View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15299_low_18 (Length: 454)

Name: NF15299_low_18
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15299_low_18
NF15299_low_18
[»] chr7 (23 HSPs)
chr7 (20-197)||(20337177-20337354)
chr7 (259-384)||(20337416-20337544)
chr7 (273-337)||(1471178-1471242)
chr7 (273-338)||(12645797-12645861)
chr7 (275-340)||(22817060-22817125)
chr7 (278-340)||(32351542-32351604)
chr7 (273-338)||(7817756-7817820)
chr7 (273-338)||(35627907-35627972)
chr7 (275-340)||(38656657-38656722)
chr7 (291-339)||(25200200-25200248)
chr7 (151-191)||(32919013-32919053)
chr7 (273-337)||(35600791-35600855)
chr7 (273-333)||(40417893-40417953)
chr7 (290-337)||(6253320-6253367)
chr7 (273-340)||(11352859-11352925)
chr7 (273-340)||(23034391-23034457)
chr7 (273-344)||(47356103-47356174)
chr7 (273-339)||(46022153-46022219)
chr7 (281-342)||(1284541-1284602)
chr7 (273-342)||(39497184-39497253)
chr7 (285-333)||(39110994-39111042)
chr7 (273-333)||(42553017-42553077)
chr7 (273-333)||(46725725-46725785)
[»] chr1 (25 HSPs)
chr1 (275-336)||(31433611-31433672)
chr1 (273-336)||(29706592-29706655)
chr1 (273-338)||(11597756-11597821)
chr1 (273-338)||(27357613-27357678)
chr1 (273-342)||(44517844-44517913)
chr1 (276-339)||(1820992-1821055)
chr1 (276-339)||(37610671-37610734)
chr1 (273-339)||(6949866-6949932)
chr1 (273-337)||(10889934-10889997)
chr1 (273-337)||(13489782-13489845)
chr1 (273-333)||(31975110-31975169)
chr1 (299-334)||(4862311-4862346)
chr1 (273-340)||(29154898-29154964)
chr1 (273-336)||(32158685-32158748)
chr1 (273-332)||(33358051-33358109)
chr1 (294-336)||(41451768-41451810)
chr1 (275-337)||(46281558-46281620)
chr1 (273-333)||(12127983-12128044)
chr1 (296-337)||(32266228-32266269)
chr1 (273-338)||(50328028-50328092)
chr1 (273-338)||(50824861-50824925)
chr1 (279-331)||(16063512-16063564)
chr1 (273-333)||(19947636-19947696)
chr1 (276-336)||(50239053-50239113)
chr1 (273-333)||(51571238-51571298)
[»] chr8 (17 HSPs)
chr8 (275-339)||(24795370-24795434)
chr8 (276-340)||(6445302-6445366)
chr8 (273-340)||(37754681-37754748)
chr8 (273-340)||(40517377-40517444)
chr8 (273-331)||(6182347-6182405)
chr8 (275-337)||(10644689-10644751)
chr8 (290-335)||(2621917-2621962)
chr8 (273-338)||(36969561-36969626)
chr8 (273-332)||(14707236-14707294)
chr8 (276-339)||(25018490-25018553)
chr8 (273-331)||(144150-144208)
chr8 (273-339)||(36885374-36885439)
chr8 (273-334)||(39465614-39465675)
chr8 (273-333)||(2455165-2455225)
chr8 (295-339)||(14863264-14863308)
chr8 (281-337)||(22811405-22811461)
chr8 (273-337)||(30439394-30439457)
[»] chr2 (33 HSPs)
chr2 (273-333)||(20532354-20532414)
chr2 (273-340)||(44050134-44050201)
chr2 (273-337)||(3412442-3412506)
chr2 (273-333)||(44977391-44977451)
chr2 (280-340)||(5054057-5054117)
chr2 (273-337)||(9521927-9521991)
chr2 (273-337)||(14255422-14255486)
chr2 (273-340)||(23352792-23352858)
chr2 (273-340)||(31296657-31296724)
chr2 (273-332)||(44254721-44254779)
chr2 (275-337)||(34134658-34134720)
chr2 (273-341)||(1863775-1863841)
chr2 (273-337)||(32344616-32344680)
chr2 (276-340)||(36436690-36436753)
chr2 (273-345)||(37105758-37105828)
chr2 (285-340)||(3012737-3012792)
chr2 (276-343)||(13765523-13765589)
chr2 (273-332)||(42430769-42430828)
chr2 (273-339)||(3097747-3097813)
chr2 (273-339)||(13333056-13333122)
chr2 (276-334)||(16199603-16199661)
chr2 (273-338)||(1907650-1907715)
chr2 (151-192)||(3723881-3723922)
chr2 (273-338)||(5032043-5032108)
chr2 (273-334)||(14890979-14891040)
chr2 (297-342)||(30220688-30220733)
chr2 (276-333)||(30339756-30339813)
chr2 (273-334)||(36625207-36625268)
chr2 (276-333)||(39147888-39147945)
chr2 (273-338)||(43520977-43521042)
chr2 (273-333)||(28494979-28495039)
chr2 (273-337)||(36643972-36644035)
chr2 (273-333)||(41056639-41056699)
[»] chr4 (42 HSPs)
chr4 (273-340)||(27371260-27371327)
chr4 (32-102)||(20861106-20861176)
chr4 (273-338)||(19174661-19174726)
chr4 (273-340)||(1627440-1627510)
chr4 (273-329)||(24990234-24990290)
chr4 (303-342)||(6520716-6520755)
chr4 (273-339)||(34616680-34616746)
chr4 (273-339)||(39654943-39655009)
chr4 (275-337)||(42815526-42815588)
chr4 (273-338)||(336694-336759)
chr4 (273-342)||(515528-515597)
chr4 (275-340)||(32696673-32696738)
chr4 (273-338)||(50831642-50831707)
chr4 (275-339)||(53796777-53796841)
chr4 (303-338)||(12375864-12375899)
chr4 (273-340)||(17683461-17683527)
chr4 (273-340)||(18767979-18768046)
chr4 (276-342)||(33423461-33423527)
chr4 (273-340)||(35936085-35936152)
chr4 (294-333)||(52431018-52431057)
chr4 (153-191)||(13252537-13252575)
chr4 (273-339)||(24509273-24509339)
chr4 (276-334)||(26148093-26148151)
chr4 (273-339)||(38382440-38382506)
chr4 (273-331)||(45143567-45143624)
chr4 (273-331)||(45152336-45152393)
chr4 (273-339)||(47181960-47182026)
chr4 (273-339)||(48402083-48402149)
chr4 (276-333)||(1797713-1797770)
chr4 (275-340)||(3078792-3078857)
chr4 (275-340)||(12595515-12595580)
chr4 (273-334)||(14603576-14603637)
chr4 (302-335)||(17367215-17367248)
chr4 (273-338)||(22819769-22819833)
chr4 (273-330)||(23662211-23662268)
chr4 (273-338)||(33093003-33093068)
chr4 (273-342)||(42491193-42491262)
chr4 (273-333)||(46038782-46038840)
chr4 (268-348)||(47744389-47744470)
chr4 (151-191)||(12593645-12593685)
chr4 (273-337)||(43769831-43769894)
chr4 (298-342)||(52895401-52895445)
[»] chr6 (20 HSPs)
chr6 (276-328)||(34084526-34084578)
chr6 (273-347)||(25127708-25127782)
chr6 (273-333)||(3552047-3552107)
chr6 (273-333)||(30945933-30945993)
chr6 (273-337)||(30956191-30956255)
chr6 (273-338)||(33019039-33019104)
chr6 (273-337)||(3832583-3832646)
chr6 (273-341)||(26595468-26595536)
chr6 (273-339)||(4820486-4820552)
chr6 (273-339)||(16199569-16199635)
chr6 (273-331)||(30621859-30621917)
chr6 (273-339)||(31883189-31883255)
chr6 (276-338)||(33656893-33656955)
chr6 (273-342)||(10826622-10826691)
chr6 (273-338)||(18141188-18141252)
chr6 (273-333)||(2159197-2159257)
chr6 (273-341)||(6531064-6531131)
chr6 (273-337)||(13143270-13143333)
chr6 (273-333)||(29639203-29639263)
chr6 (273-333)||(29642933-29642993)
[»] chr5 (19 HSPs)
chr5 (273-339)||(24405841-24405907)
chr5 (273-337)||(27546185-27546249)
chr5 (275-339)||(18695440-18695504)
chr5 (275-337)||(6940037-6940099)
chr5 (273-339)||(41175592-41175657)
chr5 (274-330)||(1293013-1293069)
chr5 (275-339)||(9939317-9939381)
chr5 (273-340)||(10649555-10649621)
chr5 (273-332)||(15952938-15952996)
chr5 (273-340)||(33655298-33655365)
chr5 (273-339)||(17626105-17626171)
chr5 (273-338)||(19839873-19839937)
chr5 (150-191)||(34216550-34216591)
chr5 (273-338)||(34546535-34546600)
chr5 (273-338)||(43441858-43441922)
chr5 (150-190)||(7927352-7927392)
chr5 (273-337)||(8675321-8675384)
chr5 (273-341)||(21353263-21353331)
chr5 (273-337)||(36321684-36321748)
[»] chr3 (36 HSPs)
chr3 (273-338)||(52564536-52564601)
chr3 (273-333)||(34627773-34627833)
chr3 (273-341)||(46965984-46966052)
chr3 (280-331)||(11075270-11075321)
chr3 (273-347)||(819091-819165)
chr3 (280-333)||(11056825-11056878)
chr3 (273-334)||(27511844-27511904)
chr3 (273-338)||(54007581-54007646)
chr3 (273-341)||(46965893-46965961)
chr3 (275-337)||(29030694-29030756)
chr3 (273-338)||(55361120-55361185)
chr3 (273-333)||(12762581-12762641)
chr3 (273-329)||(26645146-26645201)
chr3 (273-332)||(6093771-6093830)
chr3 (281-340)||(6178310-6178369)
chr3 (280-339)||(33256435-33256494)
chr3 (273-332)||(39697115-39697173)
chr3 (280-339)||(45205403-45205462)
chr3 (273-340)||(51465799-51465865)
chr3 (285-339)||(6999301-6999355)
chr3 (273-338)||(9158759-9158824)
chr3 (279-333)||(9719340-9719394)
chr3 (273-339)||(21217631-21217697)
chr3 (273-339)||(37056943-37057009)
chr3 (152-190)||(50146487-50146525)
chr3 (273-342)||(13348017-13348086)
chr3 (275-340)||(29573240-29573305)
chr3 (273-337)||(36412243-36412307)
chr3 (273-333)||(45754758-45754819)
chr3 (273-333)||(23155330-23155390)
chr3 (273-333)||(23592577-23592637)
chr3 (273-333)||(23600712-23600772)
chr3 (151-195)||(33256307-33256351)
chr3 (281-333)||(38523294-38523346)
chr3 (273-333)||(42889104-42889164)
chr3 (273-337)||(46965806-46965870)
[»] scaffold0141 (1 HSPs)
scaffold0141 (273-339)||(12052-12117)
[»] scaffold0095 (1 HSPs)
scaffold0095 (273-334)||(22826-22887)
[»] scaffold0005 (1 HSPs)
scaffold0005 (273-334)||(213741-213802)
[»] scaffold0002 (1 HSPs)
scaffold0002 (280-341)||(469520-469581)
