View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15301_high_4 (Length: 295)
Name: NF15301_high_4
Description: NF15301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15301_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 288
Target Start/End: Complemental strand, 36695353 - 36695082
Alignment:
| Q |
18 |
gtatatttcataatttcaccagtaagaactatcaaaaacaatactaaccaatgcatgtttttt-aatcatttcagctgcaggggctacatatattcgatt |
116 |
Q |
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| T |
36695353 |
gtatatttcataatttcaccagtaagaactatcaaaaacaatactaaccaacgcatttttttttaatcatttcagctgcaggggctacatatattcgatt |
36695254 |
T |
|
| Q |
117 |
tatacctctaatgaaggcaagatatgattatggtttgctagtgtttatcttgacattttgtttggtatctgtatcaagttatagagaccatgagataatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36695253 |
tatacctctaatgaaggcaagatatgattatggtttgctagtgtttatcttgacattttgtttggtatctgtatcaagttatagagaccatgagataatt |
36695154 |
T |
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| Q |
217 |
gatactgcacaagatagggtaacaacaattctagttggtggattaatttctgtgttggttaacatattcttg |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
36695153 |
gatactgcacaagatagggtaacaacaattctagttggtggattaatttctgtgttggttaacattttcttg |
36695082 |
T |
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