View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15298_low_17 (Length: 257)

Name: NF15298_low_17
Description: NF15298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15298_low_17
NF15298_low_17
[»] chr7 (11 HSPs)
chr7 (112-209)||(1575843-1575940)
chr7 (112-201)||(27392591-27392680)
chr7 (112-201)||(28694688-28694777)
chr7 (112-197)||(36482646-36482731)
chr7 (112-209)||(323614-323711)
chr7 (112-206)||(6714223-6714317)
chr7 (113-197)||(36582534-36582618)
chr7 (112-201)||(31280189-31280278)
chr7 (112-169)||(10286414-10286471)
chr7 (112-160)||(8937846-8937894)
chr7 (112-150)||(29988049-29988087)
[»] chr5 (13 HSPs)
chr5 (112-209)||(40987340-40987437)
chr5 (112-209)||(13554768-13554865)
chr5 (112-201)||(13521491-13521580)
chr5 (112-201)||(27110655-27110744)
chr5 (112-209)||(33160518-33160615)
chr5 (112-199)||(41061203-41061290)
chr5 (112-194)||(1495912-1495994)
chr5 (112-205)||(12291381-12291474)
chr5 (112-201)||(42716135-42716224)
chr5 (112-196)||(4986181-4986265)
chr5 (112-176)||(35449688-35449752)
chr5 (119-209)||(20210055-20210145)
chr5 (112-156)||(7946536-7946580)
[»] chr4 (20 HSPs)
chr4 (112-209)||(24575166-24575263)
chr4 (112-206)||(9279925-9280019)
chr4 (112-209)||(47498849-47498946)
chr4 (112-201)||(46251940-46252029)
chr4 (128-206)||(7700297-7700375)
chr4 (112-209)||(42414558-42414655)
chr4 (112-189)||(18780958-18781035)
chr4 (112-201)||(3756963-3757052)
chr4 (112-201)||(34276948-34277037)
chr4 (112-176)||(47997031-47997095)
chr4 (112-201)||(42429989-42430078)
chr4 (112-201)||(24859008-24859097)
chr4 (112-172)||(37602649-37602709)
chr4 (128-190)||(6184090-6184152)
chr4 (122-172)||(31568178-31568228)
chr4 (112-201)||(20580592-20580681)
chr4 (112-195)||(56078437-56078520)
chr4 (112-206)||(24319042-24319136)
chr4 (112-209)||(7611686-7611782)
chr4 (128-201)||(40436458-40436531)
[»] chr8 (17 HSPs)
chr8 (112-209)||(43620048-43620145)
chr8 (112-201)||(6345305-6345394)
chr8 (112-201)||(31127268-31127357)
chr8 (112-201)||(37948952-37949041)
chr8 (112-206)||(26721170-26721264)
chr8 (128-209)||(1265121-1265202)
chr8 (112-206)||(13470864-13470958)
chr8 (112-196)||(26721290-26721374)
chr8 (112-209)||(32906903-32907000)
chr8 (112-209)||(4602596-4602693)
chr8 (112-209)||(4267345-4267442)
chr8 (112-201)||(3106183-3106272)
chr8 (112-176)||(42200110-42200174)
chr8 (117-196)||(27808983-27809062)
chr8 (112-173)||(10183278-10183339)
chr8 (112-207)||(3773822-3773915)
chr8 (161-201)||(40619728-40619768)
[»] chr6 (7 HSPs)
chr6 (112-209)||(7608291-7608388)
chr6 (112-201)||(16705374-16705456)
chr6 (112-209)||(21946710-21946807)
chr6 (112-207)||(3901145-3901240)
chr6 (112-190)||(10484409-10484487)
chr6 (112-193)||(10386152-10386232)
chr6 (117-201)||(33747876-33747960)
[»] chr2 (8 HSPs)
chr2 (112-209)||(16672012-16672110)
chr2 (112-198)||(21352330-21352416)
chr2 (112-169)||(18511557-18511614)
chr2 (118-209)||(7753802-7753890)
chr2 (112-209)||(42295820-42295916)
chr2 (112-152)||(10997252-10997292)
chr2 (112-196)||(22596075-22596159)
chr2 (123-196)||(34439851-34439924)
[»] chr1 (11 HSPs)
chr1 (112-197)||(14461716-14461801)
chr1 (112-201)||(5559393-5559482)
chr1 (112-207)||(41198518-41198613)
chr1 (124-209)||(24063923-24064008)
chr1 (112-201)||(41074903-41074992)
chr1 (112-209)||(24614743-24614840)
chr1 (112-202)||(33719608-33719698)
chr1 (112-207)||(16902572-16902667)
chr1 (112-209)||(7004675-7004772)
chr1 (112-200)||(28655580-28655668)
chr1 (161-201)||(11956335-11956375)
[»] chr3 (10 HSPs)
chr3 (128-209)||(37282656-37282737)
chr3 (128-206)||(19636560-19636638)
chr3 (112-209)||(32055880-32055977)
chr3 (112-209)||(25706301-25706399)
chr3 (112-201)||(1030461-1030550)
chr3 (128-196)||(39717244-39717312)
chr3 (112-201)||(19997374-19997464)
chr3 (112-209)||(29283000-29283092)
chr3 (112-176)||(40166829-40166893)
chr3 (123-201)||(48085314-48085392)
[»] scaffold0034 (1 HSPs)
scaffold0034 (112-194)||(47780-47862)
[»] scaffold0717 (1 HSPs)
scaffold0717 (112-196)||(5490-5574)
[»] scaffold0140 (1 HSPs)
scaffold0140 (112-197)||(15490-15575)
[»] scaffold0396 (1 HSPs)
scaffold0396 (128-194)||(1290-1356)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 1575843 - 1575940
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1575843 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 1575940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 27392591 - 27392680
