |
T |
|
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Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 136201 - 136292
Alignment:
| Q |
44 |
ttgaagcatactgcatcagacacatcacaatggagcttagtcacagaatcaccacgtccgagattctgagcaaatccataagcaatatatgt |
135 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||| ||||| |||||||| || || || | || || |||||||||||||| |||||| |
|
|
| T |
136201 |
ttgaaacatactacatcagacatatcacaatggagctttgtcacggaatcaccccgcccaagctcctcagaaaatccataagcaaaatatgt |
136292 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 429
Target Start/End: Original strand, 136481 - 136574
Alignment:
| Q |
336 |
tgcgaccatttgtgtacccagtgaagaattggtggatattaatatctccctgcattcaatgaacaactcaaataaaaatgcagaaattaccagc |
429 |
Q |
| |
|
||||||||||||||||||| | ||||| | || | |||||||| |||||||||| ||| |||||||| ||||||||| ||||||||| |||| |
|
|
| T |
136481 |
tgcgaccatttgtgtacccgctaaagaaatcgttcacattaatatttccctgcatttaatcaacaactcgaataaaaattcagaaattatcagc |
136574 |
T |
|
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