View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15298_low_3 (Length: 481)

Name: NF15298_low_3
Description: NF15298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15298_low_3
NF15298_low_3
[»] chr7 (48 HSPs)
chr7 (170-346)||(15129941-15130117)
chr7 (1-156)||(9181538-9181693)
chr7 (1-156)||(25637583-25637738)
chr7 (13-172)||(7732884-7733043)
chr7 (1-162)||(48247976-48248138)
chr7 (1-161)||(15712366-15712526)
chr7 (1-162)||(16081299-16081460)
chr7 (1-156)||(5745645-5745800)
chr7 (1-156)||(14311672-14311827)
chr7 (1-156)||(26026703-26026858)
chr7 (1-162)||(786782-786944)
chr7 (1-162)||(7732488-7732649)
chr7 (13-156)||(27245601-27245744)
chr7 (5-163)||(28687592-28687750)
chr7 (42-162)||(16917713-16917833)
chr7 (1-162)||(16081684-16081845)
chr7 (1-162)||(11971334-11971499)
chr7 (3-162)||(25637197-25637357)
chr7 (1-164)||(26048332-26048494)
chr7 (12-156)||(35161197-35161342)
chr7 (1-156)||(26026323-26026479)
chr7 (1-163)||(27245202-27245365)
chr7 (22-162)||(5333880-5334020)
chr7 (1-149)||(28687884-28688032)
chr7 (1-162)||(2758083-2758244)
chr7 (1-162)||(5746024-5746186)
chr7 (1-162)||(48247587-48247752)
chr7 (1-163)||(24929688-24929855)
chr7 (1-161)||(39388651-39388813)
chr7 (1-162)||(9181794-9181958)
chr7 (359-431)||(15129538-15129610)
chr7 (1-162)||(34595157-34595318)
chr7 (51-156)||(5334254-5334359)
chr7 (2-161)||(9394117-9394274)
chr7 (1-156)||(787167-787326)
chr7 (1-137)||(14311340-14311477)
chr7 (1-156)||(11973787-11973942)
chr7 (1-156)||(26047963-26048109)
chr7 (12-68)||(5184488-5184544)
chr7 (1-103)||(33880970-33881076)
chr7 (71-155)||(35160660-35160746)
chr7 (4-163)||(4477701-4477860)
chr7 (72-162)||(39136686-39136776)
chr7 (48-162)||(45815344-45815457)
chr7 (3-99)||(9393799-9393894)
chr7 (52-103)||(45815501-45815553)
chr7 (28-72)||(35160892-35160936)
chr7 (74-162)||(39136991-39137079)
[»] chr4 (57 HSPs)
chr4 (1-163)||(28465466-28465628)
chr4 (1-163)||(21034234-21034397)
chr4 (1-162)||(26974283-26974445)
chr4 (1-163)||(34789381-34789543)
chr4 (1-162)||(14440213-14440374)
chr4 (1-162)||(56077709-56077870)
chr4 (1-172)||(12593014-12593185)
chr4 (1-156)||(54440954-54441109)
chr4 (1-156)||(45838932-45839089)
chr4 (1-153)||(41114166-41114320)
chr4 (1-162)||(46737040-46737201)
chr4 (3-149)||(28166017-28166163)
chr4 (1-162)||(46736655-46736816)
chr4 (1-156)||(14439834-14439989)
chr4 (1-156)||(28465087-28465242)
chr4 (1-162)||(36168716-36168877)
chr4 (1-156)||(34789767-34789923)
chr4 (1-156)||(54440577-54440730)
chr4 (1-108)||(34807524-34807631)
chr4 (1-162)||(19528869-19529031)
chr4 (1-162)||(12593408-12593569)
chr4 (1-162)||(33689829-33689989)
chr4 (1-162)||(55677342-55677504)
chr4 (1-156)||(6616678-6616834)
chr4 (12-155)||(45838554-45838697)
chr4 (1-162)||(19529078-19529240)
chr4 (1-162)||(21034621-21034783)
chr4 (22-156)||(33777638-33777772)
chr4 (1-162)||(34807116-34807278)
chr4 (1-156)||(24851850-24852006)
chr4 (1-153)||(35643564-35643728)
chr4 (22-156)||(33778018-33778152)
chr4 (1-156)||(41608380-41608536)
chr4 (1-156)||(36168335-36168493)
chr4 (22-137)||(6617068-6617183)
chr4 (2-125)||(35193345-35193467)
chr4 (1-156)||(16214880-16215035)
chr4 (71-162)||(24851316-24851407)
chr4 (74-156)||(1397601-1397683)
chr4 (2-125)||(17504345-17504468)
chr4 (1-68)||(24851559-24851626)
chr4 (34-156)||(26974662-26974785)
chr4 (71-162)||(41608870-41608961)
chr4 (24-103)||(40160153-40160231)
chr4 (1-156)||(229544-229699)
chr4 (28-72)||(35643970-35644014)
chr4 (1-161)||(18965141-18965301)
chr4 (51-161)||(23986521-23986632)
chr4 (2-156)||(40160477-40160630)
chr4 (1-156)||(229167-229322)
chr4 (2-162)||(17503974-17504133)
chr4 (3-162)||(35193691-35193848)
chr4 (1-94)||(18965521-18965614)
chr4 (1-156)||(24336148-24336303)
chr4 (55-163)||(30597958-30598066)
chr4 (89-156)||(44219381-44219448)
chr4 (51-162)||(51309939-51310051)
[»] chr5 (32 HSPs)
chr5 (1-162)||(28290029-28290190)
chr5 (1-163)||(19291355-19291518)
chr5 (22-162)||(18149733-18149873)
chr5 (3-161)||(8419008-8419165)
chr5 (1-162)||(15029694-15029855)
chr5 (6-156)||(38900650-38900800)
chr5 (1-162)||(21371081-21371242)
chr5 (1-163)||(38901027-38901187)
chr5 (1-162)||(28289684-28289845)
chr5 (1-162)||(15115480-15115638)
chr5 (4-156)||(4966822-4966973)
chr5 (1-148)||(39083372-39083521)
chr5 (1-162)||(18150108-18150270)
chr5 (1-162)||(4967154-4967317)
chr5 (1-108)||(5161636-5161744)
chr5 (12-161)||(32697619-32697771)
chr5 (2-99)||(16752645-16752741)
chr5 (2-162)||(27307061-27307220)
chr5 (2-161)||(10721787-10721945)
chr5 (1-156)||(14340792-14340950)
chr5 (82-156)||(14340404-14340478)
chr5 (28-149)||(21370699-21370828)
chr5 (1-103)||(22651404-22651506)
chr5 (22-103)||(5161974-5162056)
chr5 (2-99)||(27307444-27307543)
chr5 (2-103)||(32305877-32305977)
chr5 (2-162)||(41834445-41834605)
chr5 (2-161)||(28494845-28495003)
chr5 (72-162)||(22651767-22651857)
chr5 (51-99)||(13557055-13557103)
chr5 (51-99)||(17260389-17260438)
chr5 (21-120)||(20266320-20266419)
[»] chr2 (50 HSPs)
chr2 (1-162)||(38008336-38008497)
chr2 (1-162)||(6949451-6949613)
chr2 (1-162)||(11539637-11539799)
chr2 (3-162)||(43160397-43160557)
chr2 (1-162)||(33920996-33921158)
chr2 (1-162)||(4809264-4809425)
chr2 (1-156)||(13315499-13315658)
chr2 (1-171)||(20127727-20127898)
chr2 (1-162)||(62957-63118)
chr2 (1-162)||(4356141-4356302)
chr2 (1-163)||(42192239-42192401)
chr2 (1-162)||(16952935-16953098)
chr2 (1-162)||(17060906-17061069)
chr2 (1-162)||(11540023-11540184)
chr2 (1-162)||(20128122-20128283)
chr2 (1-162)||(44219644-44219805)
chr2 (1-161)||(16953319-16953479)
chr2 (3-162)||(38007950-38008110)
chr2 (1-162)||(42192627-42192789)
chr2 (1-156)||(16175734-16175890)
chr2 (3-162)||(13399807-13399965)
chr2 (1-163)||(4355754-4355916)
chr2 (1-162)||(43216094-43216255)
chr2 (13-156)||(15551071-15551215)
chr2 (52-162)||(5560051-5560161)
chr2 (1-103)||(13399481-13399583)
chr2 (12-173)||(649516-649677)
chr2 (1-137)||(4808904-4809040)
chr2 (1-156)||(15550679-15550835)
chr2 (1-156)||(33920618-33920773)
chr2 (1-162)||(32418159-32418318)
chr2 (30-162)||(32418560-32418692)
chr2 (28-162)||(44220055-44220191)
chr2 (1-89)||(5560935-5561023)
chr2 (1-162)||(24140064-24140220)
chr2 (1-156)||(43160015-43160171)
chr2 (22-163)||(6949848-6949991)
chr2 (1-149)||(63343-63497)
chr2 (4-162)||(31797166-31797323)
chr2 (1-156)||(9330179-9330335)
chr2 (80-156)||(649801-649877)
chr2 (2-162)||(28143416-28143575)
chr2 (51-162)||(25336034-25336146)
chr2 (2-162)||(14942230-14942392)
chr2 (54-120)||(5035905-5035972)
chr2 (1-66)||(43215805-43215870)
chr2 (1-101)||(22445699-22445801)
chr2 (100-156)||(9329918-9329974)
chr2 (5-63)||(9329980-9330038)
chr2 (88-156)||(3822927-3822995)
[»] chr3 (67 HSPs)
chr3 (1-162)||(38535309-38535470)
chr3 (1-156)||(49951552-49951707)
chr3 (1-162)||(41998229-41998391)
chr3 (1-163)||(43678294-43678456)
chr3 (1-156)||(32730774-32730929)
chr3 (1-156)||(55389611-55389766)
chr3 (22-162)||(49720767-49720907)
chr3 (1-156)||(51473240-51473396)
chr3 (1-164)||(50662797-50662960)
chr3 (1-156)||(44676857-44677012)
chr3 (1-163)||(51828342-51828505)
chr3 (22-156)||(329852-329986)
chr3 (1-162)||(47431696-47431858)
chr3 (1-163)||(51828925-51829087)
chr3 (1-162)||(55389982-55390143)
chr3 (3-162)||(330223-330382)
chr3 (1-156)||(40839037-40839192)
chr3 (1-162)||(16701174-16701338)
chr3 (1-161)||(46013807-46013968)
chr3 (1-162)||(52375716-52375877)
chr3 (1-162)||(2051295-2051460)
chr3 (1-156)||(52237202-52237357)
chr3 (1-162)||(25534890-25535052)
chr3 (1-162)||(34104638-34104798)
chr3 (1-162)||(51827957-51828118)
chr3 (1-156)||(40838658-40838813)
chr3 (1-163)||(40275479-40275640)
chr3 (1-163)||(44676471-44676633)
chr3 (1-163)||(52375326-52375488)
chr3 (1-162)||(51472855-51473016)
chr3 (1-162)||(14654199-14654352)
chr3 (1-156)||(32730395-32730550)
chr3 (1-164)||(43678669-43678832)
chr3 (1-164)||(40275091-40275256)
chr3 (1-163)||(49951931-49952093)
chr3 (1-156)||(22370602-22370758)
chr3 (1-156)||(30513728-30513883)
chr3 (1-156)||(52236822-52236977)
chr3 (1-162)||(51828539-51828701)
chr3 (1-162)||(2044271-2044432)
chr3 (1-162)||(38535680-38535841)
chr3 (1-162)||(46013422-46013583)
chr3 (1-162)||(49720371-49720532)
chr3 (1-162)||(14654576-14654735)
chr3 (23-156)||(16689364-16689497)
chr3 (1-156)||(34105033-34105190)
chr3 (1-162)||(39010075-39010235)
chr3 (2-156)||(36701482-36701636)
chr3 (2-162)||(50900914-50901073)
chr3 (30-162)||(41998643-41998774)
chr3 (2-163)||(55192117-55192277)
chr3 (51-149)||(39010457-39010554)
chr3 (2-162)||(27200078-27200237)
chr3 (2-162)||(49407796-49407955)
chr3 (1-103)||(43222449-43222551)
chr3 (1-153)||(43222774-43222927)
chr3 (2-161)||(37075687-37075848)
chr3 (2-161)||(49408169-49408326)
chr3 (48-161)||(37076106-37076219)
chr3 (2-99)||(37847206-37847302)
chr3 (52-156)||(27199708-27199813)
chr3 (2-120)||(8873732-8873850)
chr3 (2-103)||(8874072-8874173)
chr3 (63-162)||(36701106-36701206)
chr3 (71-162)||(33412609-33412700)
chr3 (48-163)||(12141122-12141238)
chr3 (51-125)||(50900569-50900644)
[»] chr8 (35 HSPs)
chr8 (30-162)||(41260271-41260403)
chr8 (1-162)||(15256213-15256377)
chr8 (3-156)||(18049596-18049750)
chr8 (1-156)||(18428146-18428302)
chr8 (1-162)||(34799079-34799241)
chr8 (1-162)||(599883-600044)
chr8 (1-162)||(16578481-16578642)
chr8 (1-156)||(9797111-9797267)
chr8 (1-163)||(9796725-9796887)
chr8 (1-162)||(5730817-5730978)
chr8 (1-156)||(28254431-28254587)
chr8 (22-162)||(15255853-15255993)
chr8 (1-161)||(28254811-28254971)
chr8 (1-162)||(35427197-35427358)
chr8 (1-161)||(42035773-42035933)
chr8 (1-163)||(7911001-7911163)
chr8 (1-162)||(599532-599693)
chr8 (1-162)||(34799468-34799629)
chr8 (1-156)||(35694255-35694418)
chr8 (13-156)||(2208720-2208864)
chr8 (1-103)||(41260646-41260748)
chr8 (3-156)||(18049978-18050131)
chr8 (1-137)||(5731197-5731333)
chr8 (1-108)||(26252863-26252970)
chr8 (28-162)||(16578108-16578242)
chr8 (1-90)||(35426885-35426974)
chr8 (1-162)||(6115495-6115657)
chr8 (1-161)||(35693869-35694031)
chr8 (1-103)||(42036156-42036259)
chr8 (1-162)||(7910616-7910778)
chr8 (54-103)||(18674207-18674256)
chr8 (2-156)||(18805170-18805322)
chr8 (51-156)||(28877324-28877429)
chr8 (110-156)||(35426848-35426894)
chr8 (1-45)||(35163815-35163859)
[»] chr6 (21 HSPs)
chr6 (1-172)||(5114458-5114629)
chr6 (1-156)||(24640570-24640725)
chr6 (1-163)||(25472397-25472560)
chr6 (3-162)||(5120856-5121015)
chr6 (1-162)||(29891465-29891630)
chr6 (1-162)||(30251076-30251238)
chr6 (1-164)||(31073527-31073690)
chr6 (1-162)||(31573720-31573886)
chr6 (1-171)||(31574110-31574280)
chr6 (3-156)||(25468855-25469010)
chr6 (1-89)||(28636581-28636669)
chr6 (28-169)||(31073136-31073284)
chr6 (18-103)||(28636351-28636435)
chr6 (1-162)||(29891080-29891241)
chr6 (2-162)||(35163572-35163733)
chr6 (51-163)||(32836431-32836543)
chr6 (1-79)||(30250774-30250852)
chr6 (17-120)||(33095756-33095859)
chr6 (51-156)||(35163190-35163295)
chr6 (1-99)||(11523747-11523846)
chr6 (16-163)||(33096007-33096158)
[»] chr1 (53 HSPs)
chr1 (1-156)||(34555765-34555922)
chr1 (1-156)||(21938569-21938724)
chr1 (1-162)||(9992154-9992316)
chr1 (1-162)||(37505067-37505229)
chr1 (3-156)||(50305169-50305325)
chr1 (3-163)||(9992542-9992702)
chr1 (1-161)||(44954611-44954771)
chr1 (1-162)||(30786771-30786933)
chr1 (1-162)||(52335895-52336056)
chr1 (1-163)||(10278935-10279094)
chr1 (1-162)||(16299067-16299227)
chr1 (1-162)||(1837505-1837666)
chr1 (1-162)||(2868093-2868254)
chr1 (1-156)||(44954232-44954387)
chr1 (1-103)||(8230026-8230128)
chr1 (1-163)||(23340182-23340344)
chr1 (1-156)||(44582442-44582599)
chr1 (1-156)||(17641749-17641909)
chr1 (1-162)||(34555379-34555542)
chr1 (1-156)||(4080027-4080182)
chr1 (1-156)||(37421166-37421323)
chr1 (1-156)||(10278554-10278710)
chr1 (1-156)||(2867917-2868072)
chr1 (1-156)||(44582063-44582218)
chr1 (1-103)||(443936-444038)
chr1 (1-156)||(6224703-6224860)
chr1 (22-152)||(29439327-29439458)
chr1 (30-161)||(16298683-16298814)
chr1 (1-120)||(17641407-17641526)
chr1 (58-171)||(37421386-37421500)
chr1 (2-156)||(39485071-39485224)
chr1 (1-162)||(8229637-8229801)
chr1 (37-162)||(29438930-29439056)
chr1 (1-163)||(37505453-37505614)
chr1 (2-156)||(45048161-45048314)
chr1 (63-162)||(30787245-30787344)
chr1 (1-162)||(50926626-50926787)
chr1 (1-90)||(1744398-1744488)
chr1 (5-155)||(23526665-23526815)
chr1 (1-125)||(29020917-29021041)
chr1 (13-99)||(9833549-9833635)
chr1 (69-156)||(50304445-50304532)
chr1 (4-162)||(29021252-29021411)
chr1 (3-68)||(50304876-50304941)
chr1 (2-162)||(17088526-17088685)
chr1 (6-125)||(44291701-44291820)
chr1 (13-156)||(45048533-45048675)
chr1 (1-68)||(30787157-30787224)
chr1 (1-156)||(50926236-50926393)
chr1 (22-125)||(23526936-23527039)
chr1 (52-162)||(44802606-44802717)
chr1 (2-68)||(17088245-17088310)
chr1 (55-152)||(25274766-25274863)
[»] scaffold0712 (2 HSPs)
scaffold0712 (3-164)||(6390-6551)
scaffold0712 (1-103)||(6776-6883)
[»] scaffold0709 (2 HSPs)
scaffold0709 (3-164)||(6408-6569)
scaffold0709 (1-103)||(6794-6901)
[»] scaffold0097 (2 HSPs)
scaffold0097 (12-162)||(46663-46814)
scaffold0097 (1-162)||(46266-46428)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-84)||(78395-78478)
[»] scaffold0007 (2 HSPs)
scaffold0007 (2-156)||(205754-205907)
scaffold0007 (72-162)||(210793-210883)
[»] scaffold1432 (1 HSPs)
scaffold1432 (55-162)||(504-611)
[»] scaffold0021 (1 HSPs)
scaffold0021 (17-125)||(159282-159390)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 170 - 346
Target Start/End: Complemental strand, 15130117 - 15129941
Alignment:
Q  170 tatgttataaaactcatgggaaattaatcagaatcaactctaaattaatgaactaatatgctcataagtaaaatgtttattagaataaacatgtaaatat 269  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15130117 tatgttagaaaactcatgggaaattaatcagaatcaactataaattaatgaagtaatatgctcataagtaaaatgtttattagaataaacatgtaaatat 15130018  T
Q  270 atttaatatgttgtatgtatttatttattttcttctaccaagtatgtaacttatttaggaatcatatgtcaaaatca 346  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15130017 atttaatatgttgtatgtatttatttattttcttctactaagtatgtaacttatttaggaatcatatgtcaaaatca 15129941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 9181693 - 9181538
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9181693 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacgattttgttcgattta 9181594  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| |||||| || |||||||||||||||||||||||||    
T  9181593 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 9181538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25637583 - 25637738
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637583 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 25637682  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| |||||| || |||||||||||||||||||||||||    
T  25637683 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 25637738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 7732884 - 7733043
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattgga 112  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7732884 atttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 7732983  T
Q  113 ccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatctttttat 172  Q
     ||||||| |||||| || ||||||||||||||||||||||||| ||||| | |||||||    
T  7732984 tcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccttttttttat 7733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 48247976 - 48248138
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48247976 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| ||||||||||  |||||| || ||||||||||||||||||||||||| |||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 48248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15712526 - 15712366
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  15712526 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaatatatagtttaaggacgattttgttcgattta 15712427  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| ||||    
T  15712426 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16081460 - 16081299
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||  ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16081460 actaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaacaaatagtttaaggacgattttgttcgattta 16081361  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||| |||||||| || ||||| | ||||||||||||||||| |||||    
T  16081360 aaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagcc 16081299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5745800 - 5745645
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  5745800 actaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacatatagtttaagaaagattttgttcgattta 5745701  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  |||||||||| |||||| || |||||| ||||||||||||||||||    
T  5745700 aaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaat 5745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14311672 - 14311827
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14311672 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaagacgattttgttcgattta 14311771  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||  |||||| || ||| ||||| ||| |||||||||||    
T  14311772 aaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaat 14311827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26026703 - 26026858
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  26026703 actaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacatatagtttaaggatggttttgttcgattta 26026802  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
     ||||||| ||||||||||| ||| || || ||||| |||||||||||||||||||    
T  26026803 taaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaat 26026858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 786944 - 786782
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  786944 actaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattt 786845  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||| |  |||||||||| |||||| || ||||||| |||| |||||||||||| |||||    
T  786844 aaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagcc 786782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7732649 - 7732488
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7732649 actaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 7732550  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| ||||||  | ||||||  |||||||||| |||||| |||||    
T  7732549 aaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagcc 7732488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 27245601 - 27245744
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattgga 112  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  27245601 atttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacatataatttaaggacgattttgttcgatttaaaaaagatagga 27245700  T
Q  113 ccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||  | ||||||||| |||||||||| ||||    
T  27245701 ccattttcgtgagttgatcaaaatggtaagaccaaaagtataat 27245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 28687750 - 28687592
Alignment:
Q  5 aaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaa 104  Q
    |||||| ||||| ||||| ||| |||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| |||    
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaa 28687651  T
Q  105 agattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||| | ||||||||| |||||| || |||||| || ||||||||||||||| ||||||    
T  28687650 agatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagcca 28687592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 16917833 - 16917713
Alignment:
Q  42 gggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtag 141  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||| || ||||||||||    
T  16917833 gggagatatgactaaaactgcaaaaaacatatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtag 16917734  T
Q  142 gaccaaaagtgtaatgaagcc 162  Q
    ||||||||||||||| |||||    
T  16917733 gaccaaaagtgtaattaagcc 16917713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16081684 - 16081845
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16081684 actaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggatgattttgttcgattta 16081783  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||| || |||| |||||| || ||||||  ||||||||| ||||||| |||||    
T  16081784 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagcc 16081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11971499 - 11971334
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactg----caaaaaacatatagtttaaggacgattttgttcga 96  Q
    |||||||||| ||||| ||||  ||| | || ||||||||||||||||| |||||||||||     ||||||||||||||||||||||||||||||||||    
T  11971499 actaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaaggacgattttgttcga 11971400  T
Q  97 tttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||||| ||||||||||| |||||  || |||||||||||||||||||| |||| |||||    
T  11971399 tttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagcc 11971334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 25637357 - 25637197
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || || | |||||| ||||||||||| || || |||  ||||||||||||||||| |||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagcc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26048332 - 26048494
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  26048332 actaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgc-aaaaacatatagtttaaggacaattttgtttgattta 26048430  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    ||| || | |||||| |||| |||||| || |||| |  |||| |||||||||||| |||||||    
T  26048431 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagccat 26048494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 35161197 - 35161342
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagattg 110  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || | |    
T  35161197 catttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtag 35161296  T
