View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15299_low_66 (Length: 226)

Name: NF15299_low_66
Description: NF15299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15299_low_66
NF15299_low_66
[»] chr3 (32 HSPs)
chr3 (14-138)||(41936191-41936315)
chr3 (16-140)||(26724982-26725115)
chr3 (15-134)||(3972274-3972401)
chr3 (15-134)||(3997477-3997604)
chr3 (16-150)||(32619811-32619954)
chr3 (16-81)||(35963152-35963219)
chr3 (16-150)||(14752189-14752332)
chr3 (16-134)||(50651034-50651161)
chr3 (15-81)||(6752669-6752737)
chr3 (17-134)||(20847265-20847391)
chr3 (73-150)||(47115915-47115992)
chr3 (16-132)||(28875406-28875531)
chr3 (15-134)||(2927288-2927416)
chr3 (15-150)||(26208013-26208157)
chr3 (16-81)||(11054369-11054432)
chr3 (16-134)||(37042414-37042541)
chr3 (16-61)||(6075081-6075126)
chr3 (15-81)||(47866970-47867037)
chr3 (16-61)||(48802559-48802604)
chr3 (20-81)||(579195-579258)
chr3 (16-81)||(6438083-6438150)
chr3 (82-134)||(46557167-46557219)
chr3 (74-140)||(45781457-45781523)
chr3 (15-61)||(46557280-46557326)
chr3 (64-102)||(54725639-54725677)
chr3 (77-150)||(23910494-23910567)
chr3 (16-149)||(36546542-36546684)
chr3 (16-149)||(36561631-36561773)
chr3 (16-134)||(41476333-41476453)
chr3 (16-61)||(47864191-47864236)
chr3 (16-61)||(54464974-54465019)
chr3 (16-81)||(33974616-33974683)
[»] chr2 (32 HSPs)
chr2 (15-134)||(9864756-9864882)
chr2 (15-134)||(25572041-25572168)
chr2 (16-133)||(40584436-40584562)
chr2 (15-139)||(29524073-29524206)
chr2 (19-134)||(8701601-8701725)
chr2 (16-150)||(5963197-5963339)
chr2 (16-150)||(24204550-24204693)
chr2 (16-150)||(7645248-7645394)
chr2 (16-150)||(19264095-19264239)
chr2 (16-150)||(6110220-6110365)
chr2 (16-134)||(33198668-33198795)
chr2 (15-134)||(44454986-44455112)
chr2 (16-82)||(45085253-45085321)
chr2 (16-135)||(30830632-30830760)
chr2 (74-140)||(29514506-29514572)
chr2 (20-150)||(35022897-35023037)
chr2 (16-134)||(45660361-45660488)
chr2 (73-134)||(4707483-4707544)
chr2 (31-101)||(11031000-11031072)
chr2 (16-61)||(28858305-28858350)
chr2 (16-81)||(33677479-33677546)
chr2 (25-98)||(35245811-35245886)
chr2 (16-81)||(35517119-35517186)
chr2 (16-81)||(41528252-41528319)
chr2 (79-134)||(40808757-40808811)
chr2 (16-134)||(3201322-3201449)
chr2 (76-134)||(26998382-26998440)
chr2 (74-140)||(29514050-29514116)
chr2 (78-140)||(43415468-43415530)
chr2 (16-61)||(6766053-6766098)
chr2 (16-81)||(28599245-28599312)
chr2 (74-134)||(43451564-43451624)
[»] chr5 (29 HSPs)
chr5 (16-134)||(42273645-42273770)
chr5 (16-150)||(20644010-20644153)
chr5 (15-134)||(25840859-25840987)
chr5 (15-134)||(39505271-39505398)
chr5 (16-150)||(11261906-11262049)
chr5 (16-81)||(8225459-8225524)
chr5 (17-134)||(19413138-19413264)
chr5 (21-133)||(42104287-42104408)
chr5 (15-130)||(4463355-4463479)
chr5 (15-117)||(17351383-17351494)
chr5 (16-134)||(43590000-43590127)
chr5 (16-61)||(12730100-12730145)
chr5 (16-81)||(6686380-6686447)
chr5 (75-134)||(5369069-5369128)
chr5 (31-134)||(37522627-37522739)
chr5 (14-81)||(7071232-7071301)
chr5 (31-101)||(8506448-8506521)
chr5 (73-143)||(12912323-12912393)
chr5 (74-140)||(16286115-16286181)
chr5 (16-150)||(32110998-32111141)
chr5 (16-58)||(37562885-37562927)
chr5 (16-134)||(38130154-38130281)
chr5 (16-61)||(446009-446054)
chr5 (16-81)||(9957517-9957581)
chr5 (16-61)||(32017700-32017745)
chr5 (16-61)||(34425327-34425372)
chr5 (16-61)||(38280843-38280888)
chr5 (17-61)||(104342-104386)
chr5 (78-150)||(5984130-5984202)
[»] chr4 (32 HSPs)
chr4 (16-140)||(5483303-5483436)
chr4 (16-134)||(35310773-35310900)
chr4 (15-133)||(48793660-48793785)
chr4 (15-150)||(32280018-32280146)
chr4 (16-134)||(4058709-4058836)
chr4 (16-134)||(47867873-47868000)
chr4 (16-133)||(1585379-1585505)
chr4 (15-116)||(25297271-25297381)
chr4 (15-134)||(42915522-42915651)
chr4 (15-134)||(8683337-8683463)
chr4 (25-117)||(17799182-17799283)
chr4 (16-81)||(29203500-29203567)
chr4 (15-126)||(14583722-14583841)
chr4 (15-134)||(32323293-32323420)
chr4 (16-134)||(14332754-14332881)
chr4 (16-134)||(20281585-20281712)
chr4 (16-150)||(31280193-31280326)
chr4 (15-81)||(50080542-50080610)
chr4 (16-81)||(20716174-20716241)
chr4 (22-134)||(24940365-24940486)
chr4 (16-134)||(28669032-28669158)
chr4 (31-134)||(46070553-46070663)
chr4 (74-141)||(50768501-50768568)
chr4 (16-102)||(17794604-17794699)
chr4 (74-140)||(30011952-30012018)
chr4 (16-134)||(39078151-39078277)
chr4 (16-134)||(56318101-56318228)
chr4 (15-82)||(12002730-12002794)
chr4 (63-116)||(32203263-32203316)
chr4 (16-61)||(52535698-52535743)
chr4 (78-134)||(5815534-5815590)
chr4 (78-134)||(29511490-29511546)
[»] chr7 (23 HSPs)
chr7 (15-134)||(22632084-22632212)
chr7 (15-134)||(47779599-47779727)
chr7 (16-150)||(25944572-25944715)
chr7 (17-117)||(27810789-27810898)
chr7 (78-150)||(44682944-44683016)
chr7 (22-116)||(48413723-48413823)
chr7 (16-150)||(18102526-18102669)
chr7 (16-81)||(2610665-2610732)
chr7 (14-142)||(16917466-16917602)
chr7 (16-81)||(19912866-19912933)
chr7 (16-134)||(4910670-4910797)
chr7 (16-130)||(25737668-25737791)
chr7 (16-134)||(35923248-35923375)
chr7 (16-134)||(45485951-45486078)
chr7 (16-81)||(14805866-14805933)
chr7 (16-81)||(15252860-15252927)
chr7 (15-134)||(14574559-14574687)
chr7 (16-134)||(6191041-6191168)
chr7 (16-134)||(20123717-20123844)
chr7 (16-134)||(46760294-46760421)
chr7 (16-57)||(12633110-12633151)
chr7 (15-81)||(15995714-15995782)
chr7 (14-80)||(19492493-19492561)
[»] chr8 (25 HSPs)
chr8 (16-134)||(15824676-15824797)
chr8 (15-113)||(2052829-2052934)
chr8 (16-150)||(34890197-34890340)
chr8 (15-134)||(8709825-8709951)
chr8 (15-134)||(29920307-29920435)
chr8 (16-150)||(36190766-36190909)
chr8 (31-101)||(14576224-14576296)
chr8 (62-149)||(40773427-40773514)
chr8 (15-61)||(4047015-4047061)
chr8 (16-134)||(7858522-7858649)
chr8 (76-134)||(8673444-8673502)
chr8 (16-134)||(43216386-43216513)
chr8 (16-61)||(8107738-8107783)
chr8 (16-61)||(15958034-15958079)
chr8 (16-61)||(28348605-28348650)
chr8 (16-61)||(31734109-31734154)
chr8 (16-81)||(7022502-7022569)
chr8 (16-81)||(24892832-24892899)
chr8 (54-116)||(3225580-3225642)
chr8 (16-61)||(7499720-7499765)
chr8 (16-61)||(13143758-13143803)
chr8 (16-61)||(13144082-13144127)
chr8 (16-61)||(34158412-34158457)
chr8 (32-81)||(3642068-3642119)
chr8 (16-60)||(41086508-41086552)
[»] chr1 (43 HSPs)
chr1 (15-134)||(44148874-44148998)
chr1 (31-116)||(8889753-8889840)
chr1 (15-134)||(3076290-3076418)
chr1 (17-132)||(10558796-10558920)
chr1 (15-134)||(24728665-24728793)
chr1 (16-134)||(37735421-37735548)
chr1 (16-81)||(33369549-33369614)
chr1 (16-81)||(46542980-46543045)
chr1 (18-150)||(2126036-2126177)
chr1 (16-134)||(32983210-32983335)
chr1 (14-134)||(43765288-43765417)
chr1 (16-150)||(43667325-43667466)
chr1 (16-134)||(6785452-6785579)
chr1 (16-150)||(15959662-15959805)
chr1 (16-134)||(28120793-28120920)
chr1 (16-134)||(32624043-32624170)
chr1 (16-81)||(3875119-3875186)
chr1 (16-81)||(23392264-23392330)
chr1 (16-133)||(1034854-1034979)
chr1 (16-134)||(12449005-12449132)
chr1 (77-143)||(30221791-30221857)
chr1 (77-134)||(52984999-52985056)
chr1 (16-81)||(39555684-39555751)
chr1 (16-81)||(45226134-45226201)
chr1 (77-140)||(3861727-3861790)
chr1 (16-134)||(6786834-6786961)
chr1 (31-81)||(13136651-13136701)
chr1 (16-58)||(35691388-35691430)
chr1 (16-134)||(39932610-39932737)
chr1 (16-58)||(40718674-40718716)
chr1 (15-61)||(50665258-50665304)
chr1 (16-61)||(1820411-1820456)
chr1 (16-61)||(2246134-2246179)
chr1 (16-61)||(7468083-7468128)
chr1 (77-134)||(11241093-11241150)
chr1 (19-81)||(16854139-16854203)
chr1 (16-81)||(33431557-33431622)
chr1 (16-61)||(42965934-42965979)
chr1 (15-56)||(47303031-47303072)
chr1 (16-61)||(47600159-47600204)
chr1 (14-75)||(2459970-2460033)
chr1 (16-60)||(28016865-28016909)
chr1 (73-101)||(51338968-51338996)
[»] scaffold0009 (2 HSPs)
scaffold0009 (15-134)||(157789-157917)
scaffold0009 (15-81)||(52700-52768)
[»] chr6 (11 HSPs)
chr6 (15-134)||(7274913-7275041)
chr6 (16-81)||(17751842-17751909)
chr6 (16-140)||(30794224-30794357)
chr6 (16-81)||(12461527-12461594)
chr6 (16-134)||(11082283-11082410)
chr6 (26-131)||(16655199-16655306)
chr6 (14-57)||(7163843-7163886)
chr6 (16-58)||(3095842-3095884)
chr6 (64-102)||(5300670-5300708)
chr6 (16-81)||(34177739-34177806)
chr6 (16-81)||(35129153-35129220)
[»] scaffold0442 (1 HSPs)
scaffold0442 (16-134)||(10041-10168)
[»] scaffold0111 (1 HSPs)
scaffold0111 (16-81)||(40175-40242)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-126)||(233534-233653)
[»] scaffold0774 (1 HSPs)
scaffold0774 (16-134)||(3466-3593)
[»] scaffold0391 (1 HSPs)
scaffold0391 (54-134)||(5181-5261)
[»] scaffold1157 (1 HSPs)
scaffold1157 (73-149)||(1690-1766)
[»] scaffold0300 (1 HSPs)
scaffold0300 (16-81)||(671-738)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-81)||(154857-154924)


Alignment Details
Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 41936315 - 41936191
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaactt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  41936315 acttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaattaaaattgattttacatcttcccatgaaactt 41936216  T
Q  114 attctaaataaaacacaaaaagtta 138  Q
    |||||||||||||||||||||||||    
T  41936215 attctaaataaaacacaaaaagtta 41936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 26725115 - 26724982
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||||||| || ||||||||| |||||| |||| ||||||  | |||||||||||||       ||||||||||||| |||||||||||||||     
T  26725115 ttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcag 26725016  T
Q  107 caaacttattctaaataaaacacaaaaagttata 140  Q
     |||||||||| ||| |||||||||||| |||||    
T  26725015 aaaacttattccaaagaaaacacaaaaaattata 26724982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 3972274 - 3972401
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatt--ttctctctcccattttctccataacc-------aatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||||| ||||||||| | |||||       ||||||||||| |||||||||||| ||    
T  3972274 cttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttccca 3972373  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  3972374 taaaacttattc-aaagaaaacacaaaaa 3972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 3997604 - 3997477
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatt--ttctctctcccattttctccataacc-------aatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||||| ||||||||| | |||||       ||||||||||| |||||||||||| ||    
T  3997604 cttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttccca 3997505  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  3997504 taaaacttattc-aaagaaaacacaaaaa 3997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 32619954 - 32619811
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctc--tcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    ||||||| || ||| |||||||||||| ||||||||||||||||  ||||| |||||||||||       ||||||||||||  ||||||||||||| ||    
T  32619954 ttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttcttat 32619855  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||| ||||| ||| |||||||||||  ||||| || ||||||    
T  32619854 aaaacctattccaaagaaaacacaaaatattatactccaaattc 32619811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35963152 - 35963219
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||   |||||||||||||||||||    
T  35963152 ttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaat 35963219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 14752332 - 14752189
