View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15302_high_5 (Length: 675)

Name: NF15302_high_5
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15302_high_5
NF15302_high_5
[»] chr6 (15 HSPs)
chr6 (240-451)||(17951955-17952166)
chr6 (240-444)||(35175783-35175987)
chr6 (499-675)||(17951731-17951907)
chr6 (499-675)||(34344065-34344241)
chr6 (501-675)||(35175553-35175726)
chr6 (244-409)||(34343847-34344004)
chr6 (240-364)||(34345291-34345415)
chr6 (240-345)||(17950561-17950666)
chr6 (282-331)||(24662522-24662571)
chr6 (241-364)||(4289419-4289542)
chr6 (282-377)||(13613569-13613664)
chr6 (238-329)||(4641353-4641444)
chr6 (255-345)||(3018451-3018541)
chr6 (381-442)||(10568561-10568622)
chr6 (237-345)||(29077325-29077433)
[»] chr4 (41 HSPs)
chr4 (240-451)||(5484540-5484751)
chr4 (239-451)||(43779780-43779992)
chr4 (240-451)||(39921494-39921705)
chr4 (243-451)||(32652102-32652310)
chr4 (240-451)||(39083639-39083850)
chr4 (245-444)||(39189387-39189586)
chr4 (499-675)||(32652358-32652534)
chr4 (249-451)||(44994200-44994402)
chr4 (234-451)||(42880674-42880885)
chr4 (499-675)||(43779556-43779732)
chr4 (499-675)||(44993976-44994152)
chr4 (499-675)||(39083898-39084074)
chr4 (499-675)||(39921753-39921929)
chr4 (499-675)||(42880450-42880626)
chr4 (499-675)||(5484799-5484975)
chr4 (499-588)||(39189641-39189730)
chr4 (240-345)||(5486038-5486143)
chr4 (248-363)||(6999268-6999383)
chr4 (280-402)||(13450943-13451064)
chr4 (283-364)||(15450383-15450464)
chr4 (279-363)||(25995080-25995164)
chr4 (241-364)||(32653598-32653721)
chr4 (240-345)||(39922993-39923098)
chr4 (282-363)||(13450272-13450353)
chr4 (240-345)||(44558512-44558617)
chr4 (378-442)||(11255841-11255905)
chr4 (238-329)||(47941809-47941900)
chr4 (248-345)||(42879283-42879380)
chr4 (248-345)||(44992816-44992913)
chr4 (381-442)||(51012087-51012148)
chr4 (240-363)||(35996063-35996186)
chr4 (378-440)||(4519535-4519597)
chr4 (239-353)||(35997745-35997859)
chr4 (240-313)||(2350558-2350631)
chr4 (248-345)||(2828397-2828494)
chr4 (240-345)||(10372725-10372830)
chr4 (248-345)||(39085138-39085235)
chr4 (248-353)||(44792942-44793047)
chr4 (381-437)||(2827566-2827622)
chr4 (381-437)||(35996225-35996281)
chr4 (381-437)||(51041837-51041893)
[»] chr7 (46 HSPs)
chr7 (239-451)||(4322485-4322697)
chr7 (240-451)||(45463670-45463881)
chr7 (239-451)||(48303562-48303774)
chr7 (240-451)||(34690995-34691206)
chr7 (499-667)||(48303346-48303514)
chr7 (499-675)||(45463929-45464105)
chr7 (499-675)||(34691254-34691430)
chr7 (499-675)||(4322264-4322437)
chr7 (245-322)||(30109708-30109785)
chr7 (255-363)||(34785080-34785188)
chr7 (282-364)||(34692715-34692797)
chr7 (182-238)||(21026961-21027017)
chr7 (280-364)||(48302191-48302275)
chr7 (239-345)||(30108564-30108670)
chr7 (248-345)||(46810713-46810810)
chr7 (186-238)||(28172241-28172293)
chr7 (303-374)||(29996504-29996575)
chr7 (381-440)||(38613625-38613684)
chr7 (240-363)||(46996703-46996826)
chr7 (240-331)||(47341719-47341810)
chr7 (305-363)||(11682846-11682904)
chr7 (237-331)||(38613514-38613608)
chr7 (279-332)||(48704248-48704302)
chr7 (248-293)||(23955323-23955368)
chr7 (248-345)||(36762666-36762763)
chr7 (201-238)||(40346071-40346108)
chr7 (238-329)||(8423316-8423407)
chr7 (303-374)||(20478105-20478176)
chr7 (381-440)||(23953967-23954026)
chr7 (248-363)||(33038798-33038913)
chr7 (378-437)||(47341588-47341647)
chr7 (303-376)||(56393-56466)
chr7 (381-442)||(1546449-1546510)
chr7 (248-345)||(4321046-4321143)
chr7 (248-353)||(8421424-8421529)
chr7 (248-353)||(35342433-35342538)
chr7 (240-329)||(35344325-35344414)
chr7 (248-345)||(45465170-45465267)
chr7 (381-442)||(46439431-46439492)
chr7 (248-345)||(46994668-46994765)
chr7 (337-377)||(1546384-1546424)
chr7 (389-441)||(2492496-2492548)
chr7 (248-376)||(27955378-27955506)
chr7 (378-442)||(30940326-30940390)
chr7 (382-438)||(35693275-35693331)
chr7 (381-437)||(40784508-40784564)
[»] chr2 (29 HSPs)
chr2 (239-451)||(28246662-28246874)
chr2 (245-451)||(11022926-11023131)
chr2 (235-444)||(38148490-38148700)
chr2 (499-675)||(11022702-11022878)
chr2 (51-203)||(31638682-31638834)
chr2 (499-675)||(38148755-38148931)
chr2 (499-667)||(28246922-28247090)
chr2 (248-442)||(11315258-11315451)
chr2 (116-238)||(19271242-19271366)
chr2 (245-329)||(39561-39645)
chr2 (276-360)||(38149986-38150069)
chr2 (250-377)||(39664755-39664882)
chr2 (248-345)||(28248161-28248258)
chr2 (305-377)||(17946159-17946231)
chr2 (303-377)||(7744106-7744180)
chr2 (248-329)||(41144-41225)
chr2 (248-345)||(11021541-11021638)
chr2 (240-345)||(37417273-37417378)
chr2 (245-345)||(25619665-25619765)
chr2 (304-374)||(37020572-37020642)
chr2 (381-438)||(6797669-6797726)
chr2 (381-442)||(10716804-10716865)
chr2 (381-442)||(14389005-14389066)
chr2 (240-329)||(15372499-15372588)
chr2 (381-442)||(17946256-17946317)
chr2 (378-431)||(37417432-37417485)
chr2 (240-329)||(41706539-41706628)
chr2 (378-442)||(40560382-40560446)
chr2 (378-442)||(42519126-42519190)
[»] chr1 (31 HSPs)
chr1 (239-451)||(5783363-5783575)
chr1 (499-675)||(5783623-5783799)
chr1 (250-377)||(34778125-34778252)
chr1 (240-363)||(42134482-42134605)
chr1 (303-374)||(46583546-46583617)
chr1 (304-376)||(33602632-33602704)
chr1 (255-331)||(34041828-34041904)
chr1 (182-238)||(38586157-38586213)
chr1 (378-437)||(42134641-42134700)
chr1 (239-345)||(18183962-18184068)
chr1 (381-442)||(2869741-2869802)
chr1 (381-442)||(26225455-26225516)
chr1 (381-442)||(34778040-34778101)
chr1 (250-374)||(4855956-4856080)
chr1 (378-442)||(15104600-15104664)
