View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1529_low_58 (Length: 223)
Name: NF1529_low_58
Description: NF1529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1529_low_58 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 36677608 - 36677477
Alignment:
| Q |
18 |
attgaccctttatgctatattaagtttgcatcatttgcctttagtttatattaaattacgcatgcttgtcctttagttcgagctttttctcgaattattg |
117 |
Q |
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| T |
36677608 |
attgaccctttatgctatattaagtttgcaccatttgcctttagtttatattaaattacgcatgcttgtcctttagttcgagctttttctcgaattattg |
36677509 |
T |
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| Q |
118 |
tcataaaatattaaaatctaatccaaactgtg |
149 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
36677508 |
tcataaaatattaaaatctaatccaaactgtg |
36677477 |
T |
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