View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15301_high_1 (Length: 394)
Name: NF15301_high_1
Description: NF15301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15301_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 30627267 - 30626902
Alignment:
| Q |
14 |
aggggagaaattgtcaatatttt-acatgaacaatactagtatttggattgggttaaggaggatnnnnnnnttacaattacaataccaaggtcatttatt |
112 |
Q |
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| T |
30627267 |
aggggagaaattgtcaatatttttacatgaacactactagtatttggattgggttaaggaggataaaaaaattacaattacaataccaaggtcatttatt |
30627168 |
T |
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| Q |
113 |
aattaaaacatgtttttgttacggtggtggtggcaccggcaacagccttttaatgtaaataattaattttttactataaaagcggttaaggtcatgtgtg |
212 |
Q |
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| T |
30627167 |
aattaaaacatgtttttgttacggtggtggtggcaccggcaacagccttttaatgtaaataattaattttttactataaaagcggttaaggtcatgtgtg |
30627068 |
T |
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| Q |
213 |
tattttaccttagtctttgattcctttatttatggtcaaagttacagtattgaattacacccttcgagataaatctttatcaatcctcaccacaactctc |
312 |
Q |
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| T |
30627067 |
tattttaccttagtctttgattcctttatttatggtcaaagttacagtattgaattacacccttcgagataaatctttatcaatcctcaccccaactctc |
30626968 |
T |
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| Q |
313 |
tactaaacaattcactcccttcctagttcctacctcatgtgtccctctatgttttgaccttgttag |
378 |
Q |
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| T |
30626967 |
tactaaacaattcactcccttcctagttcctacctcatgtttccctctatgttttgaccttgttag |
30626902 |
T |
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