View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1529_high_44 (Length: 250)
Name: NF1529_high_44
Description: NF1529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1529_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6319977 - 6319736
Alignment:
| Q |
1 |
accaccttctcctccttctcctccagtggtatctccttcatcagtttcttgatcagctgatagtattgactgccttttgcgatcatcatcgccgcttgaa |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
6319977 |
accaccttctcctccttctcctccagtggtatctccttcatcagtttcttgatcagctgacagtattgactgccttttgcgatcatcatcgccgcttgaa |
6319878 |
T |
|
| Q |
101 |
gggctactcataccactcaatatgcctgttttgtgatcgccatcatcttcgcttaaagcgctattcatgactctcaatatgtgagttttgtgatcaccat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6319877 |
gggctactcataccactcaatatgcctgttttgtgatcgccatcatcttcgcttaaagcgctattcatgactctcaatatgtgagttttgtgatcaccat |
6319778 |
T |
|
| Q |
201 |
agtgttcgcttgaagtgctactcatgaatctcaatattcttg |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |
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| T |
6319777 |
agtgttcgcttgaagtgctactcatgaatctcaatatgcttg |
6319736 |
T |
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