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataac-------caatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| ||||||||       |||||||||||| ||||||||||||  ||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     ||  || ||| ||| |||||||||||| ||||| || ||||||    
T  14752232 aaatttttttccaaagaaaacacaaaaaattatactccaaattc 14752189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 50651161 - 50651034
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataac-------caatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    ||||||||||||||       |||||||||||| ||||||||||||  ||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaa 50651034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 6752669 - 6752737
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataaccaat 81  Q
    |||||| |||||||| |||||||||||| |||||| |||  ||||||| ||||||||||||||||||||    
T  6752669 cttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaat 6752737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 20847391 - 20847265
Alignment:
Q  17 tattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccata-------accaatgaaaattgattttacatcttctcatc 107  Q
    ||||||||| ||| |||||||||||| |||||||||||  ||||||  |||||||||||||       |||||||||||||| ||  ||||||||  ||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||| ||| ||||||||||||    
T  20847291 aaacttattccaaagaaaacacaaaaa 20847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 47115915 - 47115992
Alignment:
Q  73 ataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    |||||||| |||||||| |||||||||||  ||| ||| ||||||||||  ||||||||||| ||||| |||||||||    
T  47115915 ataaccaaagaaaattgcttttacatctttccataaaatttattctaaaacaaacacaaaaaattatactctaaattc 47115992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 28875406 - 28875531
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaa-------tgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| ||||| |||||| ||||||||||||| | ||   ||||||||||||||||||       ||||||||| ||||||||||||| ||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 28875505  T
Q  107 caaacttattctaaataaaacacaaa 132  Q
     |||||| ||| ||| ||||||||||    
T  28875506 aaaactttttccaaagaaaacacaaa 28875531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 2927288 - 2927416
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||||||  | ||||| | |||||       ||||||||||||  |||||||||||| ||    
T  2927288 cttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttccca 2927387  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| |||| |||||||    
T  2927388 taaaacttattccaaagaaaatacaaaaa 2927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 26208013 - 26208157
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||| ||   |||||| |||| ||||||||||||||| ||  |||||||||||| ||       ||||||||||||| |||||||||||  ||    
T  26208013 cttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttacca 26208112  T
Q  106 tcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    | |||||||||| | | ||||||||||||  |||| |||||||||    
T  26208113 tgaaacttattccagacaaaacacaaaaaactatactctaaattc 26208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 11054432 - 11054369
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||| |  |||||| ||||||||||||    
T  11054432 ttattctcataaaattaaatgcaaattacattcaattttctcttt--cattttttccataaccaat 11054369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 37042541 - 37042414
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  37042541 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 37042442  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||  ||||||||||||    
T  37042441 aaaactttttccaacgaaaacacaaaaa 37042414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 6075081 - 6075126
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctc 6075126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 47867037 - 47866970
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||  ||| ||||||||||| ||||    
T  47867037 cttattctcat-aaattaaatgcaaattacattcaattttctctctcttccactttctccataatcaat 47866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 48802604 - 48802559
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  48802604 ttattctcataaaagtaaatgcaaattacattcaattttctctctc 48802559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 579258 - 579195
Alignment:
Q  20 tctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||| ||| |||||||||||| ||||||||||||||||||   |||||| ||||||||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaat 579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 6438083 - 6438150
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||| |||||  |||||||  |||||||||||||||||||    
T  6438083 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaat 6438150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 46557219 - 46557167
Alignment:
Q  82 gaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||||||  |||||||||||| ||| |||||||||||||| ||||||||||||    
T  46557219 gaaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaa 46557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 45781457 - 45781523
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||| ||||  |||||||||||  ||| |||||||||||||| | |||||||||| |||||    
T  45781457 taaccaatgagaattatttttacatctttccatgaaacttattctaaagagaacacaaaaaattata 45781523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 46557326 - 46557280
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||||||||||||| |||||| ||||| |||| |||||||||||||    
T  46557326 cttattctcatgaaattaaatgtaaattacatttaattttctctctc 46557280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 54725677 - 54725639
Alignment:
Q  64 attttctccataaccaatgaaaattgattttacatcttc 102  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  54725677 attttctcaataaccaatgaaaattgtttttacatcttc 54725639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 23910567 - 23910494
Alignment:
Q  77 ccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    ||||||||||||  ||||||||||||  || |||||| ||  ||| ||||||||||||| |||| |||||||||    
T  23910567 ccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaattc 23910494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36546542 - 36546684
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaa-------tgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||| |||| ||||||||   |||||| || ||||||||       ||||||||| ||||||||||||  ||    
T  36546542 ttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctat 36546641  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaatt 149  Q
     |||||| ||| ||| |||| |||||||  |||| ||||||||    
T  36546642 gaaactttttccaaagaaaatacaaaaaactatactctaaatt 36546684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 36561773 - 36561631
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaat-------gaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||| |||| ||||||||   |||||| || |||||||||       |||||||| ||||||||||||  ||    
T  36561773 ttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctat 36561674  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaatt 149  Q
     |||||| ||| ||| |||| |||||||  |||| ||||||||    
T  36561673 gaaactttttccaaagaaaatacaaaaaactatactctaaatt 36561631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 41476453 - 41476333
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaactt 113  Q
    |||||||||| ||| ||||||||||||  |||||||||||  || ||  |||||| ||| || ||||||||||||  |||||||||||   || ||||||    
T  41476453 ttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttccctagccaatgaaaattatttttacatctttctataaaactt 41476354  T
Q  114 attctaaataaaacacaaaaa 134  Q
     ||  ||| ||||||||||||    
T  41476353 ttttcaaagaaaacacaaaaa 41476333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 47864191 - 47864236
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||| ||||||    
T  47864191 ttattctcataaaattaaatgcaaattacattcaattttttctctc 47864236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 54465019 - 54464974
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||| ||||||| ||||||||||||||||||    
T  54465019 ttattctcataaaattaaacgcaaattacattcaattttctctctc 54464974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 33974683 - 33974616
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||| |||||||  |||||  |||||| ||||||||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaat 33974616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9864882 - 9864756
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||       ||||||||||||| |||||| ||||| |||     
T  9864882 cttattctcatgaaattaaatgcaaattacattcaattttatctcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatg 9864783  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||| ||| ||||||||||||    
T  9864782 aaacttattccaaagaaaacacaaaaa 9864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 25572041 - 25572168
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||  ||||||| |||||||       ||||||||||||| |||||||||||| ||    
T  25572041 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttccca 25572139  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  25572140 tgaaacttattccaaagaaaacacaaaaa 25572168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 40584562 - 40584436
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaa-------tgaaaattgattttacatcttctcat 106  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||   ||||||  ||||||||||       ||||||||| |||||||||||| |||    
T  40584562 ttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccat 40584463  T
Q  107 caaacttattctaaataaaacacaaaa 133  Q
     |||||||||||||| |||||||||||    
T  40584462 aaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 29524206 - 29524073
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataaccaat-------gaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||    ||||| ||||||||||||       |||||||| |||||||||||| ||    
T  29524206 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttccca 29524107  T
Q  106 tcaaacttattctaaataaaacacaaaaagttat 139  Q
    | |||||||||| ||| |||||||||||| ||||    
T  29524106 tgaaacttattccaaagaaaacacaaaaaattat 29524073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 8701601 - 8701725
Alignment:
Q  19 ttctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcatcaa 109  Q
    ||||||||||| ||||| |||||| |||| |||||||||||||  ||||||| |||||||       ||||||||||||| |||||||||||| ||| ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  110 acttattctaaataaaacacaaaaa 134  Q
    |||||||| ||| |||||| |||||    
T  8701701 acttattccaaagaaaacataaaaa 8701725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5963197 - 5963339
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    ||||||| |||| | |||||||||||| ||||||||||||||||||  ||||||||| |||||       ||||| ||||||  ||||||||| || |||    
T  5963197 ttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccat 5963295  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||||||||||| |||||||||||| ||| | |||||||||    
T  5963296 aaaacttattctaaagaaaacacaaaaaattagactctaaattc 5963339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 24204693 - 24204550
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat-------gaaaattgattttacatcttctcat 106  Q
    |||||||||||| | |||||| |||||  |||||||||||||||||  ||||||||| ||||||||||       ||||||||||||||||| |||  ||    
T  24204693 ttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||||||| ||| ||||||||| || ||||| || ||||||    