chr1 (381-441)||(18183846-18183906)
chr1 (378-442)||(27087441-27087505)
chr1 (303-374)||(9121658-9121729)
chr1 (378-437)||(45380890-45380949)
chr1 (239-345)||(5784853-5784959)
chr1 (162-235)||(26765376-26765450)
chr1 (239-313)||(27940607-27940681)
chr1 (239-345)||(33679258-33679364)
chr1 (381-442)||(4855868-4855929)
chr1 (248-345)||(11152553-11152650)
chr1 (248-353)||(27952478-27952583)
chr1 (248-345)||(31803686-31803783)
chr1 (240-313)||(33685299-33685372)
chr1 (382-442)||(3013371-3013431)
chr1 (381-437)||(46638713-46638769)
chr1 (305-377)||(51121970-51122042)
[»] chr8 (24 HSPs)
chr8 (239-451)||(40020548-40020760)
chr8 (246-451)||(28433629-28433834)
chr8 (499-675)||(28433404-28433580)
chr8 (499-667)||(40020332-40020500)
chr8 (240-364)||(23811532-23811656)
chr8 (240-345)||(32822361-32822466)
chr8 (250-372)||(27691164-27691286)
chr8 (248-364)||(9184391-9184507)
chr8 (378-442)||(13108258-13108322)
chr8 (378-442)||(38547386-38547450)
chr8 (238-329)||(31201178-31201269)
chr8 (240-363)||(42897775-42897898)
chr8 (381-442)||(5036611-5036672)
chr8 (378-442)||(8609709-8609773)
chr8 (263-363)||(11031452-11031552)
chr8 (312-364)||(28432293-28432345)
chr8 (378-437)||(42897680-42897739)
chr8 (279-377)||(8609794-8609892)
chr8 (383-437)||(8654663-8654717)
chr8 (303-377)||(13108343-13108417)
chr8 (303-377)||(38547291-38547365)
chr8 (392-442)||(42941947-42941997)
chr8 (248-345)||(31823462-31823559)
chr8 (248-345)||(40019164-40019261)
[»] chr3 (32 HSPs)
chr3 (240-451)||(41944576-41944785)
chr3 (499-675)||(41944833-41945009)
chr3 (279-363)||(30501156-30501240)
chr3 (248-360)||(40963369-40963481)
chr3 (240-364)||(41946066-41946190)
chr3 (303-374)||(44794270-44794341)
chr3 (303-374)||(3152228-3152299)
chr3 (237-332)||(48635372-48635467)
chr3 (235-345)||(23774147-23774257)
chr3 (378-440)||(31887355-31887417)
chr3 (378-442)||(2226074-2226138)
chr3 (240-376)||(40508899-40509035)
chr3 (303-374)||(2660275-2660346)
chr3 (240-363)||(48633877-48634000)
chr3 (381-442)||(7884795-7884856)
chr3 (380-437)||(23888678-23888735)
chr3 (248-345)||(45897058-45897155)
chr3 (238-331)||(51454283-51454376)
chr3 (381-442)||(53190681-53190742)
chr3 (378-442)||(30599839-30599903)
chr3 (389-441)||(33113083-33113135)
chr3 (240-363)||(31887453-31887576)
chr3 (250-377)||(53190766-53190893)
chr3 (384-442)||(35905634-35905692)
chr3 (384-442)||(54898601-54898659)
chr3 (381-442)||(17515472-17515533)
chr3 (381-442)||(23293091-23293152)
chr3 (248-345)||(23887206-23887303)
chr3 (248-345)||(33111849-33111946)
chr3 (240-345)||(33113199-33113304)
chr3 (381-442)||(41977911-41977972)
chr3 (389-437)||(48634051-48634099)
[»] chr5 (27 HSPs)
chr5 (240-451)||(42620676-42620887)
chr5 (499-675)||(42620452-42620628)
chr5 (248-364)||(1344781-1344897)
chr5 (240-345)||(38596868-38596973)
chr5 (248-345)||(32089911-32090008)
chr5 (238-331)||(43318093-43318186)
chr5 (378-442)||(17574476-17574540)
chr5 (283-364)||(1343264-1343345)
chr5 (381-442)||(7268004-7268065)
chr5 (248-345)||(18726573-18726670)
chr5 (248-345)||(33257746-33257843)
chr5 (255-332)||(38176647-38176724)
chr5 (255-332)||(38203871-38203948)
chr5 (248-332)||(40330514-40330598)
chr5 (250-377)||(17574328-17574455)
chr5 (378-437)||(18728508-18728567)
chr5 (303-374)||(29621771-29621842)
chr5 (250-377)||(30468267-30468394)
chr5 (378-437)||(32087673-32087732)
chr5 (240-363)||(35395333-35395456)
chr5 (382-437)||(35395494-35395549)
chr5 (303-374)||(42473597-42473668)
chr5 (282-360)||(6116868-6116946)
chr5 (309-370)||(2854321-2854382)
chr5 (406-442)||(27349333-27349369)
chr5 (237-329)||(32835873-32835965)
chr5 (237-345)||(42619286-42619394)
[»] scaffold0058 (2 HSPs)
scaffold0058 (303-374)||(3357-3428)
scaffold0058 (303-374)||(4529-4600)
[»] scaffold0477 (1 HSPs)
scaffold0477 (238-329)||(6669-6760)
[»] scaffold1454 (1 HSPs)
scaffold1454 (378-442)||(1421-1485)
[»] scaffold0564 (1 HSPs)
scaffold0564 (381-442)||(8422-8483)


Alignment Details
Target: chr6 (Bit Score: 172; Significance: 4e-92; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 240 - 451
Target Start/End: Complemental strand, 17952166 - 17951955
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17952066 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 17951967  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  17951966 aaaatacgaaaa 17951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 240 - 444
Target Start/End: Complemental strand, 35175987 - 35175783
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||||||| |||||||| |||||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| |||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35175887 catcaatttcgtccctccgtccaaaaggtctgatagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 35175788  T
Q  440 aaaat 444  Q
    |||||    
T  35175787 aaaat 35175783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 17951907 - 17951731
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17951907 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 17951808  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  17951807 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatc 17951731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 34344065 - 34344241
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  34344065 acccctatgtttcccattaccatacatcctcacatttcatacagaacgcatcaactaagtccctggttgttcttcttccctccattttcacttctccaag 34344164  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||    