Q  111 gaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| || | |||||| || ||||||  |||||||||||||||||    
T  35161297 gaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26026479 - 26026323
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  26026479 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || |  ||||| |||| |||| | || |||||   |||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaat 26026323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27245365 - 27245202
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||  ||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| ||||| ||||  |||||||||||||||||||    
T  27245365 actaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgattt 27245266  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| ||||||    
T  27245265 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcca 27245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 5334020 - 5333880
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    ||||| |||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||||||||     
T  5334020 catttctggagtaggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcg 5333921  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || ||||||  |||| |||||||||||| |||||    
T  5333920 tgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 5333880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28687884 - 28688032
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28687884 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacatatagtttagggacgattttgttcgattta 28687983  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||| || |  || || |||| |||||| || ||||||  ||||||||||    
T  28687984 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa 28688032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2758083 - 2758244
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| | ||| ||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  2758083 actaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacatatagtttatggacgattttgttcgattta 2758182  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | | ||||||||| ||||||    ||||||  ||||||||||||||||| |||||    
T  2758183 aaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagcc 2758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5746024 - 5746186
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc--aaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||| ||||||||||||    
T  5746024 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatt 5746123  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| ||    || || |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  5746124 taaaagag-gcagatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 5746186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 48247752 - 48247587
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa----aaaacatatagtttaaggacgattttgttcga 96  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    |||| ||||| |||| ||||||||||||| ||    
T  48247752 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttga 48247653  T
Q  97 tttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||| || | |||||| |||| ||||||  | ||||||  ||||||||||||||||| |||||    
T  48247652 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 48247587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24929688 - 24929855
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaa-----acatatagtttaaggacgattttgttcg 95  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||     | |||||||||| ||||||||||||| |    
T  24929688 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttg 24929787  T
Q  96 atttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||||| || |  ||||| |||| |||||| || ||||||  |||||||||| |||||| ||||||    
T  24929788 atttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcca 24929855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39388651 - 39388813
Alignment:
Q  1 actaaaactgccatttct-gtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||| | |||| ||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||    
T  39388651 actaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatt 39388750  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||||| || | |||| | |||| |||||| || ||||||  ||||||||||||||||| ||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 9181794 - 9181958
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactg---caaaaaacatatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||    ||||||||||||||||| |||||||||||||||||    
T  9181794 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgat 9181893  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || |  || || |||| ||| || || ||||||  |||| |||||||||||| |||||    
T  9181894 ttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcc 9181958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 15129610 - 15129538
Alignment:
Q  359 ttttgattattatcatatcaattgtcatatgtaattgttccaactttaactgactttcccatttgcagtcata 431  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15129610 tttttatttttatcatatcaattgtcatatgtaattgttccaactttaactgactttcccatttgcagtcata 15129538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34595157 - 34595318
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |||||||| ||||| || | ||  ||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  34595157 actaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgc-aaaaacatgatagtttagggacgattttgttcgattt 34595255  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| |    ||||||||||| |||||| || ||||||  ||||||||||||||||| |||||    
T  34595256 aaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 34595318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 5334254 - 5334359
Alignment:
Q  51 gactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaag 150  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||| || | |||| |||||| |||||| || ||||||  |||||||||||    
T  5334254 gactaaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaag 5334353  T
Q  151 tgtaat 156  Q
    ||||||    
T  5334354 tgtaat 5334359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 9394117 - 9394274
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||  ||| || ||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||| |    
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaatatatagtttagggacggttttgttcgatttga 9394215  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||||| | ||||||||||  |||| | || ||||||  | ||||||||||||||| ||||    
T  9394216 aaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaagc 9394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 787167 - 787326
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaa----aaacatatagtttaaggacgattttgttcga 96  Q
    |||||||||  ||||| ||||| ||| |||||||| ||||| | |||||||||||||||| ||||    ||||| |||||||| ||||||||||||||||    
T  787167 actaaaactatcatttatgtgcgtttctggagttgaaaatatgaagataagactaaaactacaaattaaaaacaaatagtttagggacgattttgttcga 787266  T
Q  97 tttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||| || | ||||||||||| |||||| || |||||   || ||||||||||||||    
T  787267 tttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaat 787326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 14311477 - 14311340
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactg-caaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||| || ||||||||  ||||||||||||||||| |||||||||| ||| ||||    
T  14311477 actaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaattt 14311378  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatg 137  Q
    |||| || |   |||| ||| ||||||| |||||||||    
T  14311377 aaaagaggtataaccaattttatgagttggttaaaatg 14311340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11973787 - 11973942
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| || ||||||||||||| |||||  |||||||||||||||| ||| || |||| |||||||||||||| |||||    
T  11973787 actaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacgattttgttcaattta 11973886  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | | |||| |||| |  ||| || ||||||  |||||||||| ||||||    
T  11973887 aaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaat 11973942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26048109 - 26047963
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| ||| |     |||     |||||||||||||||||||| ||||| |||||||||    
T  26048109 actaaaactgtcatttctgtgcgtttctggagttggaaatagggacataggc----aac-----aaaacatatagtttaaggacaattttattcgattta 26048019  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  |||||||||| |||||| ||  ||||||||| | ||||||||||||    
T  26048018 aaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaat 26047963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 5184544 - 5184488
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa 68  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  5184544 catttctgtgcatttttggagttggaaatagggagataagactaaaattgtaaaaaa 5184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33880970 - 33881076
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc--aaaaaacat-atagtttaaggac--gattttgttcg 95  Q
    |||||||||| ||||| ||||| ||| |||||||| |||||||| |||||||||||||||||  ||||||||| |||||||| ||||  |||||||||||    
T  33880970 actaaaactgtcatttatgtgcgtttctggagttgaaaataggg-gataagactaaaactgcaaaaaaaacatgatagtttatggacgagattttgttcg 33881068  T
Q  96 atttaaaa 103  Q
    ||| ||||    
T  33881069 attgaaaa 33881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 35160746 - 35160660
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaaga--ttggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaa 155  Q
    |||| |||||| ||||||| ||||||||||||||| |  |  |||||||||| |||||| || ||||||||||||||||||||||||    
T  35160746 tataatttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 4477860 - 4477701
Alignment:
Q  4 aaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaa 102  Q
    ||||||| ||||||  ||| ||| ||||||| ||||   |||| || ||||||||||||||||| ||| |||||||| |||||||||| ||| |||||||    
T  4477860 aaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaa-catgatagtttagggacgattttattcaatttaaa 4477762  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    | ||   ||||||||||| ||| || || ||||||  |||| ||| |||||||| ||||||    
T  4477761 agaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagcca 4477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 39136776 - 39136686
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||||||||||| ||| ||   | ||||||||| |||| | || ||||||  |||| |||||||||||| |||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagcc 39136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 45815457 - 45815344
Alignment:
Q  48 taagactaaaactgcaa-aaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggacc 145  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||| ||    ||||||||||   || | || ||||||  ||||||    
T  45815457 taagactaaaactgcaaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggacc 45815361  T
Q  146 aaaagtgtaatgaagcc 162  Q
    ||||||||||| |||||    
T  45815360 aaaagtgtaattaagcc 45815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 9393894 - 9393799
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||| ||||||  ||  ||| |||||||| ||||||| || || ||||||||| ||||||||||| ||||||| |||||| |||||||||||||    
T  9393894 taaaactgtcatttcactgtgtttctggagttgaaaatagg-aggtaggactaaaacagcaaaaaacatgatagttt-aggacggttttgttcgattt 9393799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 45815501 - 45815553
Alignment:
Q  52 actaaaactgcaaaaaa-cat-atagtttaaggacgattttgttcgatttaaaa 103  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  45815501 actaaaactgcaaaaaaacatgatagttta-ggacgattttgttcgatttaaaa 45815553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 35160936 - 35160892
Alignment:
Q  28 tggagttggaaatagggagataagactaaaactgcaaaaaacata 72  Q
    |||||||| ||||||||||||| |||||||| | |||||||||||    
T  35160936 tggagttgaaaatagggagataggactaaaattacaaaaaacata 35160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 39136991 - 39137079
Alignment:
Q  74 agtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| ||||||||||||||||||||||| ||   ||||||||||| ||||   || |||||   |||| |||||||||||| |||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcc 39137079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28465466 - 28465628
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28465466 actaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 28465565  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  28465566 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 28465628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21034397 - 21034234
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  21034397 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 21034298  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  21034297 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 21034234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26974445 - 26974283
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  26974445 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 26974346  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||  |||||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  26974345 aaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagcc 26974283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34789543 - 34789381
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789543 actaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 34789444  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  34789443 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 34789381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14440213 - 14440374
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14440213 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggatgattttgttcgattta 14440312  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||| | |||| || |||||||||||||||||||| |||| |||||    
T  14440313 aaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagcc 14440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 56077709 - 56077870
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56077709 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 56077808  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||  |||||||||| |||||| || |||||||||||||||||| |||||| |||||    
T  56077809 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 56077870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12593185 - 12593014
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12593185 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 12593086  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatctttttat 172  Q
    |||||| |  |||||||||| |||||| || ||| ||||||||||||||||||||| ||||| | |||||||    
T  12593085 aaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagccttgtttttat 12593014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 54440954 - 54441109
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||   |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54440954 actaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 54441053  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| |||| |  | |||||||||||||||||||||||||    
T  54441054 aaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaat 54441109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 45838932 - 45839089
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||||||||||||||||||    
T  45838932 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||| |||||| |||| |||||| || ||||| |||||||||||||||||||    
T  45839032 ttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaat 45839089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 41114320 - 41114166
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| || ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41114320 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatt 41114221  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgt 153  Q
    |||||||||| ||||| ||||| |||||| || ||||||||||||||||||||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgt 41114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46737040 - 46737201
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46737040 actaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 46737139  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  46737140 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 46737201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 28166163 - 28166017
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||  ||||||||||| ||| || ||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28166163 taaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacaattttgttcgatttaaa 28166064  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    |||||| ||||||||||| |||||| || ||||| ||||||||||||    
T  28166063 aaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaa 28166017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46736816 - 46736655
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||| ||||||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||    
T  46736816 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaacatatagtttaaggacaattttgttcgattta 46736717  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| ||  |||||||||| |||||| || ||||| |||| ||||||||| |||| |||||    
T  46736716 aaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagcc 46736655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14439989 - 14439834
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||    
T  14439989 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgtttaattta 14439890  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| |  ||||| |||| |||||| || ||||||  |||||||||| ||||||    
T  14439889 aaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaat 14439834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28465242 - 28465087
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465242 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28465143  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | ||| || |||| | |||| || ||||||| ||||| |||||||||||    
T  28465142 aaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaat 28465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36168716 - 36168877
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||| |  ||||||||| |||||    
T  36168716 actaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaacatataatttaagaataattttgttctattta 36168815  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || ||| ||||||| |||||| || |||||||||||||||| |||||||| |||||    
T  36168816 aaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaagcc 36168877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34789767 - 34789923
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  34789767 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattt 34789866  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || | |||||| |||| |||||| || ||||||  |||||||||||||||||    
T  34789867 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaat 34789923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54440730 - 54440577
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  54440730 actaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaaac--atagtttagggacgattttgttcgattta 54440633  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | |||||| |||| |||||| || ||||||  |||||||||||||||||    
T  54440632 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaat 54440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34807524 - 34807631
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34807524 actaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacatatagtttaaggacgattttgttcgaatta 34807623  T
Q  101 aaaaagat 108  Q
    ||||||||    
T  34807624 aaaaagat 34807631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19529031 - 19528869
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattt 19528932  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | |||||| |||| ||| || || ||||||  ||||||||||||||||| |||||    
T  19528931 aaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcc 19528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12593408 - 12593569
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  12593408 actaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaatatatagtttacagacgattttgttcgattta 12593507  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  ||||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  12593508 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 12593569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33689989 - 33689829
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||| |||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33689989 actaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa-catatagtttaaggacgattttgttcgattta 33689891  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||  |||||| || ||||||  ||||||||||||||||| |||||    
T  33689890 aaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 33689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55677342 - 55677504
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| || |||| |||||||||||||  ||||||||||||||||||    
T  55677342 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattt 55677441  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | |||||| |||| |||||| || |||||   ||||||||||||||||| |||||    
T  55677442 aaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcc 55677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6616834 - 6616678
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||| ||| || |||||| || |||||||| |||||||||||||||||||||||||||||||    
T  6616834 actaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgattt 6616735  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| ||  |||||||||| ||||||  | |||||| ||| ||||||||||||||    