T  24204593 aaaacttattccaaagaaaacacaataaattatactccaaattc 24204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 7645394 - 7645248
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctct-----cccattttctccataa-------ccaatgaaaattgattttacatcttct 103  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |      |||||||||||||||       ||||||||||||| |||||||| |||     
T  7645394 ttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgttcc 7645295  T
Q  104 catcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    ||| ||| |||||||||  |||||||||||  ||||| || ||||||    
T  7645294 catgaaatttattctaaggaaaacacaaaatattatactccaaattc 7645248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 19264095 - 19264239
Alignment:
Q  16 ttattctcatgaaactaaatgcaaa-ttgcattcaattttctctctccc--attttctccataaccaa-------tgaaaattgattttacatcttctca 105  Q
    |||||||||| ||| |||||||||| || ||||||||||||||||||    ||||| |||||||||||       ||||||||| ||||||||||||  |    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  106 tcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    | |||||| ||| ||| |||||||||||| ||||| |||||||||    
T  19264195 taaaactttttccaaagaaaacacaaaaaattatactctaaattc 19264239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 6110365 - 6110220
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc----ccattttctccataa-------ccaatgaaaattgattttacatcttctc 104  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||     |||||| |||||||       ||||||||||||| ||||||||||||      
T  6110365 ttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 6110266  T
Q  105 atcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    || |||||| |||  || ||||||||||||| |||| || ||||||    
T  6110265 ataaaactttttccgaagaaaacacaaaaagctatactccaaattc 6110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 33198795 - 33198668
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctcc-------ataaccaatgaaaattgattttacatcttctcat 106  Q
    ||||||||||  || |||||||||||| ||||||||||||||||||   ||||||||||       ||||||||| ||||||| ||||||||||||  ||    
T  33198795 ttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| || |||| ||||||||||||    
T  33198695 aaaacttcttttaaagaaaacacaaaaa 33198668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 44454986 - 44455112
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataaccaat---gaa--aattgattttacatcttctcatc 107  Q
    ||||||||||||||| |||||||||||| |||||||||||  |||||| |||||||||| |||| ||||    ||  ||||  |||||| | ||| |||     
T  44454986 cttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatgaattttttttacgttttcccatg 44455085  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||| ||||||||||||||||    
T  44455086 aaacttattcaaaataaaacacaaaaa 44455112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 45085253 - 45085321
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaatg 82  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| |||||||||||||    
T  45085253 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatg 45085321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 30830760 - 30830632
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctc--tcccattttc-------tccataaccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||  |  |||||||       || ||||||||||||| ||  ||||| ||||||||||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  107 caaacttattctaaataaaacacaaaaag 135  Q
     |||||||||  ||| |||||||||||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaag 30830632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 29514572 - 29514506
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||||||||  ||||||||||| |||| |||||||||||||  | |||||||||| |||||    
T  29514572 taaccaatgaaaattatttttacatcttttcatgaaacttattctaaggataacacaaaaaattata 29514506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 35022897 - 35023037
Alignment:
Q  20 tctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctcc---------ataaccaatgaaaattgattttacatcttctcatca 108  Q
    |||||| ||| ||||||||||||| |||||||||||||||||  |||||||||||         ||| | ||||||||||| ||||||||||||  || |    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatga 35022996  T
Q  109 aacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    |||||| || ||| |||||||||||| ||||| || ||||||    
T  35022997 aacttactccaaa-aaaacacaaaaaattatactccaaattc 35023037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 45660361 - 45660488
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||| |||||  |||||||  ||||||||||||||       ||||||||||||| ||||||||||||  ||    
T  45660361 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  45660461 aaaacttttttcaaagaaaacacaaaaa 45660488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 4707483 - 4707544
Alignment:
Q  73 ataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    ||||||||||||||||| ||| |||||||| | | |||||||||||||  ||||||||||||    
T  4707483 ataaccaatgaaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaa 4707544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 11031072 - 11031000
Alignment:
Q  31 taaatgcaaattgcattcaattt--tctctctcccattttctccataaccaatgaaaattgattttacatctt 101  Q
    |||||||||| ||||||||||||  |||||||  ||||||||| ||||||||| ||||||| ||||| |||||    
T  11031072 taaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaaaattgtttttatatctt 11031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 28858305 - 28858350
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctc 28858350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 33677479 - 33677546
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaat 81  Q
    |||||||||||||| ||||||| |||  ||||||||||||  ||||| | ||||||||||||||||||    
T  33677479 ttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaat 33677546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35245886 - 35245811
Alignment:
Q  25 tgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaatgaaaattgattttacat 98  Q
    ||||| ||||||||||| | |||| |||| | |||||  ||||||||||||||| |||||||||||| ||||||||    
T  35245886 tgaaattaaatgcaaatagtattcgatttgccctctcttccattttctccataatcaatgaaaattgtttttacat 35245811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35517119 - 35517186
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  35517119 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 35517186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 41528252 - 41528319
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  41528252 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 41528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 40808811 - 40808757
Alignment:
Q  79 aatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    ||||||||||| |||||||||||| ||| |||||||||| ||| ||||||||||||    
T  40808811 aatgaaaattgtttttacatcttc-catgaaacttattccaaagaaaacacaaaaa 40808757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 3201322 - 3201449
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||  ||| |||  |||||| |||||||       ||||||||||||| |||||||||||   ||    
T  3201322 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  3201422 aaaactttttccaaagaaaacacaaaaa 3201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 26998382 - 26998440
Alignment:
Q  76 accaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||||||||||||| ||||||||||||  || ||||||||| |||| | ||||||||||    
T  26998382 accaatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaa 26998440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 29514116 - 29514050
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||||||||  ||||||||||| |||| ||| |||||||||  | |||||||||| |||||    
T  29514116 taaccaatgaaaattatttttacatcttttcatgaaatttattctaaggagaacacaaaaaattata 29514050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 43415468 - 43415530
Alignment:
Q  78 caatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||||| ||||||||||||  || |||||| || |||| |||||||||||| |||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattata 43415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 6766098 - 6766053
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||    
T  6766098 ttattctcattaaattaaatgtaaattacattcaattttctctctc 6766053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 28599312 - 28599245
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||| ||| ||||||||||||||  |||  |||||| ||||||||||||    
T  28599312 ttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaat 28599245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 43451564 - 43451624
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||||||||||||||  |||||||||||  ||| |||||||||||||  | ||||||||||    
T  43451564 taaccaatgaaaattatttttacatctttccatgaaacttattctaaggagaacacaaaaa 43451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 42273645 - 42273770
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcatca 108  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||       ||||||||||||| ||||||||||||| || |    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataa 42273744  T
Q  109 aacttattctaaataaaacacaaaaa 134  Q
    ||||| ||| ||| ||||||||||||    
T  42273745 aactttttccaaagaaaacacaaaaa 42273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 20644010 - 20644153
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||||||| |||||||||||| |||||||||||  ||||||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||| ||| |||||||||||| ||||| || ||||||    
T  20644110 aaaactttttccaaagaaaacacaaaaaattatactccaaattc 20644153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 25840859 - 25840987
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataaccaat-------gaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||    ||||| ||||||| ||||       |||||||| |||||||||||| ||    
T  25840859 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttccca 25840958  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  25840959 tgaaacttattccaaagaaaacacaaaaa 25840987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 39505398 - 39505271
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccat-tttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||   | ||| |||||||       ||||||||||||| |||||||||||  |||    
T  39505398 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||||||| ||| ||||||||||||    
T  39505298 aaaacttattccaaagaaaacacaaaaa 39505271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 11262049 - 11261906
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  11262049 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 11261950  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||  ||| |||||||||||| ||||| || ||||||    
T  11261949 aaaacttttttcaaagaaaacacaaaaaattatactccaaattc 11261906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 8225459 - 8225524
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| | |||||||||||||||  |||||| ||||||||||||    
T  8225459 ttattctcataaaattaaatgcaaattacgttcaattttctctctttcattttttccataaccaat 8225524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 19413138 - 19413264
Alignment:
Q  17 tattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataaccaa-------tgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||    ||||| |||||||||||       ||||||||| |||||||||||| |||     
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||  ||| ||||||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaa 19413264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 42104408 - 42104287
Alignment:
Q  21 ctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcatcaaac 111  Q
