View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15299_low_65 (Length: 226)
Name: NF15299_low_65
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15299_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 9212836 - 9213026
Alignment:
| Q |
19 |
ttattgacattaggaagcaaagccatagcataaactagtttcttccaattttatttttaatatatgcnnnnnnnnaagcctaagaactacactcacccac |
118 |
Q |
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| T |
9212836 |
ttattgacattaggaagcaaagccatagcagaaactagtttcttccaattttatttttaatctgt--ttttttttaagcctaagaactacactcacccac |
9212933 |
T |
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| Q |
119 |
attaagtgtggaggaatagagaatcctaaaatcaaactcatacctcaacatattaacatctatgcaactacatgttaagttgtacgttcatct |
211 |
Q |
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| T |
9212934 |
attaagtgtggaggaatagagaatcctaaaatcaaactcatacctcaacatattaacgtctatgcaactatatgttaagttgtacgttcatct |
9213026 |
T |
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