[»] scaffold0026 (1 HSPs)
scaffold0026 (344-376)||(101731-101763)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 20337177 - 20337354
Alignment:
Q  20 ttgagaaggtccttaatgttctgtataagaaaaacatacacatgatactgaggaagatcatccttcatgaggttgaccgtgagaaggcaatcatttggac 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20337177 ttgagaaggtccttaatgttctggataagaaaaacatacacatgatactgaggaagatcatccttgatgaggttgaccgcgagaaggcaatcatttggac 20337276  T
Q  120 atttaatctagacacatacaaccatttgcgaaagagaaatgttatttatataatcattttgtgacaatttttatgata 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20337277 atttaatctagacacatacaaccatttgcgaaagagaaatgttatttatataatcattttgtgacaatttttatgata 20337354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 20337416 - 20337544
Alignment:
Q  259 gtcaacacgcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt---aagaaaaagtagaaa 355  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||| |    
T  20337416 gtcaacactcattgttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaaaaaaaaaaagtagaga 20337515  T
Q  356 aagaaaagaattaaataatattcactttt 384  Q
    |||||||||||||||||||||||||||||    
T  20337516 aagaaaagaattaaataatattcactttt 20337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 1471242 - 1471178
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| ||  ||||||||||   |||||||||||||||||||||||||||    
T  1471242 ttctttgtaaatttatggttgtcaaataagttgtctatcaaatagttgttcaaataacacacctc 1471178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 12645861 - 12645797
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||||||||| |||||||||  |||||||||||||||||| ||| |||||    
T  12645861 ttctttgtaaatt-atggttatctcaaaagttgtcaaccaaatagttgttcaaatatcactcctct 12645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 22817060 - 22817125
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||  |||||||| || |||||||||| ||| | ||||||||||||||||||||||||    
T  22817060 ctttgtaaattagtggttatcacaaaagttgtcattcaattggttgttcaaataacacacctcttt 22817125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 32351604 - 32351542
Alignment:
Q  278 tgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||  ||||||||||||||||||||| || |||||| ||| ||| ||||||    
T  32351604 tgtaaatttatggttgactcataagttgtcatacaaatggtagttcaattaatacaactcttt 32351542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 7817756 - 7817820
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| |||||    
T  7817756 ttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctct 7817820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 35627972 - 35627907
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||| |||| |||||||||||||| ||||| |||  || |||||||||||||||||||| ||||    
T  35627972 ttctttataaaattatggttatctcaaaagttatcaatcagatagttgttcaaataacacaactct 35627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 38656657 - 38656722
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||| |||||| || || ||||| |||| ||| | ||||||||||||||||||||||||    
T  38656657 ctttgtaaattaatggttctcacaaaagttatcattcaattggttgttcaaataacacacctcttt 38656722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 25200248 - 25200200
Alignment:
Q  291 ttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||| |||||||||| |  |||||||||||||||||||||||||||||    
T  25200248 ttatcacataagttgttaagcaaatagttgttcaaataacacacctctt 25200200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 32919053 - 32919013
Alignment:
Q  151 aagagaaatgttatttatataatcattttgtgacaattttt 191  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  32919053 aagagaaatgatatttatacaatcattttgtgacaattttt 32919013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 35600791 - 35600855
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||  ||||| || || |||||||||  ||||| |||||||||||||||||||||    
T  35600791 ttctttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacctc 35600855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 40417893 - 40417953
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||| || ||||| ||||| |||||||| || |||||| |||||||||||||||    
T  40417893 ttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacaca 40417953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 6253320 - 6253367
Alignment:
Q  290 gttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| ||||| ||||| ||||||| |||||||    
T  6253320 gttatctcataagttgtcatgcaaatggttgtccaaataatacacctc 6253367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 11352925 - 11352859
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  11352925 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 11352859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 23034391 - 23034457
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| || |  ||||||||| |||||| |||||||||||| | |||||||||    
T  23034391 ttctttgtaaatttatggttgtc-ctgaagttgtcacacaaatggttgttcaaatagcccacctcttt 23034457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 47356103 - 47356174
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaaga 344  Q
    |||||| |||||  |||||| || | ||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  47356103 ttctttataaatcaatggttgtcccgtaagttgtcatacaaatggttgttaaaataacacaactcttaaaga 47356174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 46022219 - 46022153
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  46022219 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 1284541 - 1284602
Alignment:
Q  281 aaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||| || | ||| ||||| ||||| |||| ||||||||||||||||| ||||||||    
T  1284541 aaatttatgattgtatcaaaagttatcataaaaatggttgttcaaataacacaactctttaa 1284602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 39497253 - 39497184
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||| ||| |||||| ||| ||||||| ||||  |||| ||||||||||||||||| ||| ||||    
T  39497253 ttctttgtacattaatggttgtcttataagttatcattgaaatggttgttcaaataacacaactcattaa 39497184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 39110994 - 39111042
Alignment:
Q  285 ttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||| || ||||||||||||||||  ||||| ||||||||||||||||    
T  39110994 ttatgattgtctcataagttgtcattaaaataattgttcaaataacaca 39111042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 42553017 - 42553077
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||| |||||||| ||||| ||||| |||   |||| |||||||||||||||||    
T  42553017 ttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacaca 42553077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 46725725 - 46725785
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||| ||  ||| |||||||||||||||   |||||||| |||||||||||||    
T  46725725 ttctttgtaaatctaaagttgtctcataagttgtcaacaaaatagttattcaaataacaca 46725785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 31433611 - 31433672
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 336  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  31433611 ctttgtaaatctatggttgtctcataagttatcatacaaatagttgttcaaataacacacct 31433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 29706655 - 29706592
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 336  Q
    |||||||||||||||||||||||| | ||||||||| | ||||  |||||||||||||||||||    
T  29706655 ttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacacacct 29706592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 11597756 - 11597821
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||||||||| ||||||| || ||||||||||||  ||||| | ||||||||||||||||||||    
T  11597756 ttctttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacacacctct 11597821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 27357613 - 27357678
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||||||| || | ||| ||||||||| ||||||| || ||||||||||||||||||    
T  27357613 ttctttgtaaatttatgattgtatcaaaagttgtcacacaaatatttattcaaataacacacctct 27357678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 44517913 - 44517844
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    |||||||||||||||| |||||| || ||||| ||| || ||| ||||||||||||||||| ||||||||    
T  44517913 ttctttgtaaatttatagttatcccaaaagttatcacacgaatggttgttcaaataacacaactctttaa 44517844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 1821055 - 1820992
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||| |||| || || |||||||||||||||||| | |||||||||| |||||||||||    