    ||||||||| |||||||||| | ||||||||||| || |||  |||||||||||||||       ||||||||||||| |||||||||||| ||| ||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaac 42104309  T
Q  112 ttattctaaataaaacacaaaa 133  Q
    || ||| ||| | |||||||||    
T  42104308 ttgttccaaagagaacacaaaa 42104287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 4463355 - 4463479
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaa-------tgaaaattgattttacatcttctca 105  Q
    ||||| ||||||||| ||| |||||||| |||| |||||||||||||   |||||| |||||||||||       ||||||||| |||||||||||| ||    
T  4463355 cttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttccca 4463454  T
Q  106 tcaaacttattctaaataaaacaca 130  Q
    | || ||||||| ||| ||||||||    
T  4463455 tgaagcttattccaaagaaaacaca 4463479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 17351383 - 17351494
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctc--tcccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||  |  ||||||||||||||       ||||| ||||||| |||||||||||  ||    
T  17351383 cttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttcca 17351482  T
Q  106 tcaaacttattc 117  Q
    | ||||||||||    
T  17351483 taaaacttattc 17351494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 43590127 - 43590000
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| |||||||||| |  ||    
T  43590127 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 43590028  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  43590027 aaaactttttcaaaagaaaacacaaaaa 43590000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 12730145 - 12730100
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  12730145 ttattctcataaaattaaatgcaaattacattcaattttctctctc 12730100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 6686380 - 6686447
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  6686380 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 6686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 5369128 - 5369069
Alignment:
Q  75 aaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    ||||||||||||||| ||||||||||||  || ||||||||| |||| | ||||||||||    
T  5369128 aaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaa 5369069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 37522739 - 37522627
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcc--cattttctccataa-------ccaatgaaaattgattttacatcttctcatcaaacttattctaaa 121  Q
    |||||||||||| ||||||||||||||| ||   |||||| |||||||       ||||||||||||| ||||||||||||  || |||||| ||| |||    
T  37522739 taaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaa 37522640  T
Q  122 taaaacacaaaaa 134  Q
     ||||||||||||    
T  37522639 aaaaacacaaaaa 37522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 7071232 - 7071301
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataaccaat 81  Q
    |||||||||||||||| ||||| |||||| |||||||||||  | |||| ||||||||||| ||| ||||    
T  7071232 acttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaat 7071301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 8506448 - 8506521
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcc--cattttctccataacc-aatgaaaattgattttacatctt 101  Q
    |||||||||| |||||||||||| |||| ||   ||||||||| |||||| ||||||||||| |||||||||||    
T  8506448 taaatgcaaagtgcattcaatttgctctatctttcattttctcaataacccaatgaaaattgtttttacatctt 8506521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 12912393 - 12912323
Alignment:
Q  73 ataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattc 143  Q
    ||||||||||||||||| ||||||||||||  || |||||||||  ||| | ||||||||||  |||||||    
T  12912393 ataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatattc 12912323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 16286181 - 16286115
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||| ||||  ||||||||||| |||| |||||||||| ||| | |||||||||| |||||    
T  16286181 taaccaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattata 16286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 32110998 - 32111141
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataac-------caatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||| |||||||||||||   ||| || ||||||||       |||||||||||| ||||||||||||  ||    
T  32110998 ttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||  ||| |||||||||||  ||||| || ||||||    
T  32111098 gaaacttttttcaaagaaaacacaaaacattatactccaaattc 32111141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 37562927 - 37562885
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctct 58  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  37562927 ttattctcataaaattaaatgcaaattacattcaattttctct 37562885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 38130281 - 38130154
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||| | ||| ||||||||||||||||||   |||||| |||||||       ||||||||||||  |||||||| |||  ||    
T  38130281 ttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||||||| ||||||||||||    
T  38130181 aaaactttttctaaagaaaacacaaaaa 38130154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 446054 - 446009
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||| |||||||| |||||| ||||||||||||||||| ||||||    
T  446054 ttattatcatgaaattaaatgaaaattgcattcaattttttctctc 446009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 9957581 - 9957517
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||| |||||||||  |||||| | ||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaactttctctctttcatttt-ttcataaccaat 9957517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 32017700 - 32017745
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||| ||||||||||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctc 32017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 34425327 - 34425372
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctc 34425372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 38280843 - 38280888
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||    
T  38280843 ttattctcataaaattaaatgcaaattatattcaattttctctctc 38280888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 104386 - 104342
Alignment:
Q  17 tattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||||||| ||| |||||||| ||| ||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctctctc 104342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 5984202 - 5984130
Alignment:
Q  78 caatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    |||||||||||| |||||||| ||   || |||||||||| ||| ||||||||||||  |||| |||||||||    
T  5984202 caatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaaactatactctaaattc 5984130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 5483436 - 5483303
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||  |||||||||||||||       ||||||||||||| ||||||||||||  ||    
T  5483436 ttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T
Q  107 caaacttattctaaataaaacacaaaaagttata 140  Q
     ||||||||| |||| |||||||||||| |||||    
T  5483336 taaacttattttaaagaaaacacaaaaaattata 5483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 35310900 - 35310773
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat-------gaaaattgattttacatcttctcat 106  Q
    |||||||||||||| ||||| |||||| |||| |||||||||||||  ||||||| ||||||||||||       |||||||| |||||||||||  |||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccat 35310801  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||||||||||| ||||||||||||    
T  35310800 gaaacttattctaaagaaaacacaaaaa 35310773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 48793785 - 48793660
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat-------gaaaattgattttacatcttctcatc 107  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||   ||||| | ||||||||||       |||||||| |||||||||||| |||     
T  48793785 cttattctcatgaaattaaatgcaaattacatttaattttctctcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccatg 48793686  T
Q  108 aaacttattctaaataaaacacaaaa 133  Q
    |||||||||| ||| |||||||||||    
T  48793685 aaacttattccaaagaaaacacaaaa 48793660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 32280146 - 32280018
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaactta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||     |||  |  || ||| ||||| ||||||| |||||||| |  ||||||||| ||    
T  32280146 cttattctcatgaaactaaatgcaaattacattcaattttct-----cca--taatcaatagccaattaaaattgtttttacatatcttcatcaaaccta 32280054  T
Q  115 ttctaaataaaacacaaaaagttatattctaaattc 150  Q
    ||||||| |||||||||||| ||||| || ||||||    
T  32280053 ttctaaagaaaacacaaaaaattatactccaaattc 32280018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 4058709 - 4058836
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctcc-------ataaccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| |||       ||||||||||||||||| ||||||||||||  ||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  4058809 aaaacttttttcaaagaaaacacaaaaa 4058836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 47867873 - 47868000
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  47867873 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 47867972  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  47867973 aaaactttttccaaagaaaacacaaaaa 47868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 1585505 - 1585379
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||  |||||||||||||||       ||||| ||||||| ||| |||||||  |||    
T  1585505 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccat 1585406  T
Q  107 caaacttattctaaataaaacacaaaa 133  Q
     |||||||||  ||| |||||||||||    
T  1585405 gaaacttatttcaaagaaaacacaaaa 1585379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 25297381 - 25297271
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||| ||||| ||||||||||||  ||||| | |||||||||||||       ||||||||||||| |||||||||||  ||    
T  25297381 cttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctttcca 25297282  T
Q  106 tcaaacttatt 116  Q
    | |||||||||    
T  25297281 tgaaacttatt 25297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 42915522 - 42915651
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc---ccattttctccataa-------ccaatgaaaattgattttacatcttctc 104  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||      |||| |||||||       ||||||||||||| |||||||||||  |    
T  42915522 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcc 42915621  T
Q  105 atcaaacttattctaaataaaacacaaaaa 134  Q
    || |||||||||| ||| ||||||||||||    
T  42915622 atgaaacttattccaaagaaaacacaaaaa 42915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 8683463 - 8683337
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataac-------caatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||||| ||||| |||||| |||| ||||||||||||   ||||| ||||||||       |||||||||||  |||||||| ||  |||     
T  8683463 cttattctcatgaaattaaatacaaattacatttaattttctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatg 8683364  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||| ||| ||||||||||||    
T  8683363 aaacttattccaaagaaaacacaaaaa 8683337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 17799283 - 17799182
Alignment:
Q  25 tgaaactaaatgcaaattgcattcaatt--ttctctctcccattttctcc-------ataaccaatgaaaattgattttacatcttctcatcaaacttat 115  Q
    ||||||||||||||||||||||| ||||  ||||| ||| ||||||||||       ||||||||||||||||| |||||||||||| ||| ||||| ||    
T  17799283 tgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaat 17799184  T
Q  116 tc 117  Q
    ||    