T  6616734 aaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaat 6616678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 45838697 - 45838554
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattgg 111  Q
    ||||||||||| ||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||    
T  45838697 catttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagg 45838598  T
Q  112 accattttcatgagttcgttaaaatggtaggaccaaaagtgtaa 155  Q
    |||| || | |||||| || |||||   ||||||||||||||||    
T  45838597 accaattacgtgagttggtcaaaatacaaggaccaaaagtgtaa 45838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 19529078 - 19529240
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |  ||||||||||| |||||||  ||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  19529078 actaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagacgattttgttcaattt 19529177  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| |||| | | |||||| || |||| || |||||||||||| |||||||||||| |||||    
T  19529178 aaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagcc 19529240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21034621 - 21034783
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaaca-tatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||  ||| ||||||||||||||||||||||  ||||||||||||||||| | ||||||| | |||||||||||||||||||    
T  21034621 actaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattt 21034720  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| |||| |||||| |||| |||||| || ||||||  |||||||||| |||||| |||||    
T  21034721 aaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcc 21034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 33777772 - 33777638
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    |||||||||||||| |||| | |||||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||  || |||||||     
T  33777772 catttatggagttgaaaatggagagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcg 33777673  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| || |||||||||||| ||||||||||||    
T  33777672 tgagttggtcaaaatggtaggaacaaaagtgtaat 33777638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34807278 - 34807116
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||| ||||||| |||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  34807278 actaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattt 34807179  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || |  ||||| |||| ||||||  | ||||||  ||||||||||||||||| |||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 34807116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24851850 - 24852006
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||  ||||||||||| ||| |||||||||||||||  ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  24851850 actaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 24851949  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || | ||| || |||| |||||| || ||||||  |||||||||||| ||||    
T  24851950 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataat 24852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 35643728 - 35643564
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa------------catatagtttaaggacgatt 88  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||            ||||||||||||||||||||    
T  35643728 actaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaaaaaaaaaaaaaaacatatagtttaaggacgatt 35643629  T
Q  89 ttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgt 153  Q
    || ||| |||| |||||||| ||||||||||| |||||| || ||||||||| |||||| |||||    
T  35643628 ttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgt 35643564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 33778018 - 33778152
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| | ||||||||||| ||||||||| || | | | |||||||     
T  33778018 catttatggagttggaaatagggagatagaactaaaactgcaaaaaacatataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcg 33778117  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| || |||||||||| || |||||||||||    
T  33778118 tgagttagtcaaaatggtagaacgaaaagtgtaat 33778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 41608536 - 41608380
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa---aaaacatatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||||||||| ||| || ||||||||||| ||||||| ||||||||||||||   ||||||||||||||  |||||||||||||||||    
T  41608536 actaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--ggacgattttgttcgat 41608439  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| || |  ||||| |||||||||||  | ||||||  |||||||||||||||||    
T  41608438 ttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaat 41608380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36168493 - 36168335
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcgat 97  Q
    |||| ||||| ||||| | ||| ||| ||||||| |||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||    
T  36168493 actataactgtcatttatatgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggacgattttgttcgat 36168394  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| || |  ||||| |||| || ||| || ||||||  |||| ||||||||||||    
T  36168393 ttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaat 36168335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 6617068 - 6617183
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||| || | |||||| ||||     
T  6617068 catttctggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcg 6617167  T
Q  122 tgagttcgttaaaatg 137  Q
    |||||| || ||||||    
T  6617168 tgagttagtcaaaatg 6617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 35193467 - 35193345
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||| ||| || ||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 35193369  T
Q  102 aaaagattggaccattttcatgag 125  Q
    || || | ||||||||||| ||||    
T  35193368 aagaggtaggaccattttcgtgag 35193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16214880 - 16215035
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||  ||||| ||||  ||| |||||||| ||||||| |||||  | ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16214880 actaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaatatatagtttaaggacgattttattcaattta 16214979  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  || ||||||| | ||||  | |||||| ||||||||||||| ||||    
T  16214980 aaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataat 16215035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 24851407 - 24851316
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||| || |||||||||||| |||||||||||| |||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcc 24851316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 1397683 - 1397601
Alignment:
Q  74 agtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||| ||| ||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaat 1397601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 17504345 - 17504468
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||| ||| | |||||| |||   |||| ||  ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  17504345 ctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaaacatatagtttaaggacggttttgttcgatttaa 17504444  T
Q  102 aaaagattggaccattttcatgag 125  Q
    || |||| ||||||||||| ||||    
T  17504445 aagagataggaccattttcgtgag 17504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24851626 - 24851559
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa 68  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24851626 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaa 24851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 26974662 - 26974785
Alignment:
Q  34 tggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgtta 132  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||| || | |||||| |||| ||| ||  | |    
T  26974662 tggaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattca 26974761  T
Q  133 aaatggtaggaccaaaagtgtaat 156  Q
    |||||  |||||||||| ||||||    
T  26974762 aaatgcaaggaccaaaaatgtaat 26974785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 41608870 - 41608961
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||||| ||||||||||| ||||||||| || | |||||| |||| |||||| || ||||||||||||||||||||||||| |||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 41608961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 40160231 - 40160153
Alignment:
Q  24 tttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    ||||| |||||| ||||||| || || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  40160231 tttatagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttaaaa 40160153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 229544 - 229699
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||| || || |||||||| ||| |||||||| ||||| |||| || || ||||||||| |||||||| |||||||||||||||||||||| |||||    
T  229544 actaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgc-aaaaacatgatagtttaaggacgattttgtttgattt 229642  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
     ||| ||    |||||||||| |||| | || ||||||  | |||||||||||||||    
T  229643 gaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaat 229699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 35643970 - 35644014
Alignment:
Q  28 tggagttggaaatagggagataagactaaaactgcaaaaaacata 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35643970 tggagttggaaatagggagataagactaaaactgcaaaaaacata 35644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18965301 - 18965141
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| | ||| ||| | |||||| ||||| |||| ||  |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18965301 actaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcgattt 18965203  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
     ||| ||    |||| ||||| |||||  |||||||||  |||| ||||| |||||| ||||    
T  18965202 gaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaagc 18965141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 23986632 - 23986521
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||||||||||||||| |||||||| ||||  ||||||||||||| ||| |||   |||||||||| |||| | || ||||||  ||||||||||    
T  23986632 gactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaa 23986533  T
Q  150 gtgtaatgaagc 161  Q
    ||| ||| ||||    
T  23986532 gtgaaattaagc 23986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 40160477 - 40160630
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||||  ||||| | | ||| |||||||| ||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||| ||||     
T  40160477 ctaaaactgcattttctctacgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttt-aggacggttttgttcaatttg 40160574  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| ||    ||| |||||| |||||| || ||||||  |||||||||| ||||||    
T  40160575 aaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaat 40160630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 229322 - 229167
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaata-gggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatt 98  Q
    |||||||||| || || ||||| |||||||||||| ||||| ||||| ||  |||||||||||||||| ||| ||||||||||||||||||||||| |||    
T  229322 actaaaactgtcacttttgtgcgtttatggagttgaaaataagggag-tagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcaatt 229225  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    | ||| ||    ||||||||||  ||| | || |||||   |||||||||||||||||    
T  229224 tgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaat 229167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 17504133 - 17503974
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||| ||||||| | | ||| |||||||| ||||||| || || ||||||||||||||||||||| ||||||| |||||| || ||||| ||||     
T  17504133 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttt-aggacggttatgttccatttg 17504036  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| ||   ||||||||||| |||| | || ||||||  |||||||| ||| |||| |||||    
T  17504035 aaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcc 17503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 35193691 - 35193848
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||||||| || ||| ||| |||||||| ||||||| || || |||||||||  |||||||||| |||||||| ||||| ||||||| ||||| |    
T  35193691 taaaactgccatt-ctctgcgtttctggagttgaaaatagg-aggtatgactaaaacatcaaaaaacatgatagttta-ggacggttttgttagatttga 35193787  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||   ||||||||||| |||| |  | ||||||  ||||||||||||||||| |||||    
T  35193788 aagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagcc 35193848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18965521 - 18965614
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 94  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||   || |||||||||| | |||||||| |||||||| | ||||||||||||    
T  18965521 actaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaactac-aaaaacatgatagtttaggaacgattttgttc 18965614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24336148 - 24336303
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||| ||||||||||| | | ||| |||||||| ||||| || | || ||||||||  ||||||||||| ||| |||| | ||| |||||||||||||    
T  24336148 actaaagctgccatttctatacgtttctggagttgaaaatatgggg-taggactaaaagagcaaaaaacatgataatttaggaacggttttgttcgattt 24336246  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
     ||| ||   ||||||||||| |||| | || ||||||  |||| ||||||||||||    
T  24336247 gaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaat 24336303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 30597958 - 30598066
Alignment:
Q  55 aaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgta 154  Q
    |||| ||||| ||| ||||| |||| ||||||||||||||||||||||| |||  | |||| || | |||||| || ||||    |||||||||||||||    
T  30597958 aaaagtgcaacaaaaatataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgta 30598057  T
Q  155 atgaagcca 163  Q
    || ||||||    
T  30598058 atcaagcca 30598066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 44219448 - 44219381
Alignment:
Q  89 ttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| ||||||||||||  |||||| |||| |||||| ||||||||   |||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaat 44219381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 51309939 - 51310051
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||| | ||||||||| |||||||| ||||  ||||||||||||| ||| ||    |||||||||| |||| | || ||||||  ||||||||||    
T  51309939 gactaaaaccgtaaaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaa 51310038  T
Q  150 gtgtaatgaagcc 162  Q
    ||| ||| |||||    
T  51310039 gtgcaattaagcc 51310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28290029 - 28290190
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290029 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28290128  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| ||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  28290129 aaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 28290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19291518 - 19291355
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19291518 actaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 19291419  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||||||||| ||||||||||  ||||||  | ||||| ||||||||||||||||||| ||||||    
T  19291418 aaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagcca 19291355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 18149873 - 18149733
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  18149873 catttatggagttggaaatagggaaataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 18149774  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| ||  ||||||||||| |||||||||||| |||||    
T  18149773 tgagttggtccaaatggtaggatcaaaagtgtaattaagcc 18149733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 8419008 - 8419165
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||| || ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-atatagtttaaggacgattttgttcaatttaaa 8419106  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    |||||| ||||||| ||| |||||| || ||||||||||||||||||||||||| ||||    
T  8419107 aaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15029694 - 15029855
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15029694 actaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 15029793  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| |  |||||||||| |||||| || ||||||| ||||||||||||||||| |||||    
T  15029794 aaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagcc 15029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 38900800 - 38900650
Alignment:
Q  6 aactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaa 105  Q
    ||||| ||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |    
T  38900800 aactgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaaga 38900701  T
Q  106 gattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    | | ||| ||||||| |||||| || ||||||  |||||||||||||||||    
T  38900700 ggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 38900650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21371081 - 21371242
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  21371081 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttagggacgattttgtttgattta 21371180  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| ||| ||||||| || ||||||  |||| |||||||||||| |||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 21371242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38901027 - 38901187
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||  ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38901027 actaaaactgtcatttatgtgcgtttctgg--ttggaaataaggagatataactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38901124  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||| | | ||||||||||| ||  || || ||||||| ||||||||||||||||| ||||||    
T  38901125 aaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagcca 38901187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28289845 - 28289684
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  28289845 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacatataatttagggacgattttgttcgattta 28289746  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  ||| | |||| |||||| || ||||||  |||| |||||||||||| |||||    
T  28289745 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 28289684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15115480 - 15115638
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | ||||||||||||||| |||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  15115480 actaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaaa---tatagtttaaggacgattttgttcgattta 15115576  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||||||||||| |||||| || ||||||  |||| |||||||||||| |||||    
T  15115577 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagcc 15115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 4966973 - 4966822
Alignment:
Q  4 aaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    ||||||| ||||||||||||||| | ||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  4966973 aaaactgtcatttctgtgcatttctagagttggaaataggg-gatatgactaaaactgctaaaaacatatagtttagggacgattttgttcgatttaaaa 4966875  T
Q  104 aagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
     ||   | || |||||| |||||| || ||||||  |||||||||||||||||    
T  4966874 gaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 4966822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39083521 - 39083372
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaa--acatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||  ||| |||||||||||||| ||||||| |||||||||||||||||  | |||||||||||| || |||||||||||||    
T  39083521 actaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaacaattttgttcgatt 39083422  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaa 148  Q
    ||||||| || ||||||||||| |||||| || |||||| ||||| ||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatcaaa 39083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18150108 - 18150270
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc-aaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||| | ||||| ||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  18150108 actaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 18150207  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | |||||| |||| |||||| || |||||   |||| || ||||||||| |||||    
T  18150208 aaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagcc 18150270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4967154 - 4967317
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa--aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||  ||||| ||||| ||| | ||||| |||||||||| ||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  4967154 actaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 4967253  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || |  |||||||||  |||||| || ||||||  ||||||||||||||||| |||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 4967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5161744 - 5161636
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||| ||| ||| || ||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||||    
T  5161744 actaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagacaattttgttcgattt 5161645  T
Q  100 aaaaaagat 108  Q
    |||||||||    
T  5161644 aaaaaagat 5161636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 32697619 - 32697771
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa---aacatatagtttaaggacgattttgttcgatttaaaaaagat 108  Q
    ||||||||||  ||| ||||||||||||||||||| ||  |||||||||||||||   ||||||||||||| |||||||| |||||||||||||| || |    
T  32697619 catttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttagggacgattctgttcgatttaaaagaggt 32697718  T