T  1821055 tttgtaaatctatgattgtcacataagttgtcatacaaacaattgttcaaatcacacacctctt 1820992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 37610734 - 37610671
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||||||  ||||||| |||||||| |||| ||| ||||||||||||| |||||    
T  37610734 tttgtaaatttatggttggctcataaattgtcatataaattgttattcaaataacacaactctt 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 6949932 - 6949866
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||||||||  |||||  | ||||||||| ||||||||||||||| ||||||||||||||    
T  6949932 ttctttataaatttatatttatcgtaaaagttgtcacacaaatagttgttcagataacacacctctt 6949866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 10889997 - 10889934
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||    
T  10889997 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcctc 10889934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 13489782 - 13489845
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||    
T  13489782 ttctttgtaaatt-atggttgtcccagaagttgtcaaccaaatagttgttcaaataacactcctc 13489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 31975110 - 31975169
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||| ||| ||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  31975110 ttctttgtaaatctatagttgtcttataagttatcata-aaatagttgttcaaataacaca 31975169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 334
Target Start/End: Complemental strand, 4862346 - 4862311
Alignment:
Q  299 taagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||||||||| |||||||||||||||||||||||    
T  4862346 taagttgtcatataaatagttgttcaaataacacac 4862311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 29154898 - 29154964
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| || ||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  29154898 ttctttgtaaatt-atcgttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 29154964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 32158748 - 32158685
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 336  Q
    ||||||||||||||||| || | || ||||||||||| |||||  | |||||||||||||||||    
T  32158748 ttctttgtaaatttatgattgtttcgtaagttgtcatgcaaatgatcgttcaaataacacacct 32158685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 33358109 - 33358051
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| ||||||||||||||||    
T  33358109 ttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgttcaaataacac 33358051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 41451768 - 41451810
Alignment:
Q  294 tctcataagttgtcatacaaatagttgttcaaataacacacct 336  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  41451768 tctcgtaagttgtcatataaatggttgttcaaataacacacct 41451810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 46281558 - 46281620
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||| ||  ||| ||||||   ||||| |||||||||||||||||||||    
T  46281558 ctttgtaaatttatggttgtcaaatatgttgtctatcaaatggttgttcaaataacacacctc 46281620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 12127983 - 12128044
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtca-tacaaatagttgttcaaataacaca 333  Q
    ||||||| |||| ||||||| || |||||||| ||| ||||||| |||||||||||||||||    
T  12127983 ttctttggaaatctatggttgtcccataagttatcaatacaaatggttgttcaaataacaca 12128044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 32266269 - 32266228
Alignment:
Q  296 tcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||| |||||| ||||||||||||||||||| |||||||    
T  32266269 tcataaggtgtcatgcaaatagttgttcaaataagacacctc 32266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 50328092 - 50328028
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  50328092 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 50328028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 50824861 - 50824925
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| | ||||||||||||   ||||| |||||||||||||||| |||||    
T  50824861 ttctttgtaaatt-atggttgtatcataagttgtccaccaaatggttgttcaaataacactcctct 50824925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 16063564 - 16063512
Alignment:
Q  279 gtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    |||||||||||||| || || || || ||| ||||||||||||||||||||||    
T  16063564 gtaaatttatggttgtcccaaaaattatcacacaaatagttgttcaaataaca 16063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 19947696 - 19947636
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||||  |||||||||||||||    
T  19947696 ttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacaca 19947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 50239113 - 50239053
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacct 336  Q
    ||||||||||  ||||| || || |||||||||  ||||| ||||||||||||||||||||    
T  50239113 tttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacct 50239053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 51571298 - 51571238
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||| |||||||| || || || ||||||  ||||| |||||||||||||||||    
T  51571298 ttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacaca 51571238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 24795370 - 24795434
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  24795370 ctttataaatttatggttgtctcataagttgtcaaacaaatagttgttcaaataacatacctctt 24795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 6445302 - 6445366
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||||||| || ||||||||||||  ||||| || |||||||||||||| ||||||    
T  6445302 tttgtaaatttatggttgtcccataagttgtcaatcaaatggtcgttcaaataacacatctcttt 6445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 37754681 - 37754748
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||  ||| |  || |||||||||||||||| |||||| |||||||||||||||||    
T  37754681 ttctttgtaaatttaaagttgttccaaaagttgtcatacaaatggttgtttaaataacacacctcttt 37754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 40517377 - 40517444
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| ||| ||||| ||||||| ||||  |||||||||||| |||| |||||    
T  40517377 ttctttgtaaatttatggttgtcttataagatgtcataaaaatgattgttcaaataatacacatcttt 40517444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 6182347 - 6182405
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    |||||| ||||||||| ||| ||  |||| |||||||||||||||||||||||||||||    
T  6182347 ttctttataaatttattgttgtccaataaattgtcatacaaatagttgttcaaataaca 6182405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 10644751 - 10644689
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||    
T  10644751 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 10644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 2621917 - 2621962
Alignment:
Q  290 gttatctcataagttgtcatacaaatagttgttcaaataacacacc 335  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||    
T  2621917 gttacctcataagttgtcatacaaatgattgttcaaataacacacc 2621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 36969626 - 36969561
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||||||||  ||||||| || |||||||||||| |||||| | ||||||||||||||| ||||    
T  36969626 ttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactct 36969561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 14707294 - 14707236
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||||| ||| || ||||||||||||||   ||||||||||||||||||||||    
T  14707294 ttctttgtaaatt-atgattgtctcataagttgtccaccaaatagttgttcaaataacac 14707236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 25018490 - 25018553
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||| || ||  |||| ||||| |||||||| ||||||||||||||||| ||||    
T  25018490 tttgtaaatttatgattgtcatataaattgtcttacaaataattgttcaaataacacacatctt 25018553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 144208 - 144150
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    ||||||||||||||||||||||| || || || ||||| |||| |||||| ||||||||    
T  144208 ttctttgtaaatttatggttatcacaaaaattatcatagaaatggttgttgaaataaca 144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 36885439 - 36885374
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||||| |||||| || |||||||||||   ||||| |||||||||||||||| ||||||    
T  36885439 ttctttgtaaatt-atggttgtcccataagttgtccaccaaatggttgttcaaataacactcctctt 36885374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 39465614 - 39465675
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||| ||| ||||||||| | ||| ||||||||  | |||||||||||||||||||||||    