T  17799183 tc 17799182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 29203500 - 29203567
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| ||||||||||||    
T  29203500 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaat 29203567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 14583722 - 14583841
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttc-------tccataaccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| ||||||||| |  |||||| ||||||||       |||||| |||||||||| || |||||||||||| ||    
T  14583722 cttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttccca 14583820  T
Q  106 tcaaacttattctaaataaaa 126  Q
    | ||||||||| |||| ||||    
T  14583821 tgaaacttattttaaagaaaa 14583841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 32323420 - 32323293
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaa-------tgaaaattgattttacatcttctca 105  Q
    |||||| |||||||| |||||| ||||| | ||||||||||||||||  |||||||||| |||| |||       ||||||||| |||||||||||| ||    
T  32323420 cttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttccca 32323322  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | || |||||| |||| ||||||||||||    
T  32323321 taaatcttattttaaagaaaacacaaaaa 32323293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 14332754 - 14332881
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaatg-------aaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| | |||||||||||       ||||||| ||||||||||||  ||    
T  14332754 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctat 14332853  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  14332854 aaaactttttccaaagaaaacacaaaaa 14332881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 20281585 - 20281712
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaa-------tgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||| | ||   |||||| |||||||||||       ||||||||| ||||||||||||  ||    
T  20281585 ttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20281684  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  20281685 aaaactttttccaaagaaaacacaaaaa 20281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 31280193 - 31280326
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataa------ccaatgaaaattgattttacatcttctcatcaa 109  Q
    ||||||| |||||| ||||| |||| ||||||||||||||||||| ||| |||||||||||      ||||||||||||  ||||||||      || ||    
T  31280193 ttattctaatgaaattaaatacaaactgcattcaattttctctcttcca-tttctccataacaatagccaatgaaaattatttttacat------ataaa 31280285  T
Q  110 acttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    |||||||| ||| ||||||||||||  |||| |||||||||    
T  31280286 acttattccaaagaaaacacaaaaaactatactctaaattc 31280326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 50080610 - 50080542
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataaccaat 81  Q
    ||||||| ||||||| |||||||||||| |||||||||||  |||||| ||||||| ||||||| ||||    
T  50080610 cttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaat 50080542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 20716174 - 20716241
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttct--ctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||||||||||||  ||||  |||||| ||||||||||||    
T  20716174 ttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaat 20716241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24940365 - 24940486
Alignment:
Q  22 tcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaat-------gaaaattgattttacatcttctcatcaaact 112  Q
    |||| ||| |||||| ||||| |||| |||||||||||||   |||||||||||||||||||       |||||||| ||||||||||||| || |||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  113 tattctaaataaaacacaaaaa 134  Q
    | ||| ||| |||| |||||||    
T  24940465 ttttccaaagaaaatacaaaaa 24940486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 28669158 - 28669032
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctcc------ataaccaatgaaaattgattttacatcttctcatc 107  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||||||   |||||| ||       ||||||||||||||||| |||||||| |||  ||     
T  28669158 ttattctcataaaattaaatacaaattacattcaattttctctctctttcattttttcataactaataaccaatgaaaattgtttttacattttcctata 28669059  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||| | ||||||| ||||||||||||    
T  28669058 aaaccttttctaaagaaaacacaaaaa 28669032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 46070663 - 46070553
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcccattttctccat-------aaccaatgaaaattgattttacatcttctcatcaaacttattctaaata 123  Q
    |||||||||| |||||||||||| ||||||  ||||||||| ||       ||||||||||||||| ||||||||||||  || |||||||||  ||| |    
T  46070663 taaatgcaaagtgcattcaatttactctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaga 46070564  T
Q  124 aaacacaaaaa 134  Q
     ||||||||||    
T  46070563 caacacaaaaa 46070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 50768501 - 50768568
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatat 141  Q
    |||||||||||||||  |||||||||||  ||| |||||||||| ||  |||||||||||| ||||||    
T  50768501 taaccaatgaaaattatttttacatctttccatgaaacttattccaaggaaaacacaaaaaattatat 50768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 17794699 - 17794604
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttc 102  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||  ||| ||| |||||||       ||||||||||||| ||||||||||||    
T  17794699 ttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttc 17794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 30012018 - 30011952
Alignment:
Q  74 taaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    |||||||||| ||||| |||||||||||  ||| |||||||||| ||| | |||||||||| |||||    
T  30012018 taaccaatgataattgtttttacatctttccatgaaacttattccaaaaataacacaaaaaattata 30011952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 39078151 - 39078277
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataac-------caatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||| ||| ||||||||||||| ||||   |||||| || |||||       |||||||||||| ||||||||||||| ||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttct-at 39078249  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  39078250 aaaactttttccaaagaaaacacaaaaa 39078277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 56318228 - 56318101
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataacc-------aatgaaaattgattttacatcttctcat 106  Q
    ||||| |||| ||| |||||| ||||| ||||||||||||||||||   |||||| |||||||||       ||||||||||| ||||||||||||  ||    
T  56318228 ttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctat 56318129  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     || ||| ||| ||| ||||||||||||    
T  56318128 aaacctttttccaaagaaaacacaaaaa 56318101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 12002794 - 12002730
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaatg 82  Q
    |||||| |||||||| |||||||||||| |||||||   | ||||| ||| |||||||||||||||||    
T  12002794 cttattttcatgaaattaaatgcaaattacattcaa---tatctcttccagtttctccataaccaatg 12002730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 32203263 - 32203316
Alignment:
Q  63 cattttctccataaccaatgaaaattgattttacatcttctcatcaaacttatt 116  Q
    |||||| | |||||||||||||||||| ||||| |||||| ||| |||||||||    
T  32203263 catttttttcataaccaatgaaaattgtttttatatcttcccataaaacttatt 32203316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 52535743 - 52535698
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctc 52535698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 5815534 - 5815590
Alignment:
Q  78 caatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||| ||||||  |||||||||||||||| |||||||||  ||| ||||||||||||    
T  5815534 caataaaaattatttttacatcttctcataaaacttatttcaaagaaaacacaaaaa 5815590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 29511490 - 29511546
Alignment:
Q  78 caatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||||||||||| ||||||||||||  || ||||||||| |||| | ||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaa 29511546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22632084 - 22632212
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||  ||||||| |||||||       ||||||||||||| |||||||||||| ||    
T  22632084 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttccca 22632183  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||  ||| ||||||||||||    
T  22632184 tgaaacttatttcaaagaaaacacaaaaa 22632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 47779599 - 47779727
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataacca-------atgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||| ||    ||||| ||||||||||       |||||||||| |||||||||||| ||    
T  47779599 cttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttccca 47779698  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||||||| ||||||||||||    
T  47779699 tgaaacttattctaaagaaaacacaaaaa 47779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 25944572 - 25944715
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  25944572 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||| ||| |||||||||||| ||||| || ||||||    
T  25944672 aaaactttttccaaagaaaacacaaaaacttatactccaaattc 25944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27810898 - 27810789
Alignment:
Q  17 tattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttc-------tccataaccaatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||| |||||||||||| ||||||||||||  ||||| ||||||||       || ||||||||| ||||||| |||||||||||||||      
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttctcacg 27810799  T
Q  108 aaacttattc 117  Q
    ||||||||||    
T  27810798 aaacttattc 27810789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 44682944 - 44683016
Alignment:
Q  78 caatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    |||||||||||| |||||||||||| |||||||||||||| ||| |||||||||||  ||||| || ||||||    
T  44682944 caatgaaaattgtttttacatcttcgcatcaaacttattccaaaaaaaacacaaaatattatactccaaattc 44683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 48413723 - 48413823
Alignment:
Q  22 tcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataac-------caatgaaaattgattttacatcttctcatcaaactta 114  Q
    |||||||| ||||||||||||  |||||||||||||||| | ||||||||||||||       |||||||||||| |||| ||||||||||| |||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctctcttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaactta 48413821  T
Q  115 tt 116  Q
    ||    
T  48413822 tt 48413823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 18102526 - 18102669
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||||||||||  ||||||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  18102526 ttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 18102625  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||  ||| |||||||||||| ||||| || ||||||    
T  18102626 aaaacttttttcaaagaaaacacaaaaaattatactccaaattc 18102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 2610732 - 2610665
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataaccaat 81  Q
    |||||||||||||| ||| |||||||| |||||||||||   ||||| ||||||||||||||||||||    
T  2610732 ttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaat 2610665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 16917466 - 16917602
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattttctctct--cccattttctccataaccaat-------gaaaattgattttacatcttctc 104  Q
    ||||||| |||| ||| |||||||||||| | ||||||||||||| |  ||||||||| | |||||||||       |||||||| |||||||||||| |    