Q  109 tggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
     |||||| |||| |||||| || ||||||  | ||||||||||||||| ||||    
T  32697719 aggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 16752741 - 16752645
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||||  ||||||| ||| |||||||||||| ||||||| || || ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16752741 ctaaaactatcatttctttgcgtttatggagttgaaaatagg-aggtatgacaaaaactgcaaaaaacatatagtttatggacgattttgttcgattt 16752645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 27307220 - 27307061
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||| ||||||| ||| ||| |||||||| ||||||| || |||||||||||||||||||||||| ||||||| |||| |||||||||| ||||     
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttt-aggatgattttgttcaatttg 27307123  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| | |   |||||||||||| |||| || ||||||  || |||||||||||||| |||||    
T  27307122 aaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagcc 27307061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 10721945 - 10721787
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||| ||||||| | | ||| |||||||| ||||||| || || ||||||||||||||||||||| |||||||| |||||||||||||||||||     
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttg 10721848  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||| |||   |||||||||| |||| | || ||||||  |||||||||| |||||| ||||    
T  10721847 aaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14340792 - 14340950
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc---aaaaaacatatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||||| | | ||| |||||||||||||| ||||||| |||||||||| |   |||||| |||||||||| |||||||||||||||||    
T  14340792 actaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgattttgttcgat 14340891  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| |  |  ||||| |||| |||||| || ||||||  || ||||||| ||||||    
T  14340892 ttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaat 14340950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 14340478 - 14340404
Alignment:
Q  82 gacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||  | |||||||||||||||||| ||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaat 14340404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 21370828 - 21370699
Alignment:
Q  28 tggagttggaaatagggagataagactaaaactgcaaaaaacata--------tagtttaaggacgattttgttcgatttaaaaaagattggaccatttt 119  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||        |||||||| |||||||||||||||||||||||||||   ||||||||    
T  21370828 tggagttggaaatagggagataggactaaaattgcaaaaaaaataaaaaataatagtttaaagacgattttgttcgatttaaaaaagatataaccatttt 21370729  T
Q  120 catgagttcgttaaaatggtaggaccaaaa 149  Q
    | | |||| || ||||| ||||||| ||||    
T  21370728 cgtcagttggtcaaaatagtaggacaaaaa 21370699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22651506 - 22651404
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||||||||||| ||||| ||| |||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||||| | ||||||| |||||    
T  22651506 actaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgca-aaaacatgatagtttaaggatggttttgtttgattt 22651408  T
Q  100 aaaa 103  Q
    ||||    
T  22651407 aaaa 22651404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 5161974 - 5162056
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    ||||| || ||||| |||| |||||||| |||||||| ||||||| |||||||| |||| |||||||||||||||||||||||    
T  5161974 catttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaa 5162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 27307444 - 27307543
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa---aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||| || ||||||| ||||||| |||||||| ||||||| || || |||||||||| |||||   ||||||||||||| ||||| ||||||||||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggagttgaaaatagg-aggtaggactaaaactacaaaaaaaaacatatagtttatggacggttttgttcgatt 27307542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 32305977 - 32305877
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||| ||||||| ||  ||| |||||||| ||||| | || || ||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattta 32305880  T
Q  101 aaa 103  Q
    |||    
T  32305879 aaa 32305877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 41834445 - 41834605
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-cat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||| ||||||| ||| |||   |||||| ||||||| || || |||||||||||||||||| ||| |||||||| ||||| ||||||||||| |    
T  41834445 ctaaaactgtcatttctctgcgtttcaagagttgaaaatagg-aggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatct 41834542  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
     ||| ||   ||||||||||| |||| | || ||||||  ||||||||||||||||| |||||    
T  41834543 gaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 41834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 28495003 - 28494845
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    |||||| || || |||| ||| ||| |||||||| ||||||| || || ||||||||||||||||||||| ||||||| |||||  |||||||||||||     
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttt-aggacagttttgttcgatttg 28494906  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||| ||   | ||||||||| |||  | || ||||||  ||||||||||||||||| ||||    
T  28494905 aaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagc 28494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 22651767 - 22651857
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||||||||||| ||||||   | ||||||||| |||| | || ||||||  ||||| ||||||||||| |||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagcc 22651857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 13557103 - 13557055
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  13557103 gactaaaactgcaaaaaacatgatagtttaa-gacgattttgtttgattt 13557055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 17260438 - 17260389
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||||||||||||||| ||| |||| |||| ||||||||||||||    
T  17260438 gactaaaactgcaaaaaacatgataatttatggacaattttgttcgattt 17260389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 20266320 - 20266419
Alignment:
Q  21 gcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccatttt 119  Q
    |||||| ||||| || |||||||| | || |||||||||| ||| || ||| |||||||| ||||||||||||||||||| ||| |||   |||||||||    
T  20266320 gcatttttggaggtgaaaataggggg-taggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccatttt 20266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38008336 - 38008497
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||  ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008336 actaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38008435  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  38008436 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38008497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6949613 - 6949451
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6949613 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattt 6949514  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| ||||||||||| |||||| || |||||| ||||||||||| |||||| |||||    
T  6949513 aaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagcc 6949451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11539799 - 11539637
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11539799 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 11539700  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  11539699 aaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 11539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 43160397 - 43160557
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||| ||||||||||| |||||| || |||||||||||||| |||||||||| |||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagcc 43160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33920996 - 33921158
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  33920996 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattt 33921095  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  33921096 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 33921158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4809264 - 4809425
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4809264 actaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgactttgttcaattta 4809363  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  4809364 aaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagcc 4809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 13315658 - 13315499
Alignment:
Q  1 actaaaactgccatttctgtgcattta-tggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcga 96  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  13315658 actaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcga 13315559  T
Q  97 tttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||||  ||||||||||||||||| || ||||||||||||| |||||||||||    
T  13315558 tttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaat 13315499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20127898 - 20127727
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| || ||||| ||||| ||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20127898 actaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 20127799  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatcttttta 171  Q
    ||||||||| ||||||||||| ||| || || ||||||||||||||||||||||||| ||||| | ||||||    
T  20127798 aaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagcctttttttta 20127727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 63118 - 62957
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  63118 actaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttt 63019  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| | ||||||||||| |||||| || ||||||| ||||||| ||||||||| |||||    
T  63018 aaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagcc 62957  T

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Target: chr2; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4356141 - 4356302
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  4356141 actaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 4356240  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||  ||||||| || |||||| || |||||| |||||||||||||||||| |||||    
T  4356241 aaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagcc 4356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42192401 - 42192239
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42192401 actaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 42192302  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || | ||||||||||| |||||| || ||||||  ||||||||||||||||| ||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcca 42192239  T

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Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16953098 - 16952935
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  16953098 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 16952999  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||||  ||| |||||| |||||| || |||||||||||||||||||| |||| |||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 16952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17061069 - 17060906
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  17061069 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 17060970  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||||  ||| |||||| |||||| || |||||||||||||||||||| |||| |||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 17060906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 11540023 - 11540184
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11540023 actaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 11540122  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||||||||||| |||||| || ||||||  | |||||||||| |||| |||||    
T  11540123 aaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcc 11540184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20128122 - 20128283
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  20128122 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgtttgattta 20128221  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  20128222 aaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcc 20128283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44219805 - 44219644
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  44219805 actaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacatataatttaaggacaattttgttcgattta 44219706  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| | ||| ||||||  ||||||  | ||||||| ||||||||||||||||| |||||    
T  44219705 aaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagcc 44219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16953319 - 16953479
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||||||||    
T  16953319 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacatttttgttcgattta 16953418  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||| || | |||||| ||||||||||| || ||||||  ||||||||||||||||| ||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 38008110 - 38007950
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || || | |||||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 38007950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42192627 - 42192789
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  42192627 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | ||||||||||| |||||| || ||||||  ||||||||||||||||| |||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 42192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16175734 - 16175890
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16175734 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 16175833  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || |  ||||| |||| |||||| || ||||||  |||||||||||||||||    
T  16175834 aaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaat 16175890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 13399807 - 13399965
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13399807 taaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaatatatagtttaaggacaattttgttcgatttaaa 13399906  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    | | | | |||||||||| |||||| || ||||||||||||| |||| || ||| |||||    
T  13399907 aga-aatagaccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaagcc 13399965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4355916 - 4355754
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4355916 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 4355817  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || |  ||||| |||| |||||  || ||||||  ||||||||||||||||| ||||||    
T  4355816 aaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagcca 4355754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43216094 - 43216255
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43216094 actaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 43216193  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || |||| |  ||||| ||||||||||| |||||    
T  43216194 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcc 43216255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15551071 - 15551215
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagattgg 111  Q
    |||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||  |    
T  15551071 atttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgatttaaaaaatatatg 15551170  T
Q  112 accattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  |||||| || ||||||||||| |||||||||||||    
T  15551171 accatttttgtgagttggtcaaaatggtagggccaaaagtgtaat 15551215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 5560161 - 5560051
Alignment:
Q  52 actaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagt 151  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| || ||||||||||||||||||||    
T  5560161 actaaaactgcaaaaaatatatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagt 5560062  T
Q  152 gtaatgaagcc 162  Q
    ||||| |||||    
T  5560061 gtaattaagcc 5560051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13399583 - 13399481
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttccattta 13399484  T
Q  101 aaa 103  Q
    |||    
T  13399483 aaa 13399481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 649677 - 649516
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattgg 111  Q
    ||||| ||||| ||| |||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||    
T  649677 catttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtagg 649578  T
Q  112 accattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatctttttatg 173  Q
    |||| |||| | |||| || || |||  ||||||||||||||||| ||||| | ||||||||    
T  649577 accaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagccttgtttttatg 649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 4809040 - 4808904
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4809040 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacatatagtttatggacgattttgttcgattta 4808941  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatg 137  Q
    ||| || | ||| || |||| |||||| || ||||||    
T  4808940 aaagaggtaggatcaatttcgtgagttggtcaaaatg 4808904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15550835 - 15550679
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| |||||||| ||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15550835 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || | |||||| |||| |||||| || | ||||  |||| ||||||||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaat 15550679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 33920773 - 33920618
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  33920773 actaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcatatagtttagggacgattttgttcgattta 33920674  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || |  || || |||| |||||| || ||||||  |||||||||| ||||||    
T  33920673 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaat 33920618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32418318 - 32418159
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||      
T  32418318 actaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgatt-- 32418221  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||| ||||||||| |||||    
T  32418220 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcc 32418159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 32418560 - 32418692
Alignment:
Q  30 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcg 129  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || | | | || |||| ||| || |    
T  32418560 gagttggaaatagggagataagattaaaactgcaaaaaatatatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattgg 32418659  T
Q  130 ttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    | |||||| ||||||||||||| |||| |||||    
T  32418660 tcaaaatgataggaccaaaagtataattaagcc 32418692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 44220055 - 44220191
Alignment:
Q  28 tggagttggaaataggg--agataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgag 125  Q
    |||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| |  |||||||||| ||||    
T  44220055 tggagttggaaatagggggagatatgactaaaactacaaaaaacatatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgag 44220154  T
Q  126 ttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || || ||||||  ||||| ||||||||||| |||||    
T  44220155 ttggtcaaaatgcgaggacaaaaagtgtaattaagcc 44220191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5560935 - 5561023
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattt 89  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  5560935 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattt 5561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24140064 - 24140220
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||||||||| ||| |||||||||||||||||| |||  ||||||||||||||     ||||||||| ||||||||||||| ||||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaaa-----tatagtttatggacgattttgtttgattta 24140158  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| | ||||||||||| |||||| || || |||  |||| |||||||||||| |||||    
T  24140159 aaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagcc 24140220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 43160171 - 43160015
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  43160171 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattt 43160072  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || |  ||||| |||| ||||||  | ||||||  |||||||||| ||||||    
T  43160071 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaat 43160015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 6949848 - 6949991
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaaca--tatagtttaaggacgattttgttcgatttaaaaaagattggaccatttt 119  Q
    ||||| ||||||| |||||| ||||||| |||||||||||||||||| |  ||||||||| |||||||||||||| |||||||| |  | |||||| |||    
T  6949848 catttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaattt 6949947  T
Q  120 catgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    | |||||| || ||||||  ||||||||||||||||| ||||||    
T  6949948 cgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcca 6949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 63343 - 63497
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa------aacatatagtttaaggacgattttgttc 94  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||| ||||| ||||||||||||||||      ||||||||||||| |||||||||||||     
T  63343 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagtttagggacgattttgttt 63442  T
Q  95 gatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||| ||||  |||||||||| |||||| || |||||   ||||||||||    
