View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15299_high_52 (Length: 268)
Name: NF15299_high_52
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15299_high_52 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 43148819 - 43148579
Alignment:
| Q |
12 |
agagaagattgaagaatgacagcatgcatgcaaggtgtcacgtgtttattcgcaataataacccaagaaggagtaacatatgggcacatccaaccaaaag |
111 |
Q |
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| T |
43148819 |
agagaagattgaagaatgacagcatgcatgcaaggtgtcacgtgtttattcgcaataataacccaagaaggagtaacatatgggcacatccaaccaaaag |
43148720 |
T |
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| Q |
112 |
tcgacagcacataaatgataaacaccttaaattaaagaaacatgtaacatagacagagggttgaaaagggatggtagttatgtatgtagctgaaaggaaa |
211 |
Q |
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| T |
43148719 |
tcgacagcacataaatgataaacaccttaaattaaagaaacatgtaacatagacagagggttgaaaagggatggtggttatgtatgtagctgaaaggaaa |
43148620 |
T |
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| Q |
212 |
tgaatggctgctatgtagttgaaagaacctgttgtgattaa |
252 |
Q |
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| T |
43148619 |
tgaatggctgctatgtagttgaaagaacctgttgtgattaa |
43148579 |
T |
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