T  16917466 acttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttccc 16917564  T
Q  105 atcaaacttattctaaataaaacacaaaaagttatatt 142  Q
    || |||||||||| ||| |||| |||||| ||||||||    
T  16917565 atgaaacttattccaaagaaaaaacaaaatgttatatt 16917602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 19912933 - 19912866
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||||||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  19912933 ttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 19912866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 4910797 - 4910670
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||| ||||| ||| |||||||||||| ||||||||||| ||||||   |||||| |||||||       ||||||||||||  ||||||||||||  ||    
T  4910797 ttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||||||| ||||||||||||    
T  4910697 aaaactttttctaaagaaaacacaaaaa 4910670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 25737791 - 25737668
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  25737791 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 25737692  T
Q  107 caaacttattctaaataaaacaca 130  Q
     |||||| ||| ||| ||||||||    
T  25737691 aaaactttttccaaagaaaacaca 25737668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 35923248 - 35923375
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| |||||||||||   ||    
T  35923248 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 35923347  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  35923348 aaaactttttccaaagaaaacacaaaaa 35923375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 45485951 - 45486078
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||  ||||||||||||  ||    
T  45485951 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 45486050  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  45486051 aaaactttttccaaagaaaacacaaaaa 45486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 14805866 - 14805933
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  14805866 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 14805933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 15252860 - 15252927
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  15252860 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 15252927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 14574559 - 14574687
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataac-------caatgaaaattgattttacatcttctca 105  Q
    ||||||||||| ||| ||||||||||||  | ||||||||  |||||| ||||||||| ||||||       ||||| |||||  |||||||||||| ||    
T  14574559 cttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttccca 14574658  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | ||||||||| | || ||||||||||||    
T  14574659 tgaaacttattatcaagaaaacacaaaaa 14574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 6191041 - 6191168
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||| ||||| |||| |||||| ||||||   ||||||||||||||       ||||||||||||| ||||||||||||  ||    
T  6191041 ttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  6191141 aaaacttttttaaaagaaaacacaaaaa 6191168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 20123844 - 20123717
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||  |||||  |||||| |||||||       ||||||||||||| |||||||||||   ||    
T  20123844 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| || |||||||||    
T  20123744 aaaactttttccaaagaatacacaaaaa 20123717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 46760421 - 46760294
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||||||| |||||  |||  |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  46760421 ttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 46760322  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  46760321 aaaacttttttcaaagaaaacacaaaaa 46760294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12633151 - 12633110
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc 57  Q
    |||||||||| ||| |||||||||||| ||||||||||||||    
T  12633151 ttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 15995714 - 15995782
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataaccaat 81  Q
    ||||||||||| ||| ||||||||||||  | ||||||||  |||||| ||||||||| ||||||||||    
T  15995714 cttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaat 15995782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 19492561 - 19492493
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaa 80  Q
    |||||||| ||||||| ||||| ||||||  |||||||||||  ||||| | |||||||||||||||||    
T  19492561 acttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaa 19492493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 15824797 - 15824676
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat-gaaaattgattttacatcttctcatcaaact 112  Q
    |||||||||||||| |||||| ||||| |||| |||||||||||||  ||||||| | |||||||||| |  ||||| |||||||||||  ||| |||||    
T  15824797 ttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaattgtttttacatctttccatgaaact 15824698  T
Q  113 tattctaaataaaacacaaaaa 134  Q
    ||||||||| ||||||||||||    
T  15824697 tattctaaagaaaacacaaaaa 15824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 2052829 - 2052934
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctcc-------ataaccaatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||       ||| ||||||||||||| |||||||||||| |||     
T  2052829 cttattctcatgaaattaaatgcaaattacattcaattttctctcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccata 2052928  T
Q  108 aaactt 113  Q
    ||||||    
T  2052929 aaactt 2052934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 34890340 - 34890197
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||| ||| |||||||||||| ||||| || ||||||    
T  34890240 aaaactttttccaaagaaaacacaaaaaattatactccaaattc 34890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 8709951 - 8709825
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataac-------caatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| | ||||||||||||||       ||||||||| || |||||| ||||| |||     
T  8709951 cttattctcataaaattaaatgcaaattacattcaattttctctcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccatg 8709852  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    | |||||||  ||| ||||||||||||    
T  8709851 agacttatttcaaagaaaacacaaaaa 8709825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 29920435 - 29920307
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| ||||| | |||| |||||||||||| |||||  | ||||| |||||||       ||||||||||||| |||||||||||| ||    
T  29920435 cttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttccca 29920336  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| | ||||||||||    
T  29920335 tgaaacttattccaaagataacacaaaaa 29920307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 36190766 - 36190909
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||  ||| ||||||||||||  |||| |||||||||    
T  36190866 aaaacttttttcaaagaaaacacaaaaaactatactctaaattc 36190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 14576296 - 14576224
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcc--cattttctccataaccaatgaaaattgattttacatctt 101  Q
    |||||||||| |||||||||||| |||||||   ||||||||| ||||||||||||||||  |||||||||||    
T  14576296 taaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaatgaaaattatttttacatctt 14576224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 40773514 - 40773427
Alignment:
Q  62 ccattttctccataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaatt 149  Q
    |||||||||||||||||||| ||||||  |||||||||||||  | ||||||||||| |  |||||||| ||| ||||| || |||||    
T  40773514 ccattttctccataaccaataaaaattatttttacatcttctgttaaaacttattcttagaaaaacacacaaaattatactccaaatt 40773427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 4047061 - 4047015
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||    
T  4047061 cttattctcatgaaattaaatgcaaattacatttaattttctctctc 4047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 7858522 - 7858649
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| | ||||||||||||||||   |||||| |||||||        |||||||||||| ||||||||||||  ||    
T  7858522 ttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctat 7858621  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||||||||||||||||    
T  7858622 aaaacttttttcaaataaaacacaaaaa 7858649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 8673444 - 8673502
Alignment:
Q  76 accaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||||||||||||| ||||||||||||| || |||||||||  ||||| ||||||||||    
T  8673444 accaatgaaaattgtttttacatcttcttataaaacttatttcaaatataacacaaaaa 8673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 43216513 - 43216386
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataacc-------aatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| |||| |||||  |||||||  ||||||||||||||||       ||||||||||| ||||||||||||  ||    
T  43216513 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  43216413 aaaacttttttcaaagaaaacacaaaaa 43216386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 8107783 - 8107738
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  8107783 ttattctcataaaattaaatgcaaattacattcaattttctctctc 8107738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 15958079 - 15958034
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  15958079 ttattctcataaaattaaatgcaaattacattcaattttctctctc 15958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 28348605 - 28348650
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  28348605 ttattctcataaaattaaatgcaaattacattcaattttctctctc 28348650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 31734109 - 31734154
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    
T  31734109 ttattctcatcaaattaaatgcaaattacattcaattttctctctc 31734154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 7022569 - 7022502
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  7022569 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 7022502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 24892832 - 24892899
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||  |||||  |||||| ||||||||||||    
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaat 24892899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 3225642 - 3225580
Alignment:
Q  54 tctctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaacttatt 116  Q
    |||||||| ||||||||||||||  |||| |||||  |||||||| ||||||| |||||||||    
T  3225642 tctctctctcattttctccataatgaatgcaaattatttttacatattctcatgaaacttatt 3225580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 7499720 - 7499765
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||    
T  7499720 ttattctcataaaattaaatgtaaattacattcaattttctctctc 7499765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 13143758 - 13143803
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||| ||||||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctc 13143803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 13144127 - 13144082
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||| |||| ||| |||||||||||| ||||||||||||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctctctc 13144082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 34158457 - 34158412
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||| |||| ||| |||||||||||| ||||||||||||||||||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctc 34158412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 3642119 - 3642068