T  63443 gatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaa 63497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 31797166 - 31797323
Alignment:
Q  4 aaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    ||||||| ||||||| ||| ||| | |||||| ||||||| || || ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgaaa 31797264  T
Q  104 aagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
     ||    |||||||||| |||| | || ||||||  ||||||||||||||||| |||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcc 31797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 9330179 - 9330335
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||| ||  ||| |  ||||| ||||||| ||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  9330179 actaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgattt 9330278  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || |  ||| | |||| |||||| || ||||||  |||||||||||||||||    
T  9330279 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaat 9330335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 649801 - 649877
Alignment:
Q  80 aggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||| || |||||| ||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaat 649877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 28143416 - 28143575
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||| ||||||| ||| ||| |||||||| |||||||  | || ||||||||||||||||| ||| |||||||| |||||||||||||||||||     
T  28143416 ctaaaactgtcatttctctgcgtttctggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgatttg 28143513  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| ||   ||||||||||| |||| | || ||||||  ||||||||||||| ||| |||||    
T  28143514 aaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcc 28143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 25336034 - 25336146
Alignment:
Q  51 gactaaaactgcaaaaaac-atatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||||||||||||  ||||| |||| ||||||||||||||||||||||| |  | |||||| |||| |||||| || ||||||  ||||||||||    
T  25336034 gactaaaactgcaaaaaaatatataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaa 25336133  T
Q  150 gtgtaatgaagcc 162  Q
    ||||||| |||||    
T  25336134 gtgtaattaagcc 25336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 14942230 - 14942392
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--cat-atagtttaaggacgattttgttcgatt 98  Q
    |||||||||| |||||| ||||||| |||||||| |||||||  | || ||||||||||||||||||  ||| ||| |||| |||| |||||||||||||    
T  14942230 ctaaaactgcgatttctctgcatttctggagttgaaaataggatg-taggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcgatt 14942328  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    | ||| |||   |||||||||| |||| | || ||||||  | ||||||||||||||| |||||    
T  14942329 tgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagcc 14942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 5035972 - 5035905
Alignment:
Q  54 taaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttc 120  Q
    ||||||||||||||| || |||||||| ||||| |||||||||||||||||||||  |||||||||||    
T  5035972 taaaactgcaaaaaatatgatagtttagggacggttttgttcgatttaaaaaagacaggaccattttc 5035905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43215870 - 43215805
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa 66  Q
    |||||||||| ||||||| | | ||| |||||||| ||||||||||||| ||||||||||||||||    
T  43215870 actaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22445801 - 22445699
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||| ||||  ||| || ||||| |||||||||||||  |||||||||| ||||||   ||| || |||||||||| |||||||||||    
T  22445801 actaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactgtaaaaaaaaacat-taatttaaggacggttttgttcgat 22445703  T
Q  98 ttaa 101  Q
    ||||    
T  22445702 ttaa 22445699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 9329974 - 9329918
Alignment:
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| ||||||||||  |||||| || ||||| |||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaat 9329918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 9330038 - 9329980
Alignment:
Q  5 aaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgca 63  Q
    |||||| ||||||||||| ||| | |||||||||||| ||||||| |||||||| ||||    
T  9330038 aaactgtcatttctgtgcgtttctagagttggaaataaggagataggactaaaagtgca 9329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 3822995 - 3822927
Alignment:
Q  88 tttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| |||||||| |   ||| || ||||||||||| |||||||||  |||||||||||||||||    
T  3822995 tttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgtaat 3822927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38535470 - 38535309
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38535470 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38535371  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  38535370 aaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 38535309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 49951707 - 49951552
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||  |||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49951707 actaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 49951608  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| |||||| || |||||||||||||||||||||||||    
T  49951607 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 49951552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 41998391 - 41998229
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41998391 actaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 41998292  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| |||||||||||  ||||| || ||||||||||||||||||||||||| |||||    
T  41998291 aaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 41998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43678456 - 43678294
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43678456 actaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 43678357  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||||||||  |||||| ||| |||||| || ||||||||||||||||||||||||| ||||||    
T  43678356 aaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcca 43678294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32730774 - 32730929
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32730774 actaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaacatatagtttaaggacgattttgttcaattta 32730873  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||    
T  32730874 aaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaat 32730929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 55389766 - 55389611
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55389766 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 55389667  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| | ||||||||||| |||||| ||  |||||| |||||||||||||||||    
T  55389666 aaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaat 55389611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 49720767 - 49720907
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||     
T  49720767 catttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcg 49720866  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || ||||| ||||||||||||||||||| |||||    
T  49720867 tgagttggtcaaaatagtaggaccaaaagtgtaattaagcc 49720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 51473240 - 51473396
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51473240 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 51473339  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| ||||||||||| |||||| || |||||||||||| ||||||||||||    
T  51473340 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaat 51473396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50662797 - 50662960
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50662797 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 50662896  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    ||||||||  ||| |||||| |||||| || |||||||||||||||||||| |||| |||||||    
T  50662897 aaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagccat 50662960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 44676857 - 44677012
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44676857 actaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 44676956  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  |||||||||| |||||| || |||||||||||||||||||||||||    
T  44676957 aaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 44677012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51828342 - 51828505
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  51828342 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattt 51828441  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||| ||  |||||||||| |||||| || ||| ||||||||||||||||||||| ||||||    
T  51828442 aaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagcca 51828505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 329986 - 329852
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  329986 catttatggagttggaaacagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcg 329887  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| || ||||||| || ||||||||||||||    
T  329886 tgagttggtcaaaatggaagaaccaaaagtgtaat 329852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 47431858 - 47431696
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  47431858 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattt 47431759  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || |  |||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  47431758 aaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 47431696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51828925 - 51829087
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||    
T  51828925 actaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgtttgaatta 51829024  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||||||||  |||||||||| ||||||  | ||||| ||| ||||||||||||||| ||||||    
T  51829025 aaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagcca 51829087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 55389982 - 55390143
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  |||||||||||| ||||||    
T  55389982 actaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaacatatagtttagtgacgattttgtttgattta 55390081  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| | ||||||||||| ||| || |||||||||  ||||||||||||||||| |||||    
T  55390082 aaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcc 55390143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 330223 - 330382
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgtttgatttaaa 330322  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| | ||||||||||| |||||| || ||||||  ||||||||| ||||||| |||||    
T  330323 aaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcc 330382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 40839037 - 40839192
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40839037 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 40839136  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || |  |||||||||| |||||| || ||||||  |||||||||||||||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaat 40839192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16701174 - 16701338
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||||||  |||||  ||| |||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||     
T  16701174 actaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaa 16701273  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||||  |||||||||| |||||| || |||||||||||||||||| |||||| |||||    
T  16701274 ttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 16701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46013807 - 46013968
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46013807 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 46013906  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||||||||| | ||||||||   ||||| || |||||| ||| |||||||||||||| ||||    
T  46013907 aaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52375716 - 52375877
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  52375716 actaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcaattta 52375815  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||||||||||| |||||| || ||||||  ||||||||||||||||| |||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 52375877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2051460 - 2051295
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa----catatagtttaaggacgattttgttcga 96  Q
    |||||||||| ||||| ||||| ||| ||||||| |||||||||| ||| || |||||||||||||||    ||||||||||||| ||||||||||||||    
T  2051460 actaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 2051361  T
Q  97 tttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  2051360 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 2051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 52237202 - 52237357
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||  |||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  52237202 actaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgattta 52237301  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | ||||||||||| |||||| || ||||||  |||||||||||||||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaat 52237357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25535052 - 25534890
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagttta-aggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  25535052 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatataatttaggggacgattttgttcgattt 25534953  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | ||||||||||||||| || || ||||||  ||||||||||||||||| |||||    
T  25534952 aaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagcc 25534890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34104798 - 34104638
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||| ||||| ||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  34104798 actaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaacatatagtttaatgacgattttgttcaattta 34104700  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| | ||||||||| |||||| || |||||||||| || |||||||||||||||||    
T  34104699 aaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagcc 34104638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51828118 - 51827957
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  51828118 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacatatagtttagggacgattttgttcgattta 51828019  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  51828018 aaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51827957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40838813 - 40838658
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40838813 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttatggacgattttgtttgattta 40838714  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || |  |||||||||| |||||| || ||||||  |||| ||||||||||||    
T  40838713 aaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaat 40838658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 40275479 - 40275640
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  40275479 actaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagagacgattttgttcgattta 40275578  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| ||||||    
T  40275579 aaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcca 40275640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44676633 - 44676471
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacatatagtttagggacggttttgttcgattta 44676534  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || |  || || ||||||||||| || ||||||  ||||||||||||||||| ||||||    
T  44676533 aaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagcca 44676471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 52375488 - 52375326
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||| ||| ||| ||||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  52375488 actaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 52375389  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || |  |||||||||| ||| || |||||||||  ||||||||||||||||| ||||||    
T  52375388 aaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagcca 52375326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51473016 - 51472855
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||| ||||||    
T  51473016 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacaattttgtttgattta 51472917  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||  | ||||||||||| || ||||||  |||||||||||| |||| |||||    
T  51472916 aaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagcc 51472855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 14654352 - 14654199
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||| |||||||||||||||        ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  14654352 actaaaactgtcatttctgtgcgtttacggagttggaaatagg--------actaaaaatgcaaaaaacatatagtttaaagacgattttgttcgattta 14654261  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||||| |||||| || |||||||||| | |||||||||||| |||||    
T  14654260 aaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagcc 14654199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32730550 - 32730395
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| |||||    
T  32730550 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 32730451  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | |||||| ||||| ||||| || ||||||  |||||||||||||||||    
T  32730450 aaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaat 32730395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43678669 - 43678832
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  43678669 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaacatatagtttatggacgattttgttcgattta 43678768  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    ||| || ||||||||  ||| ||||||  | ||||||  ||||||||||||||||| |||||||    
T  43678769 aaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccat 43678832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 40275256 - 40275091
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| ||||||| |||||| ||||||| ||||||||||||||||||  |||| |||||| |||| |||||||||||||    
T  40275256 actaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatt 40275157  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    ||||| || | ||||||||||| |||||| || ||||||  ||||||||||||||||| |||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccat 40275091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 49951931 - 49952093
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  49951931 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatgtagtttaatgacgattttgttcgattta 49952030  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || |  ||||| |||| |||||| || ||||||  |||||||||| |||||| ||||||    
T  49952031 aaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcca 49952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 22370758 - 22370602
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||||||  |||||||||| ||| |||||||||| ||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||| | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||| | ||||||||||| |||||| || ||||||  |||||||||||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 22370602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30513883 - 30513728
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgca-aaaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| || |||| |||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  30513883 actaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaag-acgattttattcgattt 30513785  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| ||||||||||| |||||| || ||||||  |||||||||| ||||||    
T  30513784 aaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaat 30513728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 52236977 - 52236822
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52236977 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 52236878  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || |  |||||||||| ||| ||  | ||||||  ||||| |||||||||||    
T  52236877 aaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaat 52236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51828701 - 51828539
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  51828701 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattt 51828602  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || |  ||||| |||| | | || || ||||||  ||||||||||||||||| |||||    
T  51828601 aaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagcc 51828539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2044432 - 2044271
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||  |||| ||||| ||| | |||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  2044432 actaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacatataatttatggacgattttgttcgattta 2044333  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  ||||||||||||||||| || ||||||  || |||||||||| ||| |||||    
T  2044332 aaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaagcc 2044271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38535680 - 38535841
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||||  |||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  38535680 actaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattta 38535779  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| |||| |||| | |||| | |||| || ||||||   ||||||||||| |||| |||||    
T  38535780 aaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaagcc 38535841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46013583 - 46013422