T  34344165 atcatcatcctctccagcgatcaagcttgcatttttgaaggaagatttcgtctgttttaaaggtaacttcgttcatc 34344241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 501 - 675
Target Start/End: Complemental strand, 35175726 - 35175553
Alignment:
Q  501 ccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaagat 600  Q
    ||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35175726 ccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaagat 35175627  T
Q  601 catcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||| |||||||| |||||||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  35175626 catcatcctctccggcgatcaagattgcatttttgaaggaaga-ttcgtctgttttgaaggtaacttcgttcatc 35175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 244 - 409
Target Start/End: Original strand, 34343847 - 34344004
Alignment:
Q  244 aaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt-gtttgatgtccat 342  Q
    |||||||||||||||||| |||||||||| | ||||| |||||| |||| |||||| |||||||||||         ||| ||||| |||||| ||||||    
T  34343847 aaaccatcaatttcgtccttgaatttttaagaattggtcaaatttgtcctccaatttaacgaaatatc---------cctcaattttgtttgacgtccat 34343937  T
Q  343 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagg 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34343938 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagg 34344004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 34345415 - 34345291
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    ||||||| |||||| || ||||||||||||  |  ||| | |||||| |||||| ||||| || ||||||||||||||||||||||||||||   ||| |    
T  34345415 gagtaaatcatcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgtaaaatgcc 34345316  T
Q  340 catcaatttcgtccctccgtccaaa 364  Q
      ||||||| |||||||||||||||    
T  34345315 tgtcaattttgtccctccgtccaaa 34345291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 17950561 - 17950666
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||| |||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  |||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 17950660  T
Q  340 catcaa 345  Q
     |||||    
T  17950661 aatcaa 17950666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 24662522 - 24662571
Alignment:
Q  282 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  24662522 caaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgt 24662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 4289419 - 4289542
Alignment:
Q  241 agtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtcc 340  Q
    |||||| |||||| || || |||||||||  |  ||| || |||||||||||| ||||| || |||||||||||||||||||| |||||||   ||| |     
T  4289419 agtaaatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatttaatgaaatatcaaaatagtccctaaatttgtaaaatgcct 4289518  T
Q  341 atcaatttcgtccctccgtccaaa 364  Q
     ||||||| |||||||||||||||    
T  4289519 gtcaattttgtccctccgtccaaa 4289542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 377
Target Start/End: Complemental strand, 13613664 - 13613569
Alignment:
Q  282 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||  ||||   |||||||||||| ||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||    
T  13613664 caaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtccattagtg 13613569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 4641353 - 4641444
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||| |||||    ||||||||||  || |||||||||||    
T  4641353 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 3018541 - 3018451
Alignment:
Q  255 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||||||||||||| | |  | |||||| |||||||| |||||   |||||||||||  ||||||||||||||||  || |||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 3018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 10568561 - 10568622
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||| ||||||||||    
T  10568561 tgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggactaatttgatggaaa 10568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 345
Target Start/End: Original strand, 29077325 - 29077433
Alignment:
Q  237 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgat 336  Q
    ||||||| ||||||||| |||||||||||||||| | |  | ||||||||| ||||| |||||   |||||| ||||  |  |||||||||||||  ||     
T  29077325 atcgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagac 29077424  T
Q  337 gtccatcaa 345  Q
    |||||||||    
T  29077425 gtccatcaa 29077433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 4e-92; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 5484540 - 5484751
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5484640 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 5484739  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  5484740 aaaatacgaaaa 5484751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 239 - 451
Target Start/End: Complemental strand, 43779992 - 43779780
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| |||| ||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  43779992 cgagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 43779893  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43779892 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 43779793  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  43779792 gaaaatacgaaaa 43779780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 39921494 - 39921705
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  39921594 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacatgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39921693  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  39921694 aaaatacgaaaa 39921705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 243 - 451