Alignment:
Q  32 aaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    ||||||||||| ||||||||||||||||||   |||||| ||||||||||||    
T  3642119 aaatgcaaattacattcaattttctctctctttcattttttccataaccaat 3642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 41086552 - 41086508
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctct 60  Q
    |||||||||| ||| |||||||||||| |||| ||||||||||||    
T  41086552 ttattctcataaaattaaatgcaaattacattgaattttctctct 41086508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 44148998 - 44148874
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat-------gaaaattgattttacatcttctcatc 107  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||   ||||| ||||||||||||       |||||||| |||||||||||| |||     
T  44148998 cttattctcatgaaattaaatgcaaattacgtttaattttctctctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccatg 44148901  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||||||| ||| ||||||||||||    
T  44148900 aaacttattccaaagaaaacacaaaaa 44148874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 8889840 - 8889753
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcc--cattttctccataaccaatgaaaattgattttacatcttctcatcaaacttatt 116  Q
    |||||| ||| ||||||||||||||||||||   ||||||||| ||||||||||||||||| ||||||||||||  || |||||||||    
T  8889840 taaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaatgaaaattgtttttacatcttcctataaaacttatt 8889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 3076290 - 3076418
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataaccaa-------tgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||| |    ||||| |||||||||||       ||||||||  |||||||||||| ||    
T  3076290 cttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttccca 3076389  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||||||||||||||||    
T  3076390 taaaacttattccaaataaaacacaaaaa 3076418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 10558920 - 10558796
Alignment:
Q  17 tattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcatc 107  Q
    ||||||||||||| |||||| ||||| |||| |||||| ||||||  |||||||||||||||       ||||||||||||| |||||||||||| |||     
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  108 aaacttattctaaataaaacacaaa 132  Q
    ||| |||||| ||| ||||||||||    
T  10558820 aaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 24728793 - 24728665
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctccc--attttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||| ||||| |||||||||||| |||| |||||||||||||    ||||| |||||||       ||||||||||||| |||||||||||| ||    
T  24728793 cttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttccca 24728694  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  24728693 tgaaacttattcgaaagaaaacacaaaaa 24728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 37735548 - 37735421
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctc--tcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||  | |||||||||||||||       ||||| ||||||| |||||| ||||| |||    
T  37735548 ttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccat 37735449  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||||||| ||| |||| |||||||    
T  37735448 gaaacttattccaaagaaaatacaaaaa 37735421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 33369549 - 33369614
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||  |||||| ||||||||||||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaattttctctctttcattttttccataaccaat 33369614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 46542980 - 46543045
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||  ||||||||||| |||||||    
T  46542980 ttattctcataaaattaaatgcaaattgcatttaattttctctctttcattttctccacaaccaat 46543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 2126036 - 2126177
Alignment:
Q  18 attctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaa-------tgaaaattgattttacatcttctcatca 108  Q
    |||||||| ||| |||||||||||| ||||||||||||||| ||   |||||| |||||||||||       ||||||||| ||||||||||||  || |    
T  2126036 attctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 2126135  T
Q  109 aacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    ||||| ||| ||| ||||||||||||  ||||||| ||||||    
T  2126136 aactttttccaaagaaaacacaaaaaactatattccaaattc 2126177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32983335 - 32983210
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa------ccaatgaaaattgattttacatcttctcatc 107  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||   |||||| |||||||      ||||||||||||| ||||||||||||| ||     
T  32983335 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaatgccaatgaaaattgtttttacatcttcttata 32983236  T
Q  108 aaacttattctaaataaaacacaaaaa 134  Q
    |||||| ||| ||| ||||||||||||    
T  32983235 aaactt-ttccaaagaaaacacaaaaa 32983210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 43765288 - 43765417
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctc 104  Q
    ||||||||||| |||| || |||||||||  |||||||||||| ||||  ||||||||| |||||       |||||||||| || ||||||||||||      
T  43765288 acttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcct 43765387  T
Q  105 atcaaacttattctaaataaaacacaaaaa 134  Q
    || |||||||||||||| ||||||||||||    
T  43765388 ataaaacttattctaaagaaaacacaaaaa 43765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 43667466 - 43667325
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataacc-------aatgaaaattgattttacatcttctcatca 108  Q
    |||||||||| ||| |||||| ||||| |||||||||||||||||  |||||| |||||||||       ||||||||||| |||||| |||||  || |    
T  43667466 ttattctcataaaattaaatgtaaattacattcaattttctctctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataa 43667367  T
Q  109 aacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
    ||||| ||  ||| |||||||||||| ||||| | |||||||    
T  43667366 aacttttttcaaagaaaacacaaaaaattatactttaaattc 43667325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 6785452 - 6785579
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||| | ||||||||||||||||||   |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatat 6785551  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  6785552 aaaactttttcaaaagaaaacacaaaaa 6785579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 15959805 - 15959662
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T
Q  107 caaacttattctaaataaaacacaaaaagttatattctaaattc 150  Q
     |||||| ||  ||| |||||||||||| ||||| || ||||||    
T  15959705 aaaacttttttcaaagaaaacacaaaaaattatactccaaattc 15959662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 28120920 - 28120793
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||| ||| ||| |||||||||||| ||||||||||||||||||   |||||| |||||||       ||||||||||||| |||||||||||| |||    
T  28120920 ttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccat 28120821  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     ||| | ||| |||| ||||||||||||    
T  28120820 aaaattcattttaaaaaaaacacaaaaa 28120793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32624170 - 32624043
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  32624170 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 32624071  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  32624070 aaaacttttttcaaagaaaacacaaaaa 32624043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 3875186 - 3875119
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||   |||||| ||||||||||||    
T  3875186 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaat 3875119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 23392330 - 23392264
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||||||| |||||||||||| |||| |||||||||  ||| ||||||||||||||||||||    
T  23392330 ttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaat 23392264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 1034854 - 1034979
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttct-ctctcccattttctccataaccaat-------gaaaattgattttacatcttctcatc 107  Q
    |||||||||||||| ||||||| |||| ||||||||||| | |||  | ||||||||  ||||||||       |||||||| ||||| ||||||||||     
T  1034854 ttattctcatgaaattaaatgcgaattacattcaatttttttctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatcttctcata 1034953  T
Q  108 aaacttattctaaataaaacacaaaa 133  Q
    |||||||||| ||| |||||||||||    
T  1034954 aaacttattccaaagaaaacacaaaa 1034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 12449132 - 12449005
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||    ||||| |||||||       ||||||||||||| ||||||||||||  ||    
T  12449132 ttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 12449033  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||  ||| ||||||||||||    
T  12449032 aaaacttttttcaaagaaaacacaaaaa 12449005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 30221791 - 30221857
Alignment:
Q  77 ccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattc 143  Q
    ||||| |||| || |||||||||||| ||| ||||||||| |||| |||||||||||| ||||||||    
T  30221791 ccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattc 30221857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 52984999 - 52985056
Alignment:
Q  77 ccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    ||||||||||||| |||||||||||| | | |||||||||| ||| ||||||||||||    
T  52984999 ccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaa 52985056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 39555751 - 39555684
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||||||| |||||||||   |||||| ||||||||||||    
T  39555751 ttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaat 39555684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 45226134 - 45226201
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||  |||||  |||||| ||||||||||||    
T  45226134 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaat 45226201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 3861790 - 3861727
Alignment:
Q  77 ccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttata 140  Q
    ||||||||||||| |||||||||||   || |||||||||||||| |||||| ||||| |||||    
T  3861790 ccaatgaaaattgtttttacatctttcaataaaacttattctaaagaaaacataaaaaattata 3861727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 6786834 - 6786961
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||| | |||||||||||  ||||||  |||||| |||||||       |||||||||||||  |||||||||||  ||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatat 6786933  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  6786934 aaaactttttccaaagaaaacacaaaaa 6786961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 13136701 - 13136651
Alignment:
Q  31 taaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    ||||||||||||  ||||||||||||||||  |||||| ||||||||||||    
T  13136701 taaatgcaaattatattcaattttctctctttcattttttccataaccaat 13136651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 35691388 - 35691430
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctct 58  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  35691388 ttattctcataaaattaaatgcaaattacattcaattttctct 35691430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 39932737 - 39932610
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctcc-------ataaccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||||||    |||||||||       ||| ||||| ||||||| ||||| ||||||| ||    
T  39932737 ttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttat 39932638  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||||||  ||| ||||||||||||    
