View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15299_high_48 (Length: 274)
Name: NF15299_high_48
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15299_high_48 |
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Alignment Details
Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 16005916 - 16005807
Alignment:
| Q |
149 |
gcacaaatatctctcgggaaagaaactaaagtaaagtcatggaaaaaatatcaaatcaaacttcatcttgttcagcctccagattctgtgcaacttcttc |
248 |
Q |
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| T |
16005916 |
gcacaaatatctcttgggaaagaaactaaagtaaagtcatggcaaaaatatcaaatcaaacttcatcttgttcagcctccagattctgtgcaacttcttc |
16005817 |
T |
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| Q |
249 |
agcttgttct |
258 |
Q |
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|||||||||| |
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| T |
16005816 |
agcttgttct |
16005807 |
T |
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