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||| | ||||| ||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  46013583 actaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatactttagggacgattttgttcgattta 46013484  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  ||||| |||| |||||| || ||||||  |||| |||||||||||| |||||    
T  46013483 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 46013422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 49720532 - 49720371
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||| |||||| ||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  49720532 actaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacgattttgttcgattta 49720433  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| |||||| || ||||||  |||| |||||||||||| |||||    
T  49720432 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcc 49720371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14654576 - 14654735
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||| ||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  14654576 actaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaac--atagtttacggacgattttgttcgattta 14654673  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |  ||| |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  14654674 aaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 14654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 16689497 - 16689364
Alignment:
Q  23 atttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcat 122  Q
    |||| |||||| |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| || | |||||| |||| |    
T  16689497 atttctggagtcggaaatagggtgataggactaaaactgcaaaaaacatatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgt 16689398  T
Q  123 gagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| || |||||| ||||||||||| ||||||    
T  16689397 gagttggtcaaaatgctaggaccaaaactgtaat 16689364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34105033 - 34105190
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc--aaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| || ||||||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  34105033 actaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 34105132  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| ||   ||||||  ||| | |||| || ||||||  |||||||||||||||||    
T  34105133 taaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39010235 - 39010075
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||  ||||| ||||| |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||| || |||||||||||||||    
T  39010235 actaaaactatcatttatgtgc-tttatggagttgaaaatagggagatgtgactaaaactgcaaaaaacatacagtttaagaacaattttgttcgattta 39010137  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  || || |||  |||||| || ||||||  |||||||||| |||||| |||||    
T  39010136 aaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 39010075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 36701482 - 36701636
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||||||||||| ||  ||| |||||||| ||||||| || || ||||||||||||||||||||| |||||||| ||| |||||||||||||||     
T  36701482 ctaaaactgccatttctatgtgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttg 36701580  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| |||   |||||||||| |||| | || ||||||  |||||||||||||||||    
T  36701581 aaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaat 36701636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 50900914 - 50901073
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||||| |||||| ||| |||||||||||| ||||||| || || ||| ||||||||||||||||||||||||| ||||| |||||||||||||      
T  50900914 ctaaaactgcaatttctttgcgtttatggagttgaaaatagg-aggtaggacaaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgt 50901012  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||   || |||||||  |||| | || ||||||  ||||||||||||||||| |||||    
T  50901013 aagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 50901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 41998643 - 41998774
Alignment:
Q  30 gagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttc 128  Q
    |||||| |||||||||| || |||||||||||||||||| ||||||||| | ||||||||||||||||||||||| || | |||||| |||| | ||||     
T  41998643 gagttgaaaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttg 41998740  T
Q  129 gttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||||||  ||||||||||||||||| |||||    
T  41998741 gtcaaaatgcaaggaccaaaagtgtaattaagcc 41998774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 55192277 - 55192117
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||| ||| |||||||| ||||||| || || |||||||||| |||||||||||||||||| ||||| ||||||| ||||| |    
T  55192277 ctaaaactgtcatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactacaaaaaacatatagtttatggacggttttgtttgatttga 55192179  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    || ||    |||||||||| |||| | || ||||||   |||| ||||||||||| ||||||    
T  55192178 aagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagcca 55192117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 39010457 - 39010554
Alignment:
Q  51 gactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||| ||| ||||||| |||| | || ||||||| |||| |||||    
T  39010457 gactaaaactg-aaaaaacatacggattaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 27200078 - 27200237
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||| ||| ||||||| ||| ||| |||||||| ||||||| || || ||||||||||||||||||||| |||||||| ||||| | |||||||||||     
T  27200078 ctaaacctgtcatttctctgcgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttg 27200175  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| ||   | ||||||||| |||| | || ||||||  ||||||||||||||||| |||||    
T  27200176 aaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 27200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 49407955 - 49407796
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||| || ||||||| ||| ||| |||||||| ||||||| || || ||||||||||| | |||||||| |||||| ||||| |||||||| |||| |    
T  49407955 ctaaaattgtcatttctctgcgtttttggagttgaaaatagg-aggtatgactaaaactgtacaaaacataaagtttagggacggttttgttctatttga 49407857  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||    |||||||||| |||| | || ||||||  ||||||||||||||||| |||||    
T  49407856 aagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcc 49407796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43222551 - 43222449
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaa-tagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||| | ||| |||||||| ||| ||||| | || || ||||| |||||||||||||||||||| |||||||||||||||||||    
T  43222551 actaaaactgtcatttttgtacgtttctggagttgaaaaataggggg-taggattaaaaatgcaaaaaacatatagtttagggacgattttgttcgattt 43222453  T
Q  100 aaaa 103  Q
    ||||    
T  43222452 aaaa 43222449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 43222774 - 43222927
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaa-tagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||| ||||| ||| |||||||| ||| ||||| | |  |||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  43222774 actaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaacataaagtttagggacgattttgttcgatt 43222872  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgt 153  Q
    ||||| ||    |||||||||| || | | || ||||||  ||||||||||||||    
T  43222873 taaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgt 43222927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 37075848 - 37075687
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcgatt 98  Q
    ||||||| | ||||||| ||| ||| |||||||| ||||| | || || ||||||||||||||||||   ||||||||||| |||||  |||||| ||||    
T  37075848 ctaaaacggtcatttctctgcgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaaaaaacatatagtttagggacgggtttgtttgatt 37075750  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    | ||| ||   ||||||||||| |||||| || ||||||    ||||||||||||||| ||||    
T  37075749 tgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 49408169 - 49408326
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc-aaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||||||||||| ||| ||| |||||||| ||||   ||| || |||||||||||| ||||||||| ||||||| |||||  |||||||||||||    
T  49408169 ctaaaactgccatttctttgcgtttctggagttgaaaat---gaggtaggactaaaactgcaaaaaaacatgatagttt-aggacagttttgttcgattt 49408264  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
     ||| |||    ||||||||| |||| | || ||||||  || |||||||||||||| ||||    
T  49408265 gaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaagc 49408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 37076106 - 37076219
Alignment:
Q  48 taagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggacca 146  Q
    ||||||||||| || ||||||||| |||||||| ||||||||||||||||||| ||| ||   ||||||||||| |||| |  | ||||||  |||||||    
T  37076106 taagactaaaaatgtaaaaaacatgatagttta-ggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggacca 37076204  T
Q  147 aaagtgtaatgaagc 161  Q
    ||| |||||| ||||    
T  37076205 aaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 37847206 - 37847302
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||| || ||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |||||||| |||||||| |||||  ||||||||||||    
T  37847206 ctaaaattgtcatttctctgcatttctgaagttgaaaatagg-agataggactaaaactgc-aaaaacatgatagtttagggacggctttgttcgattt 37847302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 27199813 - 27199708
Alignment:
Q  52 actaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaag 150  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||||| ||| ||    |||||||||| |||| | || ||||||  ||||||||||     
T  27199813 actaaaactgcaaaaaaacatatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaa 27199714  T
Q  151 tgtaat 156  Q
    ||||||    
T  27199713 tgtaat 27199708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 8873850 - 8873732
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-cat-atagtttaaggacgattttgttcgattt 99  Q
    ||||||||| ||||||| ||| ||| || ||||| ||||||| || ||||||||||||||||||||| ||| |||| ||| | ||| |||||||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-aggtaagactaaaactgcaaaaaaacatgataggttatg-acggttttgttcgattt 8873753  T
Q  100 aaaaaagattggaccattttc 120  Q
    |||| |||   ||||||||||    
T  8873752 aaaagagacatgaccattttc 8873732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 8874072 - 8874173
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa--aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||||| ||||||| ||| ||| |||||||| ||||||  || ||  |||||||||||||||  ||||||||||||| ||| | |||||||||||||    
T  8874072 ctaaaactgtcatttct-tgcgtttctggagttgaaaataga-aggtagaactaaaactgcaaaaaaaacatatagtttagggaaggttttgttcgattt 8874169  T
Q  100 aaaa 103  Q
    ||||    
T  8874170 aaaa 8874173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 36701206 - 36701106
Alignment:
Q  63 aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||    || ||||||| ||||||  | ||||||  ||||||||||||||||| ||||    
T  36701206 aaaaaacatgatagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagc 36701107  T
Q  162 c 162  Q
    |    
T  36701106 c 36701106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 33412609 - 33412700
Alignment:
Q  71 tatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| ||||||||||||||||||  ||| |||  | ||||||||| |||| |  | ||||||  ||||||||||||||||| |||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagcc 33412700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 12141122 - 12141238
Alignment:
Q  48 taagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggacca 146  Q
    ||||| |||||||||||||||||| ||||||||  || | ||||||||||||| ||| || | ||||||||| | |||  |  | ||||||  |||| ||    
T  12141122 taagattaaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaaca 12141221  T
Q  147 aaagtgtaatgaagcca 163  Q
    |||||||||| ||||||    
T  12141222 aaagtgtaattaagcca 12141238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 50900644 - 50900569
Alignment:
Q  51 gactaaaactgc-aaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgag 125  Q
    |||||||||||| ||||||||| |||||||| ||||| ||||||||||||| ||| || | ||||||||||| ||||    
T  50900644 gactaaaactgcgaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagttaggaccattttcgtgag 50900569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 41260403 - 41260271
Alignment:
Q  30 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  41260403 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttgg 41260304  T
Q  130 ttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    | ||||||||||||||||||||||||| |||||    
T  41260303 tcaaaatggtaggaccaaaagtgtaattaagcc 41260271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 15256213 - 15256377
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa---aacatatagtttaaggacgattttgttcgat 97  Q
    ||||||| || ||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  15256213 actaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 15256312  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  15256313 ttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 15256377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 18049750 - 18049596
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||| | ||||||||| |||||| || |||||||||||||||||||||||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 18049596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 18428146 - 18428302
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18428146 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 18428245  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| ||||||||||| |||||| || |||||||||||||||||||||||||    
T  18428246 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 18428302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34799241 - 34799079
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| || ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  34799241 actaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgattt 34799142  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || |||||||||||||||||| || ||||||||| ||||||||||||||| |||||    
T  34799141 aaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagcc 34799079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 599883 - 600044
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||| ||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  599883 actaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttccattta 599982  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||  |||||||||| | |||| || ||||||||||||||||||||||||| |||||    
T  599983 aaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagcc 600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16578481 - 16578642
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| | | |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||     
T  16578481 actaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacatatagtttaatgatgattttgttcgatttg 16578580  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||   ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  16578581 aaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagcc 16578642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 9797111 - 9797267
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||||||||||| || |||||    
T  9797111 actaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgattt 9797210  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| | ||||||||| |||||| || |||||||||||||||||||||||||    
T  9797211 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 9797267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9796887 - 9796725
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  9796887 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttatggatgattttgttcgattta 9796788  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || | |||||| |||  |||||| || ||||||  ||||||||||||||||| ||||||    
T  9796787 aaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcca 9796725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5730978 - 5730817
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||| | ||| |||||||  |||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  5730978 actaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaacatatagtttaaggacgattttgtttgattta 5730879  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| |||| |||||| |||||| || ||||||||||||||||||||||||| |||||    
T  5730878 aaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 5730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28254587 - 28254431
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| || ||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28254587 actaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaattt 28254488  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| |||| ||||||||||| ||||||  | |||||||||||||||||||||||||    
T  28254487 aaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaat 28254431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 15255993 - 15255853
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||| ||||     
T  15255993 catttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcg 15255894  T
Q  122 tgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| || ||||||  ||||||||||||||||| |||||    
T  15255893 tgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 15255853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28254811 - 28254971
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  28254811 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacgattttgttcgattta 28254910  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||| || | |||||| |||| |||||| || ||||||  ||||||||||||||||| ||||    
T  28254911 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35427197 - 35427358
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  35427197 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacgattttgttcggttta 35427296  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | | ||||||||| |||||| || ||||||  ||||||||||||||||| |||||    
T  35427297 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcc 35427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42035933 - 42035773
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||| | |||||||||| ||||||||||||||||||||    
T  42035933 actaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatatatagtttatggacgattttgttcgattta 42035834  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||| || | | ||||||||| |||||| || ||||||  ||||||||||||||||| ||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7911001 - 7911163
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||||||||||| |||||| | |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7911001 actaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 7911100  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| || | | ||||||||| |||||| || ||||||  ||||  ||||||||||| ||||||    
T  7911101 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagcca 7911163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 599693 - 599532
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  599693 actaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacatataatttagggatgattttgttcgattta 599594  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  ||||| |||| |||||| || ||||||  |||||||||| |||||| |||||    
T  599593 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 599532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34799468 - 34799629
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||  ||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  34799468 actaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacatatagtttagggacaattttgttcgattta 34799567  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| |||| | | || || ||||||  ||||||||||||||||| |||||    
T  34799568 aaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagcc 34799629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35694255 - 35694418
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaaca--------tatagtttaaggacgattttgt 92  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||| |||||||| |        ||||||||||||||||||||||    
T  35694255 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagtttaaggacgattttgt 35694354  T
Q  93 tcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||||||  | ||||||||||  |||||| || ||||||| |||||||||||||||||    
T  35694355 tcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaat 35694418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 2208864 - 2208720
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaac-atatagtttaaggacgattttgttcgatttaaaaaagattgg 111  Q
    |||||||| | ||| |||| ||| ||||||||||||| |||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||| ||    
T  2208864 atttctgtacgtttctggaattgaaaatagggagatatgactaaaattgtaaaaaaatatatagtttaaggacgattttgttcgatttaaaaaagatagg 2208765  T
Q  112 accattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    || |||||| |||||| || |||||||||||| ||||||||||||    
T  2208764 acaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaat 2208720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41260646 - 41260748
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41260646 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 41260745  T
Q  101 aaa 103  Q
    |||    
T  41260746 aaa 41260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 18049978 - 18050131
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    ||||||||  |||||||||| ||| |||||||| ||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  18049978 taaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacatatagtttagggacgattttgttcgatttaaa 18050077  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    | || |  ||||| |||| |||||| || ||||||  |||||||||| ||||||    
