View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15299_high_60 (Length: 232)
Name: NF15299_high_60
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15299_high_60 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 41249653 - 41249839
Alignment:
| Q |
16 |
caaaggccctcaaatccttaaatcccatacctaattttt-tgtgtacaataagcgtatcccatgacaaccagtgaattcctctacgagcagtccctccat |
114 |
Q |
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| T |
41249653 |
caaaggccgtcaaatccttaaatcccatacctaacttttgtgtgtacaataagcgtatcccaagacaaccagtgaattcctctacgagcagtccctccat |
41249752 |
T |
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| Q |
115 |
gatcccacgaaaatgaataaatcatcttctcaatatcatcattaagtgtgataggaagtaggaaaatgctcataacataaggcgaga |
201 |
Q |
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| T |
41249753 |
catcccacgaaaatgaataaatcatcttctcaatatcatcattaagtgtgataggaagtaggataatgctcataacataaggcgaga |
41249839 |
T |
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