View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1529_high_36 (Length: 265)
Name: NF1529_high_36
Description: NF1529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1529_high_36 |
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Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 6320026 - 6320217
Alignment:
| Q |
25 |
catgtccaagaatatggtgagggaaactggaattcagtccggaaatgtaccggacttgctcgctgtgggaaaagctgtcgtctacgatgggcaaatcatt |
124 |
Q |
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| T |
6320026 |
catgttcaaaaatatggtgagggaaactggaattcagtccggaaatgtaccggacttgctcgctgtgggaaaagctgtcgtctacgatgggcaaatcatt |
6320125 |
T |
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| Q |
125 |
tgagacctgatctcagaaagggtgcaattactgctgaagaagaacgccgaatcattgagttgcatcataagatgggaaataaatgggctcaa |
216 |
Q |
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| T |
6320126 |
tgagacctgatctcagaaagggtgcaattactgctgaagaagaacgccgaatcattgagttgcatcataagatgggaaataaatgggctcaa |
6320217 |
T |
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