T  39465614 ttctttataattttatggttgtttcaaaagttgtctcataaatagttgttcaaataacacac 39465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 2455165 - 2455225
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||| || ||||||  ||||  |||| ||||||||||||| |||||||||||||||||    
T  2455165 ttctttgaaattttatgagtatccaataaattgtcatacaaattgttgttcaaataacaca 2455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 14863264 - 14863308
Alignment:
Q  295 ctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||| ||||||||  |||||| |||||||||||||||||||||||    
T  14863264 ctcaaaagttgtcccacaaatggttgttcaaataacacacctctt 14863308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 22811461 - 22811405
Alignment:
Q  281 aaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||| ||| | | ||||||||||||||  ||||| ||||||||||||||    
T  22811461 aaatttatggttgtcttaaaggttgtcatacaaattattgtttaaataacacacctc 22811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 30439457 - 30439394
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || |||||||| |||  ||||| |||||||||||||||| ||||    
T  30439457 ttctttgtaaatt-atggttgtcacataagttatcaaccaaatggttgttcaaataacactcctc 30439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 20532414 - 20532354
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20532414 ttctttataaatttatggttatcccataagttatcatacaaatagttgttcaaataacaca 20532354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 44050134 - 44050201
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| ||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  44050134 ttctttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacacacctcttt 44050201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 3412506 - 3412442
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| | ||| ||||||||| | ||||||||||||||| ||||||||||    
T  3412506 ttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacacacctc 3412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 44977451 - 44977391
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||||||||| ||||||||||| || | ||||| |||||||||||||||||    
T  44977451 ttctttgtaaatttatggttgtctcataagttttcgttcaaatggttgttcaaataacaca 44977391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 5054117 - 5054057
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| ||||| ||||||||||| |||||||| || |||||||||| ||||||    
T  5054117 taaatttatggttgtctcaaaagttgtcatataaatagttttttaaataacacaactcttt 5054057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 9521927 - 9521991
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| ||||| ||||| ||| |||||||  | |||||||||||||||||    
T  9521927 ttctttgtaaatttatggttgtctcaaaagttatcacacaaataaatattcaaataacacacctc 9521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 14255422 - 14255486
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| || || ||||||||  | |||| |||||||||||||||||||||    
T  14255422 ttctttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacacacctc 14255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 23352858 - 23352792
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  23352858 ttctttgtaaatt-atggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 23352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 31296657 - 31296724
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| ||  | ||||||||| || ||| ||||||||||||||||| ||||||    
T  31296657 ttctttgtaaatttatggttgtcataaaagttgtcacactaatggttgttcaaataacacatctcttt 31296724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 44254721 - 44254779
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  44254721 ttctttgtaaatt-atggttatcccataagttgtcaatcaaatggttgttcaaataacac 44254779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 34134720 - 34134658
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||    
T  34134720 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 34134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 1863775 - 1863841
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    |||||||||||||||||||| ||||| |||||| |  |||||| |||||||||  ||||||||||||||    
T  1863775 ttctttgtaaatttatggttgtctcaaaagttgcc--acaaatggttgttcaagcaacacacctcttta 1863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 32344616 - 32344680
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||||||||||||   | || |||||| |||||||  |||||||||||||||||||    
T  32344616 ttctttgtaaatttatggttattctaaaaattgtcacacaaataactgttcaaataacacacctc 32344680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 36436753 - 36436690
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||  ||||||||||| ||||||| | ||||||||||| ||| ||||||    
T  36436753 tttgtaaatttatggttataccataagttgtcttacaaattg-tgttcaaataatacaactcttt 36436690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 37105758 - 37105828
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaa 345  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||| ||||||||    
T  37105758 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcct-tttaagaa 37105828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 3012792 - 3012737
Alignment:
Q  285 ttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  3012792 ttatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctcttt 3012737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 13765523 - 13765589
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaag 343  Q
    |||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| ||||||||||    
T  13765523 tttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctctttaag 13765589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 42430769 - 42430828
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||| |||||||| |  || ||||||||| |||||| ||||||||||||||||    
T  42430769 ttctttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttcaaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 3097813 - 3097747
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  3097813 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 13333122 - 13333056
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  13333122 ttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 16199661 - 16199603
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    ||||||||||||||||| |  ||||| || ||||||||||| || ||||||||||||||    
T  16199661 tttgtaaatttatggttgtaccataaattatcatacaaataattattcaaataacacac 16199603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 1907715 - 1907650
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||||||||||||||||| ||  | ||||||||||  ||||  |||||||||||||||| ||||    
T  1907715 ttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaactct 1907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 3723881 - 3723922
Alignment:
Q  151 aagagaaatgttatttatataatcattttgtgacaattttta 192  Q
    |||| ||||| |||||||||||| ||||||||||||||||||    
T  3723881 aagaaaaatgatatttatataatgattttgtgacaattttta 3723922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 5032043 - 5032108
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||||||||||||||||| ||  ||||||||||   ||||  ||||||||||||||||| ||||    
T  5032043 ttctttgtaaatttatggttgtcaaataagttgtctatcaaaaggttgttcaaataacacatctct 5032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 14891040 - 14890979
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||||||||| ||||||| |  |||||||||| |  ||||| ||||||||||||||||||    
T  14891040 ttctttgtaaatctatggttgttccataagttgttaatcaaatggttgttcaaataacacac 14890979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 30220733 - 30220688
Alignment:
Q  297 cataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||||| || ||||||| |||||||||||| ||||||||||    
T  30220733 cataagttgtcctaaaaatagtggttcaaataacatacctctttaa 30220688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 30339813 - 30339756
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||| |||||||| || ||||||||||| ||||  |||| |||||||||||||||||    
T  30339813 tttgttaatttatgattgtctcataagttctcatttaaatggttgttcaaataacaca 30339756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 36625207 - 36625268
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||| ||||||||||||||| ||| | |  |||||||||||||| || ||||||||||||||    
T  36625207 ttctctgtaaatttatggttgtcttaaatattgtcatacaaataattattcaaataacacac 36625268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 39147888 - 39147945