Target Start/End: Original strand, 32652102 - 32652310
Alignment:
Q  243 taaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccat 342  Q
    |||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  32652102 taaaccatcaatttcgtcactgaattttcagggttcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccat 32652201  T
Q  343 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  32652202 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttatacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaa 32652301  T
Q  443 atgcgaaaa 451  Q
    || ||||||    
T  32652302 atacgaaaa 32652310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 39083639 - 39083850
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  39083739 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39083838  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  39083839 aaaatacgaaaa 39083850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 245 - 444
Target Start/End: Original strand, 39189387 - 39189586
Alignment:
Q  245 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 344  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  39189387 aaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 39189486  T
Q  345 atttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaat 444  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  39189487 atttcgtccctccgtccaaaaggtccgttaatgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaat 39189586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 32652358 - 32652534
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32652358 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 32652457  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||    
T  32652458 atcatcatcctctccggcgatcaagcttgcatttttgaaggaagattttgtctgttttgaaggtaacttcgttcatc 32652534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 249 - 451
Target Start/End: Complemental strand, 44994402 - 44994200
Alignment:
Q  249 atcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaattt 348  Q
    ||||||||| ||||| |||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44994402 atcaatttcatccctaaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattt 44994303  T
Q  349 cgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaatgcga 448  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||    
T  44994302 cgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcatgtgtacagggactaaattgatggaaaatacga 44994203  T
Q  449 aaa 451  Q
    |||    
T  44994202 aaa 44994200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 234 - 451
Target Start/End: Complemental strand, 42880885 - 42880674
Alignment:
Q  234 tagatcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgttt 333  Q
    ||||| |||| |||||||||||| ||||||||||||| |||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  42880885 tagatagagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgttt 42880786  T
Q  334 gatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaat 433  Q
    || |||||||||||||||||||      |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  42880785 gacgtccatcaatttcgtccct------aaaaggtccgttagtgtgctgtgttgacttgtacacgtgggaaaaagaaagccacgtgtacagggactaaat 42880692  T
Q  434 tgatggaaaatgcgaaaa 451  Q
    ||||||||||| ||||||    
T  42880691 tgatggaaaatacgaaaa 42880674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 43779732 - 43779556
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43779732 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 43779633  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  43779632 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 43779556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 44994152 - 44993976
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44994152 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 44994053  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  44994052 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 44993976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 39083898 - 39084074
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  39083898 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 39083997  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  39083998 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatc 39084074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 39921753 - 39921929
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39921753 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 39921852  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  39921853 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatc 39921929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 42880626 - 42880450
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  42880626 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctttctgttcttcttccctccattttcacttctccaag 42880527  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  42880526 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 42880450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 5484799 - 5484975
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  5484799 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 5484898  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||| |||||| || |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  5484899 atcatcttcctcttcggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatc 5484975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 499 - 588