T  18050078 agaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaat 18050131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5731197 - 5731333
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5731197 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 5731296  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatg 137  Q
     ||||| | | |||| |||| |||||| || ||||||    
T  5731297 taaaaggtagaaccaatttcctgagttggtcaaaatg 5731333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26252970 - 26252863
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||| ||| |||||||| || ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26252970 actaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacgattttgttcgattta 26252871  T
Q  101 aaaaagat 108  Q
    ||| ||||    
T  26252870 aaagagat 26252863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 16578242 - 16578108
Alignment:
Q  28 tggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagtt 127  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||| || | |||||| |||| ||||||    
T  16578242 tggagttggaaatagggagataggaccaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagtt 16578143  T
Q  128 cgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
     || ||||||  || ||||||| |||||| |||||    
T  16578142 ggtcaaaatgcaagaaccaaaaatgtaattaagcc 16578108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35426974 - 35426885
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgatttt 90  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||    
T  35426974 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaaacatatagtttaaggaccatttt 35426885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6115495 - 6115657
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| | |||||| ||||| |||||||  ||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  6115495 actaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | |||||| ||||  ||||| || |||||   |||||||||||| |||| |||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagcc 6115657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35694031 - 35693869
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaa--acatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| ||||||||||| |||||  | |||||||||| |||||||||| |||||||    
T  35694031 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatt 35693932  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    ||||| || | | | ||||||| | | || || ||||||  |||| |||||||||||| ||||    
T  35693931 taaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagc 35693869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42036156 - 42036259
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||||||| |||||||||||||| |   ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  42036156 actaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 42036255  T
Q  100 aaaa 103  Q
    ||||    
T  42036256 aaaa 42036259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7910778 - 7910616
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataa--gactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||||||| | ||||| ||||||  ||||||   ||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  7910778 actaaaactgtcatttctgtgcatttcttgagttagaaataaagagatataggactaaa-ctgcaaaaaacatataatttagggacgattttgttcgatt 7910680  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || |   ||||||||| ||||||  | ||||||  |||||||||| |||||| |||||    
T  7910679 taaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcc 7910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 18674256 - 18674207
Alignment:
Q  54 taaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18674256 taaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaa 18674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 18805322 - 18805170
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||  ||| |||||||| | ||||| || || ||||||||| | |||||||||||||||   ||||  |||||||||||||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggagttgaagatagg-aggtaggactaaaacaggaaaaaacatatagttctgggacagttttgttcgatttaa 18805224  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    || |||  | ||||||||| |||| | || ||||||   ||||||||||||||||    
T  18805223 aagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaat 18805170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 28877324 - 28877429
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||| ||||||||||| |||||| | |||| ||||||||| |||| ||| || |   ||||||||| |||||| || ||||||  ||||||||||    
T  28877324 gactaaaacagcaaaaaacatgatagtt-agggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaa 28877422  T
Q  150 gtgtaat 156  Q
    |||||||    
T  28877423 gtgtaat 28877429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 35426894 - 35426848
Alignment:
Q  110 ggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  35426894 ggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaat 35426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35163859 - 35163815
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaataggga 45  Q
    |||||||||| ||||||||||| ||| | ||||||||||||||||    
T  35163859 actaaaactgtcatttctgtgcgtttctcgagttggaaataggga 35163815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5114629 - 5114458
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5114629 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 5114530  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatctttttat 172  Q
    |||||||| ||||||||||| ||||||  | |||||||||||| ||||| |||||| ||||| || ||||||    
T  5114529 aaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagccttcattttat 5114458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24640570 - 24640725
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||| ||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24640570 actagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 24640669  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| ||||||||||| ||||||  | |||||||||||||||||||| ||||    
T  24640670 aaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataat 24640725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25472397 - 25472560
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25472397 actaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 25472496  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||||||  |||||||||| |||||| || |||||||||||| |||||||||||| ||||||    
T  25472497 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcca 25472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 5120856 - 5121015
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaa 5120955  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    | || | |||  | |||| |||||| || ||||||  ||||||||||||||||| |||||    
T  5120956 agaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 5121015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29891465 - 29891630
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatt-- 98  Q
    |||||||||  ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||      
T  29891465 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcaattta 29891564  T
Q  99 --taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
      |||| || |  |||||||||||| ||||| || ||||||||||||||||||||||||| |||||    
T  29891565 aataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 29891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 30251076 - 30251238
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaa-acatatagtttaaggacgattttgttcgattt 99  Q
    |||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  30251076 actaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgattt 30251175  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||  ||| |||||  |||||| || ||||| |||||| |||||||||||| |||||    
T  30251176 aaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagcc 30251238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 31073527 - 31073690
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  31073527 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacaattttgttcgattta 31073626  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    ||| || |  ||||| |||| |||| | || ||||||  ||||||||||||||||| |||||||    
T  31073627 aaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccat 31073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31573886 - 31573720
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa----aaaacatatagtttaaggacgattttgttcga 96  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||    ||||||||||||||||| ||||||||||||||    
T  31573886 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 31573787  T
Q  97 ttt-aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| |||||| || |||| |||||| |||||| || |||||||||||||||||||| |||| |||||    
T  31573786 tttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcc 31573720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31574110 - 31574280
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31574110 actaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 31574209  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatcttttta 171  Q
    ||| || |  ||| | |||| |||||| || ||||||  ||||||||||||||||| ||||| | ||||||    
T  31574210 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctttttttta 31574280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 25469010 - 25468855
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa--aaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||| ||||||||||| ||| |||| ||  ||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgattta 25468911  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| ||||  ||||| |||| |||||| || ||||||  |||||||||||||||||    
T  25468910 aaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaat 25468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28636581 - 28636669
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattt 89  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28636581 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattt 28636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 31073284 - 31073136
Alignment:
Q  28 tggagttggaaatagggagataagactaaaactgcaaaaaaca-tatagtttaaggac------gattttgttcgatttaaaaaagattggaccattttc 120  Q
    |||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||      |||||||||||||||||||||||| |||||||||||    
T  31073284 tggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaaaagataggaccattttc 31073185  T
Q  121 atgagttcgttaaaatggtaggaccaaaagtgtaatgaagccatctttt 169  Q
    ||| ||| || |||||   ||||||||||||||||| ||||||| ||||    
T  31073184 atgtgttggtcaaaattaaaggaccaaaagtgtaattaagccatttttt 31073136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 28636435 - 28636351
Alignment:
Q  18 tgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaa 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgca-aaaacatatagtttaggaacgattttgttcgatttaaaa 28636351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29891241 - 29891080
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||||||||  | ||||| || ||||||||||||||||| ||||| ||||||||| ||||    
T  29891241 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattgtaaaaaacatatagtttagggacgcttttgttcggttta 29891142  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || |  || || |||| | |||| || ||||||  |||| |||||||||||| |||||    
T  29891141 aaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaagcc 29891080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 35163572 - 35163733
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa--aacatatagtttaaggacgattttgttcgattt 99  Q
    ||||||||| ||||||| ||  ||| |||||||| ||||||| || || ||||||||||||||||  ||||||||||||| ||||||||||||| |||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtttgattt 35163670  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
     ||| ||   | ||||||||| |||| | || ||||||   |||||||||||||||| |||||    
T  35163671 gaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcc 35163733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 32836431 - 32836543
Alignment:
Q  51 gactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaag 150  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| ||    |||||||||| |||| | || ||||||  ||||| |||||    
T  32836431 gactaaaactgcaaaaaacatacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaag 32836530  T
Q  151 tgtaatgaagcca 163  Q
    |||||| ||||||    
T  32836531 tgtaattaagcca 32836543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30250852 - 30250774
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagttta 79  Q
    |||||||||| ||||||||||| ||| || |||||||||||||||||   ||||||| ||||||||||| |||||||||    
T  30250852 actaaaactgtcatttctgtgcgtttctgtagttggaaatagggagaatggactaaagctgcaaaaaacttatagttta 30250774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 33095859 - 33095756
Alignment:
Q  17 ctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggacca 115  Q
    |||||| ||| ||||| || ||||||| || || ||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||| || |  |||||    
T  33095859 ctgtgcgtttttggaggtgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggtgagacca 33095761  T
Q  116 ttttc 120  Q
    |||||    
T  33095760 ttttc 33095756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 35163295 - 35163190
Alignment:
Q  51 gactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaa 149  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||| |||   |||||||||  |||| | || ||||||  ||||| ||||    
T  35163295 gactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaa 35163197  T
Q  150 gtgtaat 156  Q
    |||||||    
T  35163196 gtgtaat 35163190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11523846 - 11523747
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgc-aaaaaacat-atagtttaaggacgattttgttcgatt 98  Q
    |||| |||||| |||| ||||| |||||||||||| |||||  ||| || |||||||||||| ||||||||| |||||||| ||||| ||||||| ||||    
T  11523846 actagaactgcaatttttgtgcgtttatggagttgaaaata-tgaggtaggactaaaactgcaaaaaaacatgatagtttagggacggttttgtttgatt 11523748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 33096007 - 33096158
Alignment:
Q  16 tctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggac----gattttgttcgatttaaaaaagattg 110  Q
    ||||||| ||| ||||| || |||||||| | || |||||||| |||||||||||| |||||||||||||    | ||||||||||||| ||| |||       
T  33096007 tctgtgcgtttttggaggtgaaaataggggg-taggactaaaattgcaaaaaacatgatagtttaaggacagttggttttgttcgatttgaaagagacat 33096105  T
Q  111 gaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||||||||||||||| | || ||||||  | || |||||||| ||| ||||||    
T  33096106 gaccattttcatgagctggtaaaaatgcgaagaacaaaagtgcaattaagcca 33096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 8e-56; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34555765 - 34555922
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa--aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34555765 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatt 34555864  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||| ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaat 34555922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 21938724 - 21938569
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21938724 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 21938625  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||  || ||||||| ||||||  | ||||||||| |||||||||||||||    
T  21938624 aaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaat 21938569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9992316 - 9992154
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9992316 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggaccattttgttcgattta 9992217  T
Q  101 aaaaagattggaccattttcatgagttcgt-taaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||||||| | |||||| ||  ||||||||||||||||||||||||| |||||    
T  9992216 aaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagcc 9992154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 37505229 - 37505067
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||||||| ||||| |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 37505130  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||| | ||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 37505067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 50305169 - 50305325
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaaca---tatagtttaaggacgattttgttcgattt 99  Q
    |||||||| ||||| ||||  |||||||||||| ||||||||||||| |||||||||||||||||| |   |||||||||||||||||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaaggacgattttgttcgattt 50305268  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  50305269 aaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaat 50305325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 9992542 - 9992702
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| |||||||  || ||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacatatagtttaagcacgattttgttcgatttaaa 9992641  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||| |||||||||||||||||| || ||||||  ||||||||||||||||| ||||||    
T  9992642 aaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagcca 9992702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44954611 - 44954771
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  44954611 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggatgattttgtttgattta 44954710  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    |||||| |  || |||||||||||||| || ||||||  ||||||||||||||||| ||||    
T  44954711 aaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30786933 - 30786771
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30786933 actaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 30786834  T
Q  101 aaaaagattggacc-attttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||||| |||||| |||||| || ||||||  || |||||||||||||| |||||    
T  30786833 aaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagcc 30786771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52335895 - 52336056
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  52335895 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacgattttgttcgattta 52335994  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | |||||| ||||||||||| || |||||| ||| |||||||| ||||| |||||    
T  52335995 aaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagcc 52336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10278935 - 10279094
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||  ||| |||||||||| ||| ||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||    
T  10278935 actaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg---aaaacatatagtttaaggacgattttgttcgattta 10279031  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    |||||||| ||||||||||| |||||| || |||| ||||||| |||||||||||| ||||||    
T  10279032 aaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagcca 10279094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16299067 - 16299227
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  16299067 actaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttc-aatta 16299165  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || |||||||||||  |||||  | ||||||||||||| |||||| |||| |||||    
T  16299166 aaaaaaataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagcc 16299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1837666 - 1837505
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  1837666 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacaattttgttcgattta 1837567  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| ||||  || || |||| ||||||  | ||||||  ||||||||||||||||| |||||    
T  1837566 aaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 1837505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2868093 - 2868254
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| || || ||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2868093 actaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtgtagggacgattttgttcgattta 2868192  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| || | ||||||||||| || ||| || ||||||  |||| |||||||||||| |||||    
T  2868193 aaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagcc 2868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44954387 - 44954232
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| |||||||||||| || |||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  44954387 actaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaacatataatttaaagacgattttgttggattta 44954288  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||| |  |||||||||| |||||| || |||||||  |||| |||| ||||||    
T  44954287 aaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaat 44954232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8230026 - 8230128
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8230026 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 8230125  T
Q  101 aaa 103  Q
    |||    
T  8230126 aaa 8230128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23340344 - 23340182
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| |||||||| || ||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||| |  |||||||||||||||||    
T  23340344 actaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttatgagcgattttgttcgattta 23340245  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| |||| |||||| |||| |||||| || ||||||  | || |||||||||||| ||||||    
T  23340244 aaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagcca 23340182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 44582442 - 44582599
Alignment:
Q  1 actaaaactgccatttctgtgcatttat-ggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| | |||| || ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  44582442 actaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatt 44582541  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    | |||| |||  |||||||||| ||||||  | |||||||||| ||||||||||||||    