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27392591 aatatttttggatgtgtttggatgttgttttgaaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccaaaccgaacc 27392680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 28694688 - 28694777
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  28694688 aatatttttttatgtgtttggatgttgttatggaaaaaccgctatgatcggattggatttcggattgcgttttcaaaaccaaaccgaacc 28694777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 36482731 - 36482646
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccg 197  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||  |||||||||||||||||    
T  36482731 aatatttttggatgtgtttggatgttgttttagaaaaaccactatgatcggatcggttttcggattgtcttttcaaaaccgaaccg 36482646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 323711 - 323614
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||  | |||||||||||||||| |||  |||||||    
T  323711 aatatttttggatgtgtttggatgttgttttggcaaaaccgctatgattggttcggatttcggatcaccttttcaaaaccgaaccaaacagaaccgaa 323614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 6714317 - 6714223
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||  | || ||||||| |||||||||||||||    
T  6714317 aatatatttggatgtgtttggatgttattttgtaaaaaccgctaggatcggatcggatttcgaatcactttctcaaaactgaaccgaaccaaacc 6714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 36582618 - 36582534
Alignment:
Q  113 atatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccg 197  Q
    |||| |||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||||  | |||||||||||||||||    
T  36582618 atatatttggatgcgtttggatgttgttttgtaaaaaccgctaagatctgatcggatttcggatcactttttcaaaaccgaaccg 36582534  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 31280278 - 31280189
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||  ||||||||||||||||| ||||| || || ||||||||||||||| ||||  | |||||||||||||||||||||    
T  31280278 aatatatttggatacgtttggatgttgttttgtaaaaatcgttaagatcggatcggattttggatcactttttcaaaaccgaaccgaacc 31280189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 10286414 - 10286471
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||    
T  10286414 aatatttttggatgtgtttggatgttgttttggcaaaaccgctataattggttcggat 10286471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 8937894 - 8937846
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatc 160  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  8937894 aatatttttggatgcgtttggatgttgttttgtaaaaaccgctaggatc 8937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 29988087 - 29988049
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaac 150  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  29988087 aatatttttggatgtgtttggatgttgttttgtaaaaac 29988049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 40987340 - 40987437
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40987340 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 40987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 13554768 - 13554865
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||| |||||||||||||||| |||||| |||||    
T  13554768 aatatttttagatgtgtttggatgttgttttggaaaaaccgctataattagatcggatttcgaattgcattttcaaaaccgaaccaaaccaagccgaa 13554865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 13521491 - 13521580
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||   |||||||||||  ||||| |||||||||||||||||||||    
T  13521491 aatatttttggatgtgtttagatgttgttttggaataaccgctatgactagatcggatttcaaattgcattttcaaaaccgaaccgaacc 13521580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 27110655 - 27110744
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||  | ||| |||||||||||||||||    
T  27110655 aatatatttggatgtgtttggatgttgttttgtaaaaaccgctaagatcggatcggattctggatcacttttccaaaaccgaaccgaacc 27110744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 33160518 - 33160615
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||  | ||||||||| |||||| |||| |||||||    
T  33160518 aatatttttggatgtgtttggaggttgttttggaaaaactgttatgatcagttcggatttcggatcaccttttcaaaatcgaaccaaaccgaaccgaa 33160615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 41061203 - 41061290