T  39932637 aaaacttattaaaaaaaaaacacaaaaa 39932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 40718674 - 40718716
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctct 58  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  40718674 ttattctcataaaattaaatgcaaattacattcaattttctct 40718716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 50665258 - 50665304
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||||||    
T  50665258 cttattctcatgaaattaattgcaaattacatttaattttctctctc 50665304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 1820411 - 1820456
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||| ||||||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctc 1820456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 2246179 - 2246134
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| |||| |||||||||||||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctc 2246134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 7468128 - 7468083
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctc 7468083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 11241093 - 11241150
Alignment:
Q  77 ccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    ||||||||||||| ||||||||||||  || |||||| ||| ||| ||||||||||||    
T  11241093 ccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaa 11241150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 16854139 - 16854203
Alignment:
Q  19 ttctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataaccaat 81  Q
    ||||||| ||| |||||||||||| |||| |||||  |||||||  |||||||||||||||||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaat 16854203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 33431557 - 33431622
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctcccattttctccataaccaat 81  Q
    |||||||||| |||  |||| |||||| |||| ||||||||||||  ||||||||| |||||||||    
T  33431557 ttattctcataaaatgaaatacaaattacatttaattttctctctttcattttctctataaccaat 33431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 42965979 - 42965934
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    ||||||| || ||| |||||||||||| ||||||||||||||||||    
T  42965979 ttattcttataaaattaaatgcaaattacattcaattttctctctc 42965934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 47303072 - 47303031
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttct 56  Q
    ||||||||||||||| |||||||||||| |||||| ||||||    
T  47303072 cttattctcatgaaattaaatgcaaattacattcagttttct 47303031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 47600204 - 47600159
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc 61  Q
    |||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctc 47600159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 2460033 - 2459970
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccata 75  Q
    |||| ||||| ||||| |||||||||||||| ||||||||  |||| |||||||||||| ||||    
T  2460033 actttttctcgtgaaattaaatgcaaattgctttcaatttgctctccctcccattttcttcata 2459970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 28016909 - 28016865
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctct 60  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctctct 28016865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 51338996 - 51338968
Alignment:
Q  73 ataaccaatgaaaattgattttacatctt 101  Q
    |||||||||||||||||||||||||||||    
T  51338996 ataaccaatgaaaattgattttacatctt 51338968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 157789 - 157917
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||    ||||| |||||||       ||||||||||||| |||||||||| | ||    
T  157789 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctcccca 157888  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| ||||||||||||    
T  157889 tgaaacttattccaaagaaaacacaaaaa 157917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 52768 - 52700
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||| |||||||| ||||||| |||| |||| |||||||||||||  | ||||||||||||| ||||    
T  52768 cttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaat 52700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7275041 - 7274913
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaattttctctctcc--cattttctccataaccaat-------gaaaattgattttacatcttctca 105  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||||||   |||||| ||||||||||||       |||||||| |||||||||||| ||    
T  7275041 cttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccca 7274942  T
Q  106 tcaaacttattctaaataaaacacaaaaa 134  Q
    | |||||||||| ||| |||| |||||||    
T  7274941 tgaaacttattccaaagaaaatacaaaaa 7274913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 17751909 - 17751842
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaa--ttttctctctcccattttctccataaccaat 81  Q
    ||||||| ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||| ||||    
T  17751909 ttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaat 17751842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 30794357 - 30794224
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctcc-------ataaccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||  | |||||||||       ||| |||||||||| || ||||||||||||  ||    
T  30794357 ttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T
Q  107 caaacttattctaaataaaacacaaaaagttata 140  Q
     |||||||||| |||||||||| ||||| |||||    
T  30794257 aaaacttattccaaataaaacataaaaaattata 30794224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 12461594 - 12461527
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttc--tctctcccattttctccataaccaat 81  Q
    |||||||||||||| ||||| |||||| ||||||||||||  ||||| | ||||||||||||||||||    
T  12461594 ttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaat 12461527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 11082410 - 11082283
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| |||||||       ||||||||||||| |||||||||| |  ||    
T  11082410 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 11082311  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  11082310 aaaactttttccaaagaaaacacaaaaa 11082283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 16655199 - 16655306
Alignment:
Q  26 gaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaacttattctaaata 123  Q
    |||| ||||||||||||||||||| |||  |||| ||  ||||||||  ||||| |||||||||||||||||  ||||   || |||||||||||||| |    
T  16655199 gaaattaaatgcaaattgcattcattttgctctccctttcattttctgtataactaatgaaaattgattttaactctttctatgaaacttattctaaaga 16655298  T
Q  124 aaacacaa 131  Q
     |||||||    
T  16655299 taacacaa 16655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 7163886 - 7163843
Alignment:
Q  14 acttattctcatgaaactaaatgcaaattgcattcaattttctc 57  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||    
T  7163886 acttcttctcatgaaattaaatgcaaattgcatttaattttctc 7163843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 3095884 - 3095842
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctct 58  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  3095884 ttattctcataaaattaaatgcaaattacattcaattttctct 3095842  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 5300708 - 5300670
Alignment:
Q  64 attttctccataaccaatgaaaattgattttacatcttc 102  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  5300708 attttctcaataaccaatgaaaattgtttttacatcttc 5300670  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 34177806 - 34177739
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||| ||||  |||  |||||| ||||||||||||    
T  34177806 ttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaat 34177739  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 35129220 - 35129153
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||| | ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  35129220 ttattctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 35129153  T

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Target: scaffold0442 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 10041 - 10168
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataac-------caatgaaaattgattttacatcttctcat 106  Q
    ||||||||||  || |||||||||||| ||||||||||||||||||   |||||| ||||||||       |||||||||||| ||||||||||||  ||    
T  10041 ttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 10140  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||||||| ||||||||||||    
T  10141 aaaactttttctaaagaaaacacaaaaa 10168  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 40175 - 40242
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 81  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||  ||||||| || |||||||||    
T  40175 ttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaat 40242  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 233653 - 233534
Alignment:
Q  15 cttattctcatgaaactaaatgcaaattgcattcaatttt--ctctctcccattttc-------tccataaccaatgaaaattgattttacatcttctca 105  Q
    ||||||||||||||| |||||||||||| ||||||||| |  |||||| ||||||||       |||||| |||||||||| || |||||||||||| ||    
T  233653 cttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttccca 233555  T
Q  106 tcaaacttattctaaataaaa 126  Q
    | ||||||||| |||| ||||    
T  233554 tgaaacttattttaaagaaaa 233534  T

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Target: scaffold0774 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 3593 - 3466
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataa-------ccaatgaaaattgattttacatcttctcat 106  Q
    ||||||||||  || |||||||||||| ||||||||||||||||||   |||||| |||||||       ||||||||||||  ||||||||||||  ||    
T  3593 ttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 3494  T
Q  107 caaacttattctaaataaaacacaaaaa 134  Q
     |||||| ||| ||| ||||||||||||    
T  3493 aaaactttttcaaaagaaaacacaaaaa 3466  T

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Target: scaffold0391 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 5261 - 5181
Alignment:
Q  54 tctctctcccattttctccataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaa 134  Q
    |||| |||| || ||||| ||||||||| ||||||  ||||| ||||| |||| |||||||||||||| |||| |||||||    
T  5261 tctccctccaatcttctctataaccaataaaaattatttttatatcttttcataaaacttattctaaagaaaaaacaaaaa 5181  T

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Target: scaffold1157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 1766 - 1690
Alignment:
Q  73 ataaccaatgaaaattgattttacatcttctcatcaaacttattctaaataaaacacaaaaagttatattctaaatt 149  Q
    |||||||||||||| || |||||||||||| ||| ||||| |||| ||  ||||||||| || ||||| || |||||    
T  1766 ataaccaatgaaaaatgtttttacatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaatt 1690  T

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Target: scaffold0300 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 738 - 671
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattt--tctctctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| ||||||||||  ||| |||  |||||| ||||||||||||    
T  738 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaat 671  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 154857 - 154924
Alignment:
Q  16 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 81  Q
    |||||||||| ||| |||||||||||| |||| |||||||||  |||  |||||| ||||||||||||    
T  154857 ttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaat 154924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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