T  44582542 tgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaat 44582599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 17641749 - 17641909
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-----atagtttaaggacgattttgttcg 95  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |      |||||||| |||||||||||||||    
T  17641749 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcg 17641848  T
Q  96 atttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||| || |  |||||||||| |||||| || ||||||  |||||||||||||||||    
T  17641849 atttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 17641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34555542 - 34555379
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa--catatagtttaaggacgattttgttcgatt 98  Q
    |||||||||  ||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||    
T  34555542 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatt 34555443  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||| || | | |||| ||||  ||||| || ||||||  ||||||||||||||||| |||||    
T  34555442 taaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaagcc 34555379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4080182 - 4080027
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| | |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4080182 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactgtaaaaaacatatagtttagggacgattttgttcgattta 4080083  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || |  || || |||| |||||| || || |||  |||||||||||||||||    
T  4080082 aaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaat 4080027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37421323 - 37421166
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa--aaaacatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  37421323 actaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 37421224  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| || |  ||||| |||| ||| || || ||||||  | |||||||||||||||    
T  37421223 taaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaat 37421166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10278710 - 10278554
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 99  Q
    ||||||| || ||||| ||||| ||| |||||||| |||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  10278710 actaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 10278611  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||| || | ||| || |||| |||||| || ||||||  |||||||||||||||||    
T  10278610 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaat 10278554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2868072 - 2867917
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||| || ||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  2868072 actaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaacatatagtttaacgacaattttgttcgattta 2867973  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| ||||  || ||||||| |||||| || ||||||  | |||||||| ||||||    
T  2867972 aaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaat 2867917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44582218 - 44582063
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||| || ||||| ||||| |||||||||||||||| |  |||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  44582218 actaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacatataatttagagacgattttgttcgattta 44582119  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| || | |||||| |||| | |||| || ||||||  |||||||||||||||||    
T  44582118 aaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaat 44582063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 443936 - 444038
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  443936 actaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacatatagtttaggaacgattttgttcgattta 444035  T
Q  101 aaa 103  Q
    |||    
T  444036 aaa 444038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6224860 - 6224703
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaa--acatatagtttaaggacgattttgttcgatt 98  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||| |||||||||||||||||| |||||  | ||||| |||||||||||||||||||||||    
T  6224860 actaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgatt 6224761  T
Q  99 taaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||    | |||||||| ||||||| || |||||| ||||| ||||| ||||||    
T  6224760 taaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaat 6224703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 29439327 - 29439458
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaa--aacatatagtttaaggacgattttgttcgatttaaaaaagattggaccatttt 119  Q
    ||||| ||||||| |||||||| ||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  29439327 catttctggagtttgaaatagg-agataggactaaatctgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggatcatttt 29439425  T
Q  120 catgagttcgttaaaatggtaggaccaaaagtg 152  Q
    | ||||||  | |||||||| ||||||||||||    
T  29439426 cgtgagttgatcaaaatggtgggaccaaaagtg 29439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 16298814 - 16298683
Alignment:
Q  30 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcg 129  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||| |||| |||||| |    
T  16298814 gagttggaaataggtagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgg 16298715  T
Q  130 ttaaaatggtaggaccaaaagtgtaatgaagc 161  Q
    | ||||||  ||| |||||| |||||| ||||    
T  16298714 tcaaaatgcaagggccaaaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17641526 - 17641407
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||| || |||||||||||||||    
T  17641526 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactacaaaaaacgtatagtttaagaacaattttgttcgattta 17641427  T
Q  101 aaaaagattggaccattttc 120  Q
    |||||| |  ||||||||||    
T  17641426 aaaaaggtatgaccattttc 17641407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 37421386 - 37421500
Alignment:
Q  58 actgcaaaaaacatatagtttaaggacgattttgttcgattt-aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| || ||||||||| ||| |||||||||||    
T  37421386 actgcaaaaatcatatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaat 37421485  T
Q  157 gaagccatcttttta 171  Q
     || ||||| |||||    
T  37421486 taaaccatcctttta 37421500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 39485224 - 39485071
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||| ||| ||  ||| || ||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  39485224 ctaaaactgtcatctctctgtgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 39485126  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    || || | ||||||||||| |||| | || ||||||  |||||||||||||||||    
T  39485125 aagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaat 39485071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8229801 - 8229637
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa---aaaacatatagtttaaggacgattttgttcgat 97  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||   |||||||||||||||  ||||||||| ||||||    
T  8229801 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgat 8229702  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||| |  | | | ||||||| ||||||  | ||||||  |||| |||||||||||| |||||    
T  8229701 ttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaagcc 8229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 29439056 - 29438930
Alignment:
Q  37 aaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaa 135  Q
    |||||| |||||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| || | |||||| |||| |||||| || ||||    
T  29439056 aaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 29438957  T
Q  136 tggtaggaccaaaagtgtaatgaagcc 162  Q
    ||  ||||||||||||||||| |||||    
T  29438956 tgcaaggaccaaaagtgtaattaagcc 29438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37505453 - 37505614
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| | ||||    
T  37505453 actaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgc-aaaaacatatagtttatggacgattttgtttgtttta 37505551  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcca 163  Q
    ||| ||||  || || |||| |||||| || |||||   |||||||||| | |||| ||||||    
T  37505552 aaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagcca 37505614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 45048314 - 45048161
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    |||||||||  |||||| ||| ||| |||||||| ||||| | || || ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  45048314 ctaaaactgttatttctatgcgtttctggagttgaaaatatg-aggtaggactaaaactgcaaaaaacatatagtttatggacgattttgttcaatttaa 45048216  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    || || | | ||||||||| | |||| || ||||||  |||||||||||||||||    
T  45048215 aagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 45048161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 30787245 - 30787344
Alignment:
Q  63 aaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||  |  ||||||||||| |||||||||||| |||||    
T  30787245 aaaaaacatatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagcc 30787344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 50926626 - 50926787
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 100  Q
    ||||||||| |||||| ||||  |||||||||||| |||||||| |  | ||||||||||||||||||   |||||||| ||||| |||||||||||||     
T  50926626 actaaaactaccatttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacggttttgttcgatttg 50926725  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    ||| |||  ||||||||||| |||| | || ||||||  | ||||||||||||||| |||||    
T  50926726 aaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagcc 50926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1744488 - 1744398
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgatttt 90  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||    
T  1744488 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgatttt 1744398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 23526815 - 23526665
Alignment:
Q  5 aaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaa 104  Q
    |||||| ||||||||||| ||| |||||||| |||||||| |    ||||||||||||||||||   ||||| || ||| |||||||||||||||||||     
T  23526815 aaactgtcatttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatgattttgttcgatttaaaag 23526716  T
Q  105 agattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaa 155  Q
    ||   ||||||||||| |||| | || ||||||  ||||||||||||||||    
T  23526715 aggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaa 23526665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29021041 - 29020917
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| ||||| ||| ||||| || |||||||||| ||| ||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  29021041 actaaaactgacatttatgtgcgtttttggaggtgaaaatagggag-taacactaaaattgcaaaaaacatgataatttaaggatgattttgttcgattt 29020943  T
Q  100 aaaaaagattggaccattttcatgag 125  Q
    |||| |||   ||||||||| |||||    
T  29020942 aaaagagacatgaccatttttatgag 29020917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 9833549 - 9833635
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||| |||||||| |||||||| | || ||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  9833549 atttctgtgcgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacataatattttagggacgattttgttcgattt 9833635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 50304532 - 50304445
Alignment:
Q  69 catatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||||  |||||||||||||||||||||| || |  |||||||||| |||||| || ||||||  |||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaat 50304445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 29021252 - 29021411
Alignment:
Q  4 aaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaac--atatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||| ||||| ||||| ||| |||||||| |||||||| | ||||||||||||||||||||||    ||| |||| ||||||||||||||||||| |    
T  29021252 aaaactgtcatttatgtgcgtttctggagttgaaaataggggg-taagactaaaactgcaaaaaaccgtgataatttagggacgattttgttcgatttga 29021350  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||    || ||||||| |||| | || ||||||  ||||||||||||| ||| |||||    
T  29021351 aagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagcc 29021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 50304941 - 50304876
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa 68  Q
    ||||| |||||||| ||||  ||||||||||| |||||||||||||| ||||||||||||||||||    
T  50304941 taaaattgccatttttgtgtgtttatggagtttgaaatagggagatatgactaaaactgcaaaaaa 50304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 17088526 - 17088685
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaa 101  Q
    ||||||||| ||||||| ||| ||| | || ||| ||||||| || ||  ||||||||||||||||| |||||||||| ||||| ||||||| ||||| |    
T  17088526 ctaaaactgtcatttctctgcgtttctagatttgaaaatagg-aggtagaactaaaactgcaaaaaatatatagtttagggacggttttgtttgatttga 17088624  T
Q  102 aaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    || ||    |||||||||| |||| |  | ||||||  ||||||||||||||||| |||||    
T  17088625 aagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagcc 17088685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 44291701 - 44291820
Alignment:
Q  6 aactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaa 104  Q
    ||||||||||||| ||  ||| |||||||| |||||||| | || ||||||||||||||||||||| ||||||    ||||||||| ||||||||||||     
T  44291701 aactgccatttctatgtgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacatgatagttaggtgacgattttattcgatttaaaag 44291799  T
Q  105 agattggaccattttcatgag 125  Q
    |||   |||||||||||||||    
T  44291800 agacatgaccattttcatgag 44291820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 45048533 - 45048675
Alignment:
Q  13 atttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattgg 111  Q
    |||||| ||| ||| |||||||| ||||||| || || ||||||||||||||||||||| ||||||| |||||| ||||||||||||  ||| || |  |    
T  45048533 atttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttt-aggacggttttgttcgattggaaagaggtatg 45048630  T
Q  112 accattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||| |||  | || ||||||  |||||||||||||||||    
T  45048631 accattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaat 45048675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30787157 - 30787224
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa 68  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||| ||| |||||||| || ||||||    
T  30787157 actaaaactgtcatttctctgcatttatggagttgaaaatagggaaataggactaaaattgaaaaaaa 30787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 50926393 - 50926236
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataag-actaaaactgcaaaaaacat--atagtttaaggacgattttgttcgat 97  Q
    ||||||||| |||||| ||||  ||| |||||||| ||||||| || |||| ||||||||||||||||| |   |||||||| |||||||||||||||||    
T  50926393 actaaaactaccatttatgtgtgtttctggagttgaaaatagg-aggtaaggactaaaactgcaaaaaaaaatgatagtttagggacgattttgttcgat 50926295  T
Q  98 ttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    || ||| || |  ||  |||||| |||| | || ||||||| |||||||||| ||||||    
T  50926294 ttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaat 50926236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 23526936 - 23527039
Alignment:
Q  22 catttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttca 121  Q
    ||||| |||||||| |||||||| |    ||||||||||||||||||   ||||||||  |||| ||||||||||||||||||||    |||||||||||    
T  23526936 catttttggagttgaaaatagggggcacggactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttca 23527035  T
Q  122 tgag 125  Q
    ||||    
T  23527036 tgag 23527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 44802606 - 44802717
Alignment:
Q  52 actaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaag 150  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  ||| ||| ||    ||||| |||| |||| | || ||||||  |||||||||||    
T  44802606 actaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaag 44802705  T
Q  151 tgtaatgaagcc 162  Q
    |||||| |||||    
T  44802706 tgtaattaagcc 44802717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 17088310 - 17088245
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaa 68  Q
    ||||||||||||||||| ||||||| || ||||| ||||| |||| || |||||||| |||||||||    
T  17088310 ctaaaactgccatttctctgcatttctgaagttgaaaata-ggaggtaggactaaaattgcaaaaaa 17088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 25274863 - 25274766
Alignment:
Q  55 aaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtg 152  Q
    |||| |||||||||||| ||||||| | ||| ||||||||||||| ||| ||    |||||||||| |||| | || ||||||  |||||||||||||    
T  25274863 aaaaatgcaaaaaacatgtagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtg 25274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6551 - 6390
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| ||||||||||| ||| || ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6452  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    |||||| | ||||||||||||||||  | ||||||||||||||||||||| ||| |||||||    
T  6451 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagccat 6390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6776 - 6883
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggaga----taagactaaaactgc-aaaaaacatatagtttaaggacgattttgttcg 95  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||||||    || |||||||||||| ||||||||| ||||||| | |||||||||||||    
T  6776 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6875  T
Q  96 atttaaaa 103  Q
    ||||||||    
T  6876 atttaaaa 6883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 6569 - 6408
Alignment:
Q  3 taaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaa 102  Q
    |||||||| ||||||||||| ||| || ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6470  T
Q  103 aaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagccat 164  Q
    |||||| | ||||||||||||||||  | ||||||||||||||||||||| ||| |||||||    
T  6469 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagccat 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6794 - 6901
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggaga----taagactaaaactgc-aaaaaacatatagtttaaggacgattttgttcg 95  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||||||    || |||||||||||| ||||||||| ||||||| | |||||||||||||    
T  6794 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6893  T
Q  96 atttaaaa 103  Q
    ||||||||    
T  6894 atttaaaa 6901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 46663 - 46814
Alignment:
Q  12 catttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaa-aacatatagtttaaggacgattttgttcgatttaaaaaagattg 110  Q
    ||||| ||||| ||| ||||||||||||||||| ||||  ||||||||| ||||| |||||||||||||| |||||||||||||||||||||| | || |    
T  46663 catttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaaatatatag 46762  T
Q  111 gaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  46763 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 46814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46428 - 46266
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaa-aaaacatatagtttaaggacgattttgttcgattt 99  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  46428 actaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 46329  T
Q  100 aaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||| || | | ||||||||| | |||| || ||||||  ||||||||||||| ||| |||||    
T  46328 aaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagcc 46266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 78478 - 78395
Alignment:
Q  1 actaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggac 84  Q
    ||||||| || ||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  78478 actaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaaacatatagtttagggac 78395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 205754 - 205907
Alignment:
Q  2 ctaaaactgccatttctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 100  Q
    ||||||||||||||||| ||| ||| |||||||| |||||||  | || ||||||||||||||||| ||| |||||||| ||||| |||||||||||||     
T  205754 ctaaaactgccatttctctgcgtttttggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacggttttgttcgatttg 205851  T
Q  101 aaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaat 156  Q
    ||| ||   ||||||||||| |||||| || ||||||  ||||| |||||||||||    
T  205852 aaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaat 205907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 210793 - 210883
Alignment:
Q  72 atagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgtaatgaagcc 162  Q
    |||||||| ||||| ||||||||||||| ||| ||   |||||||||||||||||| || ||||||  ||||||||||||||||| |||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 210883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 504 - 611
Alignment:
Q  55 aaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagattggaccattttcatgagttcgttaaaatggtaggaccaaaagtgta 154  Q
    |||||||||||||||||||||||||  |||  ||||||||||||| ||| ||    |||||||||| |||| |||| ||||||  |||| ||||||||||    
T  504 aaaactgcaaaaaacatatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgta 603  T
Q  155 atgaagcc 162  Q
    || |||||    
T  604 attaagcc 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 159282 - 159390
Alignment:
Q  17 ctgtgcatttatggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagattggacca 115  Q
    |||||| ||| ||||| || |||||||| | || |||||||||||||||||| || |||||||| | ||||||||||||||||| ||| |||   |||||    
T  159282 ctgtgcgtttttggaggtgaaaataggggg-tatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaagagacatgacca 159380  T
Q  116 ttttcatgag 125  Q
    ||||| ||||    
T  159381 ttttcgtgag 159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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