Target Start/End: Original strand, 39189641 - 39189730
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttca 588  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  39189641 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccatccattttca 39189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 5486143 - 5486038
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||  |||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgttaaatgtc 5486044  T
Q  340 catcaa 345  Q
     |||||    
T  5486043 aatcaa 5486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 363
Target Start/End: Complemental strand, 6999383 - 6999268
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||||||||||| |||||||  | | || ||||||||||||||  ||||| || ||||||||||||||||| ||||||||||   || || |||||||    
T  6999383 catcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgtaaaatatcaatcaatt 6999284  T
Q  348 tcgtccctccgtccaa 363  Q
    | ||||||||||||||    
T  6999283 tagtccctccgtccaa 6999268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 402
Target Start/End: Complemental strand, 13451064 - 13450943
Alignment:
Q  280 gccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtg 379  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |  || |||||||||  | |||||||| |||||| | || ||||   ||    
T  13451064 gccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta-catg 13450966  T
Q  380 ctgtgttggcttgtacacgtggg 402  Q
     ||||||| ||||||||||||||    
T  13450965 ttgtgttgtcttgtacacgtggg 13450943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 15450464 - 15450383
Alignment:
Q  283 aaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 364  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||   |||| | ||||||| |||||||||||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtaaaatgttcgtcaattttgtccctccgtccaaa 15450383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 363
Target Start/End: Complemental strand, 25995164 - 25995080
Alignment:
Q  279 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 363  Q
    |||||||||  |||||||||| ||||||||||||||||||| |||||||||||   ||||| ||||||||  |||||||||||||    
T  25995164 ggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgtaaaatgtcaatcaatttattccctccgtccaa 25995080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 32653721 - 32653598
Alignment:
Q  241 agtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtcc 340  Q
    |||||| |||||| || || |||||||||  |  ||| || |||||||||||  ||||| ||||||||||||||||||| |||||||||||   |||| |    
T  32653721 agtaaatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgtaaaatgttc 32653622  T
Q  341 atcaatttcgtccctccgtccaaa 364  Q
     ||||||| |||||||||||||||    
T  32653621 gtcaattttgtccctccgtccaaa 32653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 39923098 - 39922993
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||||||||||||||||||  | | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  |||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 39922999  T
Q  340 catcaa 345  Q
     |||||    
T  39922998 aatcaa 39922993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 363
Target Start/End: Complemental strand, 13450353 - 13450272
Alignment:
Q  282 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 363  Q
    |||||| ||||||||||| ||| |||||| ||||||||||||||||||||    |||| |||||||| || |||||||||||    
T  13450353 caaatttgtcccccaatttaacaaaatatgaaaatagtccctgaatttgtaaagtgtcaatcaatttagtacctccgtccaa 13450272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 44558617 - 44558512
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 44558518  T
Q  340 catcaa 345  Q
    ||||||    
T  44558517 catcaa 44558512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 11255905 - 11255841
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  11255905 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 11255841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 47941809 - 47941900
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||| ||||||||||||||| || | || |||||||||| | |||||   |||||||||||  || |||||||||||    
T  47941809 tcgagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaattt 47941900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 42879283 - 42879380
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  42879283 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtcaatcaa 42879380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 44992816 - 44992913
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||| ||||||  ||||| |||||    
T  44992816 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatgtcaatcaa 44992913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 51012087 - 51012148
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  51012087 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 51012148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 35996063 - 35996186
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| |||||||||||| ||| ||| ||||||| || | || |||||||||||| ||||||  | |||||||||  || ||||||||||| |  || |||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtc 35996162  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  35996163 catcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 4519535 - 4519597
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 440  Q
    |||||||||| ||||||||||||| |||||| ||| ||| ||| || ||||||| ||||||||    
T  4519535 tgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgtgttcaaggactaatttgatgga 4519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 353