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||| || || || ||||||||||  |||| |||||||||||||||||    
T  39147888 tttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 43520977 - 43521042
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| ||| ||| ||||||||  ||||  |||||||||||||| ||||||    
T  43520977 ttctttgtaaattgatggttgtcttataggttgtcatgtaaatgattgttcaaataacatacctct 43521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 28494979 - 28495039
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||| ||||||||||||||| || || ||||||| ||  |||| |||||||||||||||||    
T  28494979 ttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacaca 28495039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 36644035 - 36643972
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || ||||| ||||||  ||||| |||||||||||||||| ||||    
T  36644035 ttctttgtaaatt-atggttgtcccataaattgtcaaccaaatggttgttcaaataacactcctc 36643972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 41056699 - 41056639
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  41056699 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 41056639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 27371260 - 27371327
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| ||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  27371260 ttctttgtaaatttatggttgtctcataagttctcaaataaattgttgttcaaataacacacctcttt 27371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 20861176 - 20861106
Alignment:
Q  32 ttaatgttctgtataagaaaaacatacacatgatactgaggaagatcatccttcatgaggttgaccgtgag 102  Q
    ||||||||||| ||||||| |||||| ||||| |||| ||||||||||||||| |||||||||||||||||    
T  20861176 ttaatgttctgaataagaacaacataaacatggtactaaggaagatcatccttgatgaggttgaccgtgag 20861106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 19174726 - 19174661
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||||||| || ||||| ||||||||| |||| | ||||||||||||||||| ||||    
T  19174726 ttctttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacacatctct 19174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 1627510 - 1627440
Alignment:
Q  273 ttctttgtaaatttatggttatctcat---aagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||||| || ||    |||||||||| ||||||||||||||||||||||| ||||||    
T  1627510 ttctttgtaaatttatggttgtcacaacaaaagttgtcatccaaatagttgttcaaataacacaactcttt 1627440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 24990234 - 24990290
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataa 329  Q
    |||||||||||||||||||| || |||||||||||||||||||  || |||||||||    
T  24990234 ttctttgtaaatttatggttgtcccataagttgtcatacaaatgattattcaaataa 24990290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 6520755 - 6520716
Alignment:
Q  303 ttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  6520755 ttgtcatacaaatggttgttcaaataacacacctctttaa 6520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 34616680 - 34616746
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  34616680 ttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 39654943 - 39655009
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||||||||| ||| | || || ||||  |||||||||||||||||||||| |||||    
T  39654943 ttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaactctt 39655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 42815526 - 42815588
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||    
T  42815526 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 42815588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 336759 - 336694
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||| ||||| |||||| | ||| ||||||||||| ||| |||||||||||||||||| ||||    
T  336759 ttctttgcaaattaatggttgtatcaaaagttgtcataaaaaaagttgttcaaataacacaactct 336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 515597 - 515528
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    |||||| |||||||||| |||| ||| ||||||||||| |||||  | ||||||||||||| ||||||||    
T  515597 ttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaactctttaa 515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 32696738 - 32696673
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||| |   |||| ||||||  ||||| ||||||||||||||||||||||||    
T  32696738 ctttgtaaatttatggttgtacaataaattgtcaaccaaatggttgttcaaataacacacctcttt 32696673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 50831707 - 50831642
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||| |||||||| || || |||||||||  ||||| ||||||||||||||||| ||||    
T  50831707 ttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactct 50831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 53796777 - 53796841
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||  ||||| || || |||||||||| ||| ||||||||||||||||||| |||||    
T  53796777 ctttgtaaattagtggttgtcacaaaagttgtcattcaattagttgttcaaataacacagctctt 53796841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 338
Target Start/End: Complemental strand, 12375899 - 12375864
Alignment:
Q  303 ttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12375899 ttgtcatacaaatggttgttcaaataacacacctct 12375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 17683461 - 17683527
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  17683461 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 17683527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 18767979 - 18768046
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||| ||||||||||||| ||| | ||||| ||| ||||||| ||||| ||||||||||| |||||    
T  18767979 ttctttataaatttatggttgtcttaaaagttatcacacaaataattgtttaaataacacacatcttt 18768046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 33423461 - 33423527
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgt-catacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||||||||||||||  ||||||||| |||| |||| ||||| ||||||||||| ||||||||    
T  33423461 tttgtaaatttatggttatcaaataagttgtccata-aaatggttgtgcaaataacacatctctttaa 33423527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 35936085 - 35936152
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||| ||| ||||||| ||  | ||||||||| ||||||  |||||||||||||||||||||||    
T  35936085 ttctttgtgaatgtatggttgtcctaaaagttgtcacacaaatgattgttcaaataacacacctcttt 35936152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 333
Target Start/End: Original strand, 52431018 - 52431057
Alignment:
Q  294 tctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  52431018 tctcataggttgtcatacaaatggttgttcaaataacaca 52431057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 13252537 - 13252575
Alignment:
Q  153 gagaaatgttatttatataatcattttgtgacaattttt 191  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  13252537 gagaaatgatatttatataatcattttgtgataattttt 13252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 24509339 - 24509273
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||  ||||| || || || || |||  |||||||||||||||||||||||||||||    
T  24509339 ttctttgtaaattagtggttgtcacaaaaattatcactcaaatagttgttcaaataacacacctctt 24509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 26148151 - 26148093
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    ||||||||| ||||||| | | ||||||||| |||||||| ||||||||||||| ||||    
T  26148151 tttgtaaatctatggttgttttataagttgttatacaaatggttgttcaaataaaacac 26148093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 38382440 - 38382506
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  38382440 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 45143624 - 45143567
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||    
T  45143624 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatagttgttcaaataaca 45143567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 45152393 - 45152336
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||    
T  45152393 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatagttgttcaaataaca 45152336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 47181960 - 47182026
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  47181960 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 48402149 - 48402083
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  48402149 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 1797770 - 1797713
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||| |||| || |||| ||||||||||| ||||| || ||||||||||||||    