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaa 199  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||| ||||||| ||||||| ||||| | |||||||||||||||||||    
T  41061203 aatatatttggatgcgtttggatattgttttgtaaaaaccgctaagatcggaacggattttggattactttttcaaaaccgaaccgaa 41061290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 1495994 - 1495912
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaa 194  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||||  | ||||||||||||||    
T  1495994 aatatatttggatgtgtttggatattgttttgtaaaaaccgctaagatcggatcgggtttcggatcaccttttcaaaaccgaa 1495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 12291474 - 12291381
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaac 205  Q
    ||||||||||||||  |||||||||||||||| ||||||| ||| ||| ||||||||||| |||     ||||||| |||||||||||||||||    
T  12291474 aatatttttggatgcatttggatgttgttttgtaaaaacctctaagattggatcggattttggaccattttttcaataccgaaccgaaccaaac 12291381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 42716224 - 42716135
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||| ||| ||||||||||||||||| |||||  |||| |||||  |  ||||||||||| | |||||||||| ||||| ||||    
T  42716224 aatatttttgaatgcgtttggatgttgttttgtaaaaaaagctaggatcgatttagatttcggattactttttcaaaactgaaccaaacc 42716135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 4986181 - 4986265
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    ||||||||| |||| ||||||||||||||||| | ||||| ||| ||||  ||| ||||| ||||  | ||||||||||||||||    
T  4986181 aatattttttgatgcgtttggatgttgttttgtataaaccactaggatcaaatcagatttaggatcactttttcaaaaccgaacc 4986265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35449752 - 35449688
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggat 176  Q
    ||||| ||| |||| ||||||||||||||||| ||||||||||| |||||| |||| ||| ||||    
T  35449752 aatatatttagatgcgtttggatgttgttttgtaaaaaccgctaagatcggttcggcttttggat 35449688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 20210145 - 20210055
Alignment:
Q  119 ttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| ||||||||||| | ||||   |||||||||  ||| |||||| |||| ||||||  ||||||||||| |||| ||||||||||||    
T  20210145 ttggacgtgtttggatgatattttatgaaaaccgctcagattggatcgtattttggattgaattttcaaaaccaaaccaaaccaaaccgaa 20210055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 7946580 - 7946536
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctat 156  Q
    |||||||||||||| | ||| ||||||||||| ||||||||||||    
T  7946580 aatatttttggatgcgcttgaatgttgttttgtaaaaaccgctat 7946536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 24575263 - 24575166
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24575263 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 24575166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 9279925 - 9280019
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9279925 aatatttttggatttgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacctaacc 9280019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 47498946 - 47498849
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||  | |||| |||||||||||||||| |||||||    
T  47498946 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgattggttcggatttcggatcacctttttaaaaccgaaccgaaccgaaccgaa 47498849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 46252029 - 46251940
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||  | |||||||||||||||||||||    
T  46252029 aatatttttggatgtgtttggatgttgttttggaaaagccgctatgattggttcggatttcggatcaccttttcaaaaccgaaccgaacc 46251940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 7700297 - 7700375
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  7700297 tttggatgttgttttagaaaaaccgctatgatcggatcgaatttcagattgcgttttcaaaactgaaccgaaccaaacc 7700375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 42414655 - 42414558
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||  | |||||||||||||||| |||| |||||||    
T  42414655 aatatatttggatgcgtttggatgttgttttgtaaaaaccgctaagatcggatcggattttggatcactttttcaaaaccgaaccaaaccgaaccgaa 42414558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 18781035 - 18780958
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaa 189  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||| ||| |||||||||||    
T  18781035 aatatttttggatgtgtttgaattttgttttggaaaaaccgttatgatcagatcagatttcgaattacgttttcaaaa 18780958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 3756963 - 3757052