Target Start/End: Complemental strand, 35997859 - 35997745
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| || |||||| || ||||||||||||| | || | |||||||||||| || |||||  | ||||||||||  || ||||||||||||||   |||    
T  35997859 cgagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgttaattgt 35997760  T
Q  339 ccatcaatttcgtcc 353  Q
    | |||||||| ||||    
T  35997759 caatcaatttagtcc 35997745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 2350631 - 2350558
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 313  Q
    |||| |||||||||||| ||||||||||||| | || | ||||||||| ||||| |||||   |||||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaa 2350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 2828494 - 2828397
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| || ||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  2828494 catcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaatcaa 2828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 10372830 - 10372725
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| |||||||||||||||| | |  | ||||||||| ||||| |||||   |||||||||||  |  |||||||||||||  || |||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtc 10372731  T
Q  340 catcaa 345  Q
    ||||||    
T  10372730 catcaa 10372725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 39085235 - 39085138
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | || ||| |||||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  39085235 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtcaatcaa 39085138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 44792942 - 44793047
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 44793041  T
Q  348 tcgtcc 353  Q
    | ||||    
T  44793042 tagtcc 44793047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 2827566 - 2827622
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||| ||||||| ||||| || ||||||||||| ||| |||||||||| |||||    
T  2827566 tgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 2827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 35996225 - 35996281
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  35996225 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Complemental strand, 51041893 - 51041837
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||| ||| ||||||||| || ||||||||||||||| || ||||||| |||||    
T  51041893 tgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgat 51041837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 3e-90; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 239 - 451
Target Start/End: Complemental strand, 4322697 - 4322485
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  4322697 cgagtaaaccatcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacat 4322598  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  4322597 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcacgtgtacagggactaaattgatg 4322498  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  4322497 gaaaatacgaaaa 4322485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 45463670 - 45463881
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  45463770 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 45463869  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  45463870 aaaatacgaaaa 45463881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 239 - 451
Target Start/End: Complemental strand, 48303774 - 48303562
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    |||||||||||||||||||||||||||||||| || ||| || ||||| ||||| | |||| ||| ||||||||||||||||||||||||| ||||| ||    
T  48303774 cgagtaaaccatcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctctaatttaacaaaatatcaaaatagtccctgaatttatttgacgt 48303675  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||     
T  48303674 ccatcaatttcgtccctccgtccaaaaggtctgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgata 48303575  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  48303574 gaaaatacgaaaa 48303562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 34690995 - 34691206
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||||| |||||||||| ||| |||    
T  34690995 gagtaaaccatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtc 34691094  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    |||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||    
T  34691095 catcaatttcgtccctccatccaaaaggtatgttagtgtgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgatgg 34691194  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  34691195 aaaatacgaaaa 34691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 499 - 667
Target Start/End: Complemental strand, 48303514 - 48303346
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  48303514 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaattaagtccctgtctgttcttcttccctccattttcacttctccaag 48303415  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaactt 667  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  48303414 atcatcatcctctccggcgatcaagcttgcattttagaaggaagatttcgtctgttttgaaggtaactt 48303346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 45463929 - 45464105
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    ||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  45463929 acccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 45464028  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  45464029 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatc 45464105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 34691254 - 34691430