T  1797770 tttgtaaatctatgattgtctcgtaagttgtcattcaaatggtagttcaaataacaca 1797713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 3078857 - 3078792
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||| ||  ||||||||||   |||||  |||||||||||| ||||||||||    
T  3078857 ctttgtaaatttatggttgtcaaataagttgtctatcaaatgattgttcaaataagacacctcttt 3078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 12595580 - 12595515
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||| ||||||||||||| || || || |||||||  |||| ||||||||||||||||| ||||||    
T  12595580 ctttataaatttatggttgtcccaaaaattgtcatcaaaatggttgttcaaataacacatctcttt 12595515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 14603576 - 14603637
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||| ||||||||||||| ||||| || |||||||  ||||  |||||||||||||||||    
T  14603576 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacacac 14603637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 17367215 - 17367248
Alignment:
Q  302 gttgtcatacaaatagttgttcaaataacacacc 335  Q
    ||||||| ||||||||||||||||||||||||||    
T  17367215 gttgtcacacaaatagttgttcaaataacacacc 17367248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 22819769 - 22819833
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  22819769 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 22819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 23662268 - 23662211
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataac 330  Q
    |||||||||||||||||||||||  |||| ||||||   |||| ||||||||||||||    
T  23662268 ttctttgtaaatttatggttatcaaataaattgtcaattaaatggttgttcaaataac 23662211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 33093068 - 33093003
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |   || ||||||||||| || || |||| ||||||||||||||||||||||    
T  33093068 ttctttgtaaattaactattgtctcataagttatcgtataaatggttgttcaaataacacacctct 33093003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 42491193 - 42491262
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    |||||||| || |||||||| || || |||||||||  ||||| ||||||||||||||||| ||| ||||    
T  42491193 ttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactccttaa 42491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 46038782 - 46038840
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||||||||| |||||  | ||||||||||  ||||| ||||||||||||||||    
T  46038782 ttctttgtaaatttatgattatcataaaagttgtcat--aaataattgttcaaataacaca 46038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 47744470 - 47744389
Alignment:
Q  268 cattgttctttgtaaatttatggttatctcataagttgtcatacaaa-tagttgttcaaataacacacctctttaagaaaaa 348  Q
    |||| ||||||||||| |||||||| || || ||||| |||  |||| ||||||||||||||||||| ||||| || |||||    
T  47744470 catttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacacaactcttaaaaaaaaa 47744389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 12593685 - 12593645
Alignment:
Q  151 aagagaaatgttatttatataatcattttgtgacaattttt 191  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  12593685 aagagaaatgatatttatataattattttttgacaattttt 12593645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 43769831 - 43769894
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || |||||||| |||   ||||||||||||||||||||| ||||    
T  43769831 ttctttgtaaatt-atggttgtcgcataagttatcaacaaaatagttgttcaaataacactcctc 43769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 52895401 - 52895445
Alignment:
Q  298 ataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    |||||||||||  ||||| ||||||||||||||||| ||||||||    
T  52895401 ataagttgtcaatcaaatggttgttcaaataacacaactctttaa 52895445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 34084578 - 34084526
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaata 328  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  34084578 tttgcaaatttatggttgtctcataagttgtcatacaaatagttgttcaaata 34084526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 25127782 - 25127708
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaaaa 347  Q
    |||||||||||||||||||| || || || |||||  |||||| |||||||||||||||||||||| ||| ||||    
T  25127782 ttctttgtaaatttatggttgtcccagaatttgtcgcacaaatggttgttcaaataacacacctctataataaaa 25127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 3552107 - 3552047
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||||||||| ||||| || ||||| |||| ||||| |||||||||||||||||    
T  3552107 ttctttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacaca 3552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 30945933 - 30945993
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||| ||||||| |  |||||||| |||||||||| |||||||||||||||||    
T  30945933 ttctttgtaaatctatggttgttccataagttttcatacaaatggttgttcaaataacaca 30945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 30956191 - 30956255
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||| ||||||| || |||||||| ||||| |||| ||||||||||||||| |||||    
T  30956191 ttctttgtaaatctatggttgtcccataagttttcatataaatggttgttcaaataacaaacctc 30956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 33019104 - 33019039
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||| |||| |||| |||||| |||| |||| |||||||||||| |||||||||| |||||||    
T  33019104 ttctttgcaaatctatgattatcttataaattgttatacaaatagtttttcaaataactcacctct 33019039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 3832583 - 3832646
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| ||||    
T  3832583 ttctttgtaaatt-atggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctc 3832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 26595468 - 26595536
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||| || ||||| | ||| ||||||||||| |||| | ||||||||||||||| |||||||    
T  26595468 ttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttta 26595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 4820486 - 4820552
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||| || || || ||||| ||||| ||||  |||||||||||||||||||||| |||||    
T  4820486 ttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 16199569 - 16199635
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  16199569 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 30621859 - 30621917
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    |||||||||||| |||||||||  |||||||| |||  ||||| |||||||||||||||    
T  30621859 ttctttgtaaatatatggttattccataagttatcaatcaaatggttgttcaaataaca 30621917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 31883255 - 31883189
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||| |||||||| || || || ||||||  ||||||||||||||||||| ||| |||||    
T  31883255 ttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataatacaactctt 31883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 33656893 - 33656955
Alignment:
Q  276 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||||||| ||  |||| ||||||  ||||| ||||||||||||||||| ||||    
T  33656893 tttgtaaatttatggttgtcaaataaattgtcaatcaaatggttgttcaaataacacatctct 33656955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 10826622 - 10826691
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    |||||||||||||  ||||| || || ||||| |||  ||||| |||||||||||||||||| |||||||    
T  10826622 ttctttgtaaattagtggttgtcacaaaagttatcactcaaatggttgttcaaataacacacttctttaa 10826691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 18141252 - 18141188
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||    
T  18141252 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctct 18141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 2159257 - 2159197
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||||||||| |  |||||||| ||||||| ||  ||||| ||||||||||    
T  2159257 ttctttgtaaatttatggttgttccataagttatcatacacatgattgtttaaataacaca 2159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 6531131 - 6531064
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||||| |||||| || ||| |||| |||  ||||| |||||||||||||||| ||||||||    
T  6531131 ttctttgtaaatt-atggttgtcccattagttatcaaccaaatggttgttcaaataacactcctcttta 6531064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 13143333 - 13143270
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| ||||    
T  13143333 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 13143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 29639263 - 29639203
