View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15299_low_26 (Length: 408)
Name: NF15299_low_26
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15299_low_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 16 - 408
Target Start/End: Original strand, 34861441 - 34861833
Alignment:
| Q |
16 |
ttgtgattgctcttcaagttcatcagttaaagcttcagcttctccaaagctgtaattgctaatagggttagcatccatcactccattttcttccctactg |
115 |
Q |
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| T |
34861441 |
ttgtgattgctcttcaagttcatcagttaaagcttcagcttctccaaagctgtaattgctaatagggttagcatccatcactccattttcttccctactg |
34861540 |
T |
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| Q |
116 |
caatccaccttgctctctttgctagcaccctctctaacagaacttctcttgcaaagttcatcaccatcatcatcatcgggcacagacaattcaactttct |
215 |
Q |
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| T |
34861541 |
caatccaccttgctctctttgctagcaccctctctaacagaacttctcttgcaaagttcatcaccattatcatcatcaggcacagacaattcaaccttct |
34861640 |
T |
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| Q |
216 |
cacaccccttacaacgattcagcataacagaaaacaatctctcagcaattccatctctccttgacttaagctcctttggacaatcagaagcagcaacaac |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
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| T |
34861641 |
cacaccccttacaacgattcagcataacagaaaacaatctctcagcaattccatctctcctagacttaaactcctttggacaatcagaagcagcaacaac |
34861740 |
T |
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| Q |
316 |
aattgcatggtcaattatatcgaaaatatccgaattcgatgaacgaaagtaactcctccactgatcaagtgactctgacttcatcttcaatcc |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34861741 |
aattgcatggtcaattatatcgaaaatatccgaattcgatgaacgaaagtaactcctccactgatcaagtgactctgacttcatcttcaatcc |
34861833 |
T |
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