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  34691254 acccctatgttttccactaccatacatcctcacatttcatacagaacacatcaactaagtcactgtttgttcttcttccctccattttcacttctccaag 34691353  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||||    
T  34691354 atcatcatcctctccggtgatcaagcttgcattttttaaggaagaattcgttcattttgaaggtaacttcgttcatc 34691430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 4322437 - 4322264
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  4322437 acccctatgtttgccattaccatacatgctcacctttcatacagaacacatcaactaagtccctgtctgttcttc---cctccattttcacttctccaag 4322341  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  4322340 atcatcatcctctccggcaatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 4322264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 30109785 - 30109708
Alignment:
Q  245 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccc 322  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||    
T  30109785 aaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccc 30109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 363
Target Start/End: Complemental strand, 34785188 - 34785080
Alignment:
Q  255 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccc 354  Q
    ||||||||||||||| || | || ||||||| |||||| |||| | |||||||||||||||||||||||||||||||   ||||| |||||||| |||||    
T  34785188 ttcgtccctgaatttgtacgaatcggccaaagtcgtcctccaaattaacgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccc 34785089  T
Q  355 tccgtccaa 363  Q
    |||||||||    
T  34785088 tccgtccaa 34785080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 34692797 - 34692715
Alignment:
Q  282 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 364  Q
    |||||| || || ||||| |||||||||| ||||||||||||||||||||   |||||||||||||| |||||||||||||||    
T  34692797 caaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtccatcaattttgtccctccgtccaaa 34692715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 21027017 - 21026961
Alignment:
Q  182 tcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 238  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  21027017 tcataataaataaataaataaaaaacagcagttttggaaagagagaataacatagat 21026961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 48302191 - 48302275
Alignment:
Q  280 gccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 364  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||   |||| | ||||||| |||| ||||||||||    
T  48302191 gccaaattcgtccctcaatttaacgaaatatcaaaatagtctctgaatttgtaaaatgttcgtcaattttgtccttccgtccaaa 48302275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 30108564 - 30108670
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| || |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||    
T  30108564 cgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 30108663  T
Q  339 ccatcaa 345  Q
    | |||||    
T  30108664 caatcaa 30108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 46810713 - 46810810
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | |||| ||||||||| ||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  46810713 catcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 46810810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 28172241 - 28172293
Alignment:
Q  186 aataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 238  Q
    ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  28172241 aataaataaataaatacaaaacagcaattttgaaaagagagagaaacatagat 28172293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 29996575 - 29996504
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| || |||||||||||    || ||||||||| ||||||||||| ||||||||||||||||    
T  29996575 cgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtccgtta 29996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 440
Target Start/End: Original strand, 38613625 - 38613684
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 440  Q
    ||||||| |||||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  38613625 tgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgatgga 38613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 363
Target Start/End: Complemental strand, 46996826 - 46996703
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| |||||||||||||||| | |  | |||||| |||||||| |||||   |||||||||||  ||||| ||||||||||  || |||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtc 46996727  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  46996726 catcaaaaaggtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 47341810 - 47341719
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    |||| ||||||||| ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||    
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 11682846 - 11682904
Alignment:
Q  305 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 363  Q
    |||||||||| |||||| |||||| ||| || |||||||||||| ||||||||||||||    
T  11682846 aaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaa 11682904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 38613608 - 38613514
Alignment:
Q  237 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    ||||||| ||||||||| ||||||| | |||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||    
T  38613608 atcgagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 48704248 - 48704302
Alignment:
Q  279 ggccaaattcgtcccccaattg-aacgaaatatcaaaatagtccctgaatttgtt 332  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| |||||||||    