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||| |||  |||| |||||  |||| |||||| |||||||||||||||||||    
T  29639263 ttctttgtaaatctataattatatcatatattgttatacaattagttgttcaaataacaca 29639203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 29642993 - 29642933
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||| |||  |||| |||||  |||| |||||| |||||||||||||||||||    
T  29642993 ttctttgtaaatctataattatatcatatattgttatacaattagttgttcaaataacaca 29642933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 24405907 - 24405841
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||||| ||| | ||| ||||||||| ||||||||||||||||||||||||| ||||    
T  24405907 ttctttgtaaatttatagttgtttcaaaagttgtcaaacaaatagttgttcaaataacacacttctt 24405841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 27546185 - 27546249
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||| ||||||| || ||||| ||||||||| |||||||||| |||||||||||||||||    
T  27546185 ttctttgtacatttatgattgtctcaaaagttgtcacacaaatagttattcaaataacacacctc 27546249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 18695440 - 18695504
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||||    
T  18695440 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctctt 18695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 6940099 - 6940037
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||| ||  ||||||||||   ||||| |||||||||||||||||||||    
T  6940099 ctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 6940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 41175657 - 41175592
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| |||||||||||||||| ||||||    
T  41175657 ttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctctt 41175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 1293069 - 1293013
Alignment:
Q  274 tctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataac 330  Q
    ||||||||||||||||||| ||  | |||||||||||||||| ||| ||||||||||    
T  1293069 tctttgtaaatttatggttgtccaaaaagttgtcatacaaatggttattcaaataac 1293013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 9939381 - 9939317
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||||||||||| ||  |||| |||||   ||||| |||||||||||||||||||||||    
T  9939381 ctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgttcaaataacacacctctt 9939317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 10649555 - 10649621
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  10649555 ttctttgtaaatt-atggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 10649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 15952996 - 15952938
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| ||||||||||||||||    
T  15952996 ttctttgtaaatt-atggttgtcacataagttgtcaaccaaatggttgttcaaataacac 15952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 33655365 - 33655298
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||| ||||||||||||| |  || ||||| ||||| |||||||| ||||||||||||| ||||||    
T  33655365 ttctttataaatttatggttgtaccaaaagttatcataaaaatagttattcaaataacacaactcttt 33655298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 17626105 - 17626171
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  17626105 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 19839937 - 19839873
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || || ||||| |||  |||||||||||||||||||||| |||||    
T  19839937 ttctttgtaaatt-atggttgtcccaaaagttatcaaccaaatagttgttcaaataacacgcctct 19839873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 34216591 - 34216550
Alignment:
Q  150 aaagagaaatgttatttatataatcattttgtgacaattttt 191  Q
    ||||| ||||| |||||||||||| |||||||||||||||||    
T  34216591 aaagaaaaatgatatttatataattattttgtgacaattttt 34216550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 34546535 - 34546600
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||| || |||||| ||| || || || |||||||||||| |||||||||||||||||| ||||    
T  34546535 ttctttatacatttatagttgtcccaaaaattgtcatacaaaaagttgttcaaataacacaactct 34546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 43441858 - 43441922
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| ||| | |||||||||  ||||| |||||||||||||||| |||||    
T  43441858 ttctttgtaaatt-atggttgtcttaaaagttgtcaaccaaatggttgttcaaataacactcctct 43441922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 7927352 - 7927392
Alignment:
Q  150 aaagagaaatgttatttatataatcattttgtgacaatttt 190  Q
    ||||||||||| |||||||| ||||||||||||| ||||||    
T  7927352 aaagagaaatgatatttatacaatcattttgtgataatttt 7927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 8675384 - 8675321
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| ||||    
T  8675384 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 8675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 21353263 - 21353331
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||| |||||||| || || |||||||||  ||||| |||||| ||||||| || |||||||    
T  21353263 ttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataactcaactcttta 21353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 36321748 - 36321684
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||| ||||||| |   ||||||||| |  ||||| |||||||||||||||||||||    
T  36321748 ttctttgtaaatctatggtttttcaataagttgttaatcaaatggttgttcaaataacacacctc 36321684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 52564601 - 52564536
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||| ||||||    
T  52564601 ttctttgtaaatctatggttgtcccataagttgtcatagaaatggttgttcaaataacatacctct 52564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 34627833 - 34627773
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||||| ||||||||||||||||    
T  34627833 ttctttgtaaatttatggttgtcttataagttatcataaaaataattgttcaaataacaca 34627773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 46966052 - 46965984
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||||||||| || ||  | ||||||||| |||||| |||||||||||||||||||||||||    
T  46966052 ttctttgtaaatttatgattgtccgaaaagttgtcacacaaatggttgttcaaataacacacctcttta 46965984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 11075321 - 11075270
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataaca 331  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  11075321 taaatttatggttgtctcaaaagttgtcatacaaatggttgttcaaataaca 11075270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 819165 - 819091
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaagaaaa 347  Q
    ||||||||||||| ||| |||||||| ||||||||||  |||| |||||| |||||||||| ||||||| |||||    
T  819165 ttctttgtaaattaatgattatctcaaaagttgtcatcaaaatggttgtttaaataacacatctctttatgaaaa 819091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 11056878 - 11056825
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||    
T  11056878 taaatttatggttgtctcaaaagttgttatacaaatggttgttcaaataacaca 11056825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 27511844 - 27511904
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||||||||||||||||| || || ||||||||| |||||| ||||||||||||||||||    
T  27511844 ttctttgtaaatttatggttgtc-caaaagttgtcacacaaattgttgttcaaataacacac 27511904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 54007581 - 54007646
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    |||||| ||||||||||||| ||| ||||||||||||||| || || ||||||||||||| |||||    
T  54007581 ttctttataaatttatggttgtcttataagttgtcatacagatggtcgttcaaataacacgcctct 54007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 46965961 - 46965893
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||||||||| || ||  | ||||||||| |||||| ||||||||||||||||| |||||||    
T  46965961 ttctttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacacatctcttta 46965893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 29030756 - 29030694
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||  ||| |||| || |||||||||  |||||||||||||||||||||||||||    
T  29030756 ctttgtaaattagtggctatcacaaaagttgtcactcaaatagttgttcaaataacacacctc 29030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 55361185 - 55361120
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 338  Q
    ||||||||||||  |||||| || |||||||| |||| ||||||||||||||||||| ||| ||||    
T  55361185 ttctttgtaaatcaatggttgtcacataagttttcattcaaatagttgttcaaataaaacaactct 55361120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 12762641 - 12762581
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||||||||| || ||||| |||||||  ||||  ||||||||||||||||    
T  12762641 ttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgttcaaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 26645146 - 26645201
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataa 329  Q
    ||||||||||||| ||| ||||| ||||| ||||||| |||||||||||||||||||    
T  26645146 ttctttgtaaatt-atgattatcccataaattgtcatccaaatagttgttcaaataa 26645201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 6093830 - 6093771
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||| |||| ||||||||||  ||||||||||| | |||||||| ||||||||||||    
T  6093830 ttctttgaaaatatatggttatccaataagttgtcaaataaatagtttttcaaataacac 6093771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 6178369 - 6178310
Alignment:
Q  281 aaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||| | ||  ||||||||||| |||| ||||||||||||||||| ||||||    
T  6178369 aaatttatggttgtatcgaaagttgtcataaaaatggttgttcaaataacacaactcttt 6178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 33256435 - 33256494
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||||| ||  | ||||||||| |||||| ||||||||||||||||| |||||    
T  33256435 taaatttatggttgtcctaaaagttgtcacacaaatggttgttcaaataacacatctctt 33256494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 39697173 - 39697115
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacac 332  Q
    ||||||||||||| |||||| || || |||||||||  ||||||||||||||||||||||    
T  39697173 ttctttgtaaatt-atggttgtcccaaaagttgtcaatcaaatagttgttcaaataacac 39697115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 45205403 - 45205462
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||||  || ||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  45205403 taaatttataattgtctcaaaagttgtcacacaaatggttgttcaaataatacacctctt 45205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 51465865 - 51465799
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    ||||||||||||| |||||| || || |||||||||  ||||| |||||||||||||||| |||||||    
T  51465865 ttctttgtaaatt-atggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttt 51465799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 6999301 - 6999355
Alignment:
Q  285 ttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||||| || ||||||||||||  ||||| |||||||||||||||| ||||||    
T  6999301 ttatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctctt 6999355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 9158824 - 9158759
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaat-agttgttcaaataacacacctct 338  Q
    ||||||||||||| |||||| || ||||||||||||  ||||| ||||||||||||||||| |||||    
T  9158824 ttctttgtaaatt-atggttgtcacataagttgtcaaccaaattagttgttcaaataacactcctct 9158759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 9719394 - 9719340
Alignment:
Q  279 gtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||| ||||||||||| || |||||||||  ||||| |||||||||||||||||    
T  9719394 gtaaaattatggttatcccaaaagttgtcaatcaaatggttgttcaaataacaca 9719340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 21217631 - 21217697
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  21217631 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 37057009 - 37056943
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||| |  ||||| ||||| ||||||||||| |||| | ||||||||||||||| |||||    
T  37057009 ttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 50146487 - 50146525
Alignment:
Q  152 agagaaatgttatttatataatcattttgtgacaatttt 190  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  50146487 agagaaatgatatttgtataatcattttgtgacaatttt 50146525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 13348086 - 13348017
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaa 342  Q
    ||||||||||| || ||||| || || ||||||||||| |||| | ||||||||||||| | ||||||||    
T  13348086 ttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactctttaa 13348017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 29573305 - 29573240
Alignment:
Q  275 ctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttt 340  Q
    |||||||||||||||||| ||  |||| |||||   ||||| ||||||||||||||| ||||||||    
T  29573305 ctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgttcaaataacatacctcttt 29573240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 36412243 - 36412307
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatac-aaatagttgttcaaataacacacctc 337  Q
    ||||||||||||| |||||| || |||||||||||| || |||| |||||||||||||||| ||||    
T  36412243 ttctttgtaaatt-atggttgtcccataagttgtcaaaccaaatggttgttcaaataacactcctc 36412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 45754758 - 45754819
Alignment:
Q  273 ttctttgtaaattt-atggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||||||||||| |||||| ||| ||||||| |||  ||||| |||||||||||||||||    
T  45754758 ttctttgtaaattttatggttgtctaataagttatcaatcaaatggttgttcaaataacaca 45754819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 23155390 - 23155330
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||| ||||| |||||| | ||||| |||   ||||||||||||||||||||||    
T  23155390 ttctttgtaaaattatgattatcttaaaagttatcaattaaatagttgttcaaataacaca 23155330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 23592577 - 23592637
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  23592577 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 23592637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 23600712 - 23600772
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    |||||| |||| || ||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  23600712 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacaca 23600772  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 33256307 - 33256351
Alignment:
Q  151 aagagaaatgttatttatataatcattttgtgacaatttttatga 195  Q
    |||||||||| |||||||| || ||||||| ||||||||||||||    
T  33256307 aagagaaatgatatttatacaaccattttgagacaatttttatga 33256351  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 38523294 - 38523346
Alignment:
Q  281 aaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||||||  ||||| || || ||||||| |||||||||||||||||    
T  38523294 aaatttatggttattccataaattatcgtacaaatggttgttcaaataacaca 38523346  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 42889104 - 42889164
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 333  Q
    ||||||||||| || ||||||| ||| ||||||||||  |||||| |||| ||||||||||    
T  42889104 ttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacaca 42889164  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 46965870 - 46965806
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctc 337  Q
    |||||||||||||||||||| ||  | ||||||||| ||||||  | ||| ||||||||||||||    
T  46965870 ttctttgtaaatttatggttgtcctaaaagttgtcacacaaatgatcgtttaaataacacacctc 46965806  T

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Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 12052 - 12117
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctt 339  Q
    ||||||||||||| |||||| || || |||||||||  |||||||||||||||||||||| ||||||    
T  12052 ttctttgtaaatt-atggttgtcgcaaaagttgtcaaccaaatagttgttcaaataacactcctctt 12117  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 22887 - 22826
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||| ||| ||||||||| | ||| ||||||||  | |||||||||||||||||||||||    
T  22887 ttctttataattttatggttgtttcaaaagttgtctcataaatagttgttcaaataacacac 22826  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 213802 - 213741
Alignment:
Q  273 ttctttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacac 334  Q
    |||||| ||||||||||||| ||||| || |||||||  ||||  |||||||||||||||||    
T  213802 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacacac 213741  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 469581 - 469520
Alignment:
Q  280 taaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctcttta 341  Q
    ||||||||||||| |  || || || |||| ||||||||||||||||||||||| |||||||    
T  469581 taaatttatggtttttacaaaaattatcatccaaatagttgttcaaataacacaactcttta 469520  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 376
Target Start/End: Original strand, 101731 - 101763
Alignment:
Q  344 aaaaagtagaaaaagaaaagaattaaataatat 376  Q
    ||||||||||||||||||||| |||||||||||    
T  101731 aaaaagtagaaaaagaaaagagttaaataatat 101763  T

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