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||| ||||| ||||||||||  |||||||| || ||||||||||||||||||||  | |||||||||||||||| ||||    
T  3756963 aatatgtttggatgcgtttgaatgttgttttttaaaaaccgttaagatcggatcggatttcggatcactttttcaaaaccgaaccaaacc 3757052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 34276948 - 34277037
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||| |||  ||||  | ||||||||| |||||||||||    
T  34276948 aatatatttggatgcgtttggatgttgttttgtaaaaaccgctaagatcggatcgaattctggatcactttttcaaaatcgaaccgaacc 34277037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 47997095 - 47997031
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggat 176  Q
    ||||||||| |||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  47997095 aatatttttcgatgtgcttgaatgttgttttgtaaaaaccgctaggatcggatcggatttcggat 47997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 42429989 - 42430078
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||  |||||||||| |||||||||  | ||||||||||| |||| ||||    
T  42429989 aatatatttggatccgtttggatgttgttttgtaaaaaccgctcagatcggatcgaatttcggatcactttttcaaaaccaaaccaaacc 42430078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 24859008 - 24859097
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||| |||||||||||||||||   |||||  ||||||| |  ||| ||||||||||| ||||||  |||||||||||||||||||||    
T  24859008 aatattattggatgtgtttggatgacattttgtgaaaaccgtttggattggatcggattttggattgatttttcaaaaccgaaccgaacc 24859097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 37602709 - 37602649
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttc 172  Q
    |||||||||||||||||||| ||||| ||||| |||||| |||| ||||||||| ||||||    
T  37602709 aatatttttggatgtgtttgaatgttcttttgtaaaaactgctaggatcggatctgatttc 37602649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 6184152 - 6184090
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaac 190  Q
    |||||||||||||||| ||||| || || ||||||||||||||||||||  | ||||||||||    
T  6184152 tttggatgttgttttgtaaaaatcgttaggatcggatcggatttcggatcactttttcaaaac 6184090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 31568228 - 31568178
Alignment:
Q  122 gatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttc 172  Q
    |||||| ||||||||||||||| ||||||||||| || |||||||||||||    
T  31568228 gatgtggttggatgttgttttgtaaaaaccgctaagaccggatcggatttc 31568178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 20580592 - 20580681
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||| | ||| ||||||||||| || ||  |||| |||||||||||||||| |||  | ||||||||||| |||| ||||    
T  20580592 aatatttttggatgcgcttgaatgttgttttgtaagaattgctaggatcggatcggatttcagatcactttttcaaaaccaaaccaaacc 20580681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 56078437 - 56078520
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaac 195  Q
    |||||||| ||||| ||||||||||||||| | |||||  | | |||||||||||||||||  ||  | |||||||||||||||    
T  56078437 aatattttcggatgcgtttggatgttgtttagtaaaaattgttgtgatcggatcggatttcaaatcactttttcaaaaccgaac 56078520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 24319042 - 24319136
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    |||||||||||||| ||||||||||||||||   ||||||| || |||||| | | |||| ||||  | || ||||||||||||| |||| ||||    
T  24319042 aatatttttggatgcgtttggatgttgttttatcaaaaccgttaggatcggtttgaattttggatcactttctcaaaaccgaaccaaaccgaacc 24319136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 7611686 - 7611782
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||| || |||||||| || ||||| ||||||||||| |||| |||| |||||| |||    || ||||||||||||| ||| ||||||||    
T  7611686 aatatttttggttgcgtttggat-ttattttgtaaaaaccgctaggatcagatcagatttcagatcattttctcaaaaccgaaccaaactaaaccgaa 7611782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 40436458 - 40436531
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||| |||||  | || |||| ||||||| |||||||  | ||||||||||| |||||||||    
T  40436458 tttggatgttgttttgtaaaaattgttacgatcagatcggacttcggatcactttttcaaaaccaaaccgaacc 40436531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 43620145 - 43620048
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43620145 aatatttttggatgtgtttggatgttgctttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 43620048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 6345305 - 6345394
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6345305 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccaaaccgaacc 6345394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 31127357 - 31127268
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31127357 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccaaaccgaacc 31127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 37949041 - 37948952
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37949041 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccaaaccgaacc 37948952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 26721264 - 26721170
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  26721264 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcttattttggattgcgttttcaaaaccgaaccgaaccaaacc 26721170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 1265121 - 1265202
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1265121 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccaaaccgaaccaaaccgaa 1265202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 13470864 - 13470958
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||| |||||||||    
T  13470864 aatatttttggatgtgtttggatgttgttttggaaaaaacgctacgatcggatcggttttcggtttgccttttcaaaaccgaaccaaaccaaacc 13470958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 26721374 - 26721290
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  26721374 aatatttttggatgtgtttggacgttgttttggaaaaaccgctatgatcaaatcagatttcggattgcgttttcaaaaccgaacc 26721290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 32906903 - 32907000
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||  | |||||||||||||||| |||| |||||||    
T  32906903 aatatttttggatgtgtttggatgttgttttggcaaaaccgctatgattggttcggatttcggatcacattttcaaaaccgaaccaaaccgaaccgaa 32907000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 4602596 - 4602693
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||  | |||||||||||||||| |||| |||||||    
T  4602596 aatatttttggacgtgtttggatgttgttttggcaaaaccgctatgattggttcggatttcggatcacattttcaaaaccgaaccaaaccgaaccgaa 4602693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 4267345 - 4267442
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||| ||||  | |||||||||||||||| |||| |||||||    
T  4267345 aatatatttggatgcgtttggatgttattttgtaaaaaccgctaagatcggatcggattttggatcaccttttcaaaaccgaaccaaaccgaaccgaa 4267442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 3106183 - 3106272
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||| ||||||||||||||||| |||||| |||| ||||| ||||||||| ||||  | || ||||||||||||||||||    
T  3106183 aatatttttggatgcgtttggatgttgttttgtaaaaactgctaggatcgtatcggattttggatcactttctcaaaaccgaaccgaacc 3106272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 42200174 - 42200110
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggat 176  Q
    ||||||||| |||||||||||||||||||||  |||||||| ||||||||||||| |||||||||    
T  42200174 aatatttttagatgtgtttggatgttgttttataaaaaccgttatgatcggatcgaatttcggat 42200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 27809062 - 27808983
Alignment:
Q  117 ttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    ||||||||||||||| |||||| || | |||||||| || |||||||||||||||| ||   | ||||||||||||||||    
T  27809062 ttttggatgtgtttgaatgttggttagtaaaaaccgttaagatcggatcggatttcagaccactttttcaaaaccgaacc 27808983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 10183339 - 10183278
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcg 173  Q
    ||||||||||||||||||||||||||||||   |||||| | || ||| |||||||||||||    
T  10183339 aatatttttggatgtgtttggatgttgtttcctaaaaactgttaagattggatcggatttcg 10183278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 3773822 - 3773915
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccg 207  Q
    ||||| |||||||| |||||||||||| |||| ||||||| ||| ||| ||||||||||| ||||  | ||||||||||| |||| |||| |||||    
T  3773822 aatatatttggatgcgtttggatgttg-tttgtaaaaaccactaagat-ggatcggattttggatcactttttcaaaaccaaaccaaaccgaaccg 3773915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 40619768 - 40619728
Alignment:
Q  161 ggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  40619768 ggatcggattttggattgatttttcaaaaccgaaccgaacc 40619728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 7608388 - 7608291
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7608388 aatatttttggatttgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 7608291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 16705456 - 16705374
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  16705456 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcg-------gattgcgttttcaaaaccgaaccgaacc 16705374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 21946710 - 21946807
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||    |||||||||||||||| ||||||||||||    
T  21946710 aatattttttgatgtgtttggatgttgttttggaaaaaccgctataattggttcggatttcggatcagcttttcaaaaccgaaccaaaccaaaccgaa 21946807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 3901240 - 3901145
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccg 207  Q
    ||||||||||||||||||||||||||||||||  |||||||| | |||| ||| ||| |||||||  | |||| |||||||||||||||| |||||    
T  3901240 aatatttttggatgtgtttggatgttgttttgccaaaaccgccaagatcagattggacttcggatcacttttttaaaaccgaaccgaaccgaaccg 3901145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 10484487 - 10484409
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaac 190  Q
    |||||||||  ||| ||||||||||||| ||  |||||||||||||||||||| |||||||||||||| || |||||||    
T  10484487 aatattttttaatgcgtttggatgttgtcttctaaaaaccgctatgatcggattggatttcggattgctttctcaaaac 10484409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 10386152 - 10386232
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccga 193  Q
    |||| |||||||||  || ||||||||||||| ||||||||||| ||||  ||||||||||||||  | |||||||||||||    
T  10386152 aatacttttggatgcattcggatgttgttttgtaaaaaccgctaggatcatatcggatttcggatcac-ttttcaaaaccga 10386232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 33747876 - 33747960
Alignment:
Q  117 ttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||| || ||||||||| | ||| ||||| ||| |||||  ||||||||| || ||||||||||| ||| |||||    
T  33747876 ttttggatgtgtttagaagttgttttgtagaaagcgctaagattggatcatatttcggatagctttttcaaaacctaactgaacc 33747960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 16672012 - 16672110
Alignment:
Q  112 aatatttttggatgtgt-ttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16672012 aatatttttggatgtgtgttggatgttgttttggaaaaactgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 16672110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 21352416 - 21352330
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccga 198  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||  | |||||||||||| |||||    
T  21352416 aatatatttggatgcgtttggatgttgttttgtaaaaaccgctaagatcggatcggattttggatcactttttcaaaaccgtaccga 21352330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 18511557 - 18511614
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||    
T  18511557 aatatttttggatgtgtttggatgttgttttggcaaaaccgctataattggttcggat 18511614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 7753802 - 7753890
Alignment:
Q  118 tttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||| |||||||||||| |||||   |||||||||||||||||||| |||  | ||||||||||| |||  ||| ||||||||    
T  7753802 tttggatgtgttttgatgttgttttgtaaaaa---ctatgatcggatcggatttcagataactttttcaaaaccaaacaaaacaaaaccgaa 7753890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 42295916 - 42295820
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| |||||||| ||||| ||||||||||| |||||| |||| |||||| |||| ||||||||  | ||||||||| |||||| |||| |||||||    
T  42295916 aatatatttggatgcgtttgtatgttgttttgtaaaaactgctaagatcggttcggctttcggatcac-ttttcaaaatcgaaccaaaccgaaccgaa 42295820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 10997252 - 10997292
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccg 152  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  10997252 aatatttttggatgtgtttggatgttgttttgtaaaaaccg 10997292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 22596075 - 22596159
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    ||||| ||||||||  ||| |||||||||||| ||||| ||||| |||| |||||||||||||||  | ||||||||||| ||||    
T  22596075 aatatatttggatgcatttcgatgttgttttgtaaaaatcgctaagatcagatcggatttcggatcactttttcaaaaccaaacc 22596159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 34439851 - 34439924
Alignment:
Q  123 atgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    ||||||||| |||||  |||| |||||||||||  || |||||||||| |||||| | ||||||||||||||||    
T  34439851 atgtgtttgaatgttagtttgtaaaaaccgctagaattggatcggattccggattactttttcaaaaccgaacc 34439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 14461716 - 14461801
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccg 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14461716 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccg 14461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 5559393 - 5559482
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  5559393 aatatttttggatgtgtttggatgttgttttggaaaaaccgccatgatcggatcagatttcggattgcattttcaaaaccaaaccgaacc 5559482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 41198613 - 41198518
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccg 207  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||| |||||| ||||| |||| |||||    
T  41198613 aatatatttggatgtgattggatgttgttttgtaaaaaccgctaagatcggatcggatttcggatcacttttccaaaactgaaccaaaccgaaccg 41198518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 24064008 - 24063923
Alignment:
Q  124 tgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||| || | |||| |||||||    
T  24064008 tgtgtatggatgttgttttggaaaaaccgctatgattggatcggatttcggatcactttttcaaaaccaaatcaaaccgaaccgaa 24063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 41074903 - 41074992
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || ||| | |||||||||  | | ||||||||| |||||||||    
T  41074903 aatatttttggatgtgtttggatgttgttttgaaaaaaccgctatggtcagattgaatttcggatcacctcttcaaaaccaaaccgaacc 41074992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 24614743 - 24614840
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||| ||||||||  ||||||||| |||||| ||||||||||| ||||||||| ||||| ||||  | |||| ||||||||||| |||| |||||||    
T  24614743 aatatatttggatgcttttggatgtcgttttgtaaaaaccgctaagatcggatcagattttggatcacttttttaaaaccgaaccaaaccgaaccgaa 24614840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 33719698 - 33719608
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacca 202  Q
    |||||||||||||| ||||||||||||||||| |||||| |||| ||||| |||  ||||| |||  | |||||||||| |||| ||||||    
T  33719698 aatatttttggatgcgtttggatgttgttttgtaaaaactgctaggatcgaatcaaatttcagatcactttttcaaaactgaactgaacca 33719608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 16902572 - 16902667
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccg 207  Q
    ||||||||| |||||||||||||||||||||| |||||| || | |||| |||   |||| ||||  | |||||||||||||||| |||| |||||    
T  16902572 aatatttttagatgtgtttggatgttgttttgcaaaaactgcaaggatcagattaaattttggatcactttttcaaaaccgaaccaaaccgaaccg 16902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 7004675 - 7004772
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    |||||| ||||||||||||| |||   |||||  |||||||||  ||| ||||||||||| ||||||  |||||||||||||||| |||  |||||||    
T  7004675 aatattattggatgtgtttgaatgacattttgtgaaaaccgcttggattggatcggattttggattgatttttcaaaaccgaaccaaactgaaccgaa 7004772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 28655580 - 28655668
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaac 200  Q
    ||||| ||| |||||||||||||||||||||| ||||| |  || |||||||||| ||||| |||  | || |||||||| ||||||||    
T  28655580 aatatatttcgatgtgtttggatgttgttttgtaaaaatcaataggatcggatcgaatttcagatcactttctcaaaaccaaaccgaac 28655668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 11956375 - 11956335
Alignment:
Q  161 ggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  11956375 ggatcggattttggattgatttttcaaaaccgaaccgaacc 11956335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 37282737 - 37282656
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37282737 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 37282656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 19636638 - 19636560
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaacc 206  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19636638 tttggatgttgttttggaaaagccgcgatgatcggatcggatttcggattgagttttcaaaaccgaaccgaaccaaacc 19636560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 32055977 - 32055880
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||  | |||||||||||||||| || | |||||||    
T  32055977 aatatttttggatgtgtttggatgttgttttggcaaaaccgctatgattggttcggatttcggatcacattttcaaaaccgaaccaaatcgaaccgaa 32055880  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 25706301 - 25706399
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttg-gaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||| |||  | |||||||||||||||| |||| |||||||    
T  25706301 aatatttttggatgtgtttggatgttgttttgaaaaaaaccgctatgatcggttcggacttcagataaccttttcaaaaccgaaccaaaccgaaccgaa 25706399  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 1030461 - 1030550
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||  | ||||| |||||||||| ||||    
T  1030461 aatatatttggatgcgtttggatgttgttttgtaaaaaccgctaagatcggatcggattttggatcactttttcgaaaccgaaccaaacc 1030550  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 39717312 - 39717244
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||||  | |||| |||||||||||    
T  39717312 tttggatgttgtattggaaaaaccgctatgatcggttcggattttggatcaccttttgaaaaccgaacc 39717244  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 19997374 - 19997464
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcgga-tttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||| |||||||| |||| |||||||| | | |||||| |||| |||||||||||| ||||||||  | |||||||||||||||| ||||    
T  19997374 aatatatttggatgcgtttagatgttgtctcgtaaaaactgctaagatcggatcggattttcggatcactttttcaaaaccgaaccaaacc 19997464  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 29283000 - 29283092
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaaccaaaccgaa 209  Q
    ||||||||||||||  |||||||||||||||| |||||||||||     ||| ||||||||||||  | || ||||||  |||||||||| |||||||    
T  29283000 aatatttttggatgcatttggatgttgttttgtaaaaaccgcta-----ggaacggatttcggatcactttctcaaaattgaaccgaaccgaaccgaa 29283092  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 40166893 - 40166829
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggat 176  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||||| |||  |||||||| ||||||    
T  40166893 aatatatttagatgtgtttgaatgttgttttgtaaaaaccgctaagattcgatcggatatcggat 40166829  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 48085392 - 48085314
Alignment:
Q  123 atgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccgaacc 201  Q
    ||||||||||||||||||||| ||||| || |   |||  ||||||||||||||  | |||||||||||||||| ||||    
T  48085392 atgtgtttggatgttgttttgtaaaaagcgatggtatcaaatcggatttcggatcactttttcaaaaccgaaccaaacc 48085314  T

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Target: scaffold0034 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 47862 - 47780
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaa 194  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||  | || |||||||||||    
T  47862 aatatttgtggatgtgtttggatgttgttttgtaaaaatcgctatgatcagatcggatttcggatcactttctcaaaaccgaa 47780  T

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Target: scaffold0717 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 5490 - 5574
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaacc 196  Q
    |||||||||||||| | ||||||||||||||| || || ||||| |||||||||||||||  |||  | ||||||||||| ||||    
T  5490 aatatttttggatgcgcttggatgttgttttgtaagaatcgctaggatcggatcggatttaagatcactttttcaaaaccaaacc 5574  T

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Target: scaffold0140 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 15490 - 15575
Alignment:
Q  112 aatatttttggatgtgtttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaaccg 197  Q
    ||||||||| |||| |||||| |||||||||| |||||  |||| ||||||||  ||||||||||  | ||||||||||| |||||    
T  15490 aatatttttagatgcgtttggttgttgttttgtaaaaatagctaggatcggattagatttcggataactttttcaaaaccaaaccg 15575  T

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Target: scaffold0396 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 1356 - 1290
Alignment:
Q  128 tttggatgttgttttggaaaaaccgctatgatcggatcggatttcggattgcgttttcaaaaccgaa 194  Q
    ||||||| |||||||| ||| ||||||| ||||| ||||||||||||||  | ||||||||| ||||    
T  1356 tttggatattgttttgtaaacaccgctaagatcgaatcggatttcggatcactttttcaaaatcgaa 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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