T  48704248 ggccaaattcgtcccccagttttaacgaaatatcaaaatagtccccgaatttgtt 48704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 23955368 - 23955323
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtccc 293  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||    
T  23955368 catcaacttcgtctctgaatttttatggattggccaaattcgtccc 23955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 36762763 - 36762666
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||||| |||||    ||||||||||  ||  |||||||||||||  ||||| |||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgttaaatgtcaatcaa 36762666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 40346071 - 40346108
Alignment:
Q  201 aaaaaacagcagttttggaaagagagagaaacatagat 238  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  40346071 aaaaaacagcagttttggaaagagagaaaaacatagat 40346108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 8423407 - 8423316
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||| ||||||||||||| | || |  |||||||| ||||| |||||   |||||||||||  || |||||||||||    
T  8423407 tcgagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 20478105 - 20478176
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  20478105 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 20478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 440
Target Start/End: Original strand, 23953967 - 23954026
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 440  Q
    ||||||| ||||||||||||| |||||||||||||| ||| |  ||||||| ||||||||    
T  23953967 tgtgttgtcttgtacacgtggcaaaaaggaagccacgtgttccaggactaatttgatgga 23954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 363
Target Start/End: Complemental strand, 33038913 - 33038798
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| ||||||| |||||||||| || | || ||||||| |||| |||||   |||||||||||  |||||||||||||| |  || |||||||||      
T  33038913 catcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaa 33038814  T
Q  348 tcgtccctccgtccaa 363  Q
      ||||||||||||||    
T  33038813 aggtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 47341647 - 47341588
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  47341647 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 47341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 56393 - 56466
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagt 376  Q
    |||||||||||| ||||||||||||||    || |||||||||||   ||||||||||||||| ||| ||||||    
T  56393 cgaaatatcaaattagtccctgaattttacagacgtccatcaattcactccctccgtccaaaatgtctgttagt 56466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 1546449 - 1546510
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||| || |||||  |||||||||| ||| |||||| ||||||||||||||||||    
T  1546449 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 1546510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 4321046 - 4321143
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| ||||||||  ||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  4321046 catcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 4321143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 8421424 - 8421529
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  8421424 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 8421523  T
Q  348 tcgtcc 353  Q
    | ||||    
T  8421524 tagtcc 8421529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 35342433 - 35342538
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| || ||||||||||| ||| || | ||||||||| ||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  35342433 catcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 35342532  T
Q  348 tcgtcc 353  Q
    | ||||    
T  35342533 tagtcc 35342538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 35344414 - 35344325
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||| |||||||||||| ||||| ||||||| | || |  |||||||||||||| |||||   |||||||||||  || |||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 45465267 - 45465170
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| ||||||| |||||||||| || | || ||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  45465267 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 46439492 - 46439431
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || | || |||||| |||||| ||||||||||||||||||    
T  46439492 tgtgttgtcttgtacacgtgtcaacagggcagccacgtgtacatggactaaattgatggaaa 46439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 46994668 - 46994765
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| |||||||  |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  46994668 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 46994765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 1546384 - 1546424
Alignment:
Q  337 gtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||  | ||||||||||||||||||||||||||||    
T  1546384 gtccatcaaaatggtccctccgtccaaaaggtccgttagtg 1546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 2492496 - 2492548
Alignment:
Q  389 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 441  Q
    ||||||||||||| |||||||||| ||| ||| || ||||||| |||||||||    
T  2492496 cttgtacacgtggcaaaaaggaagtcacgtgttcaaggactaatttgatggaa 2492548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 376
Target Start/End: Original strand, 27955378 - 27955506
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| ||||||| |||||||||| ||||  || |||||| |||| |||||  ||||||||||||  || |  ||||||||||  || |||||||||      
T  27955378 catcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaag 27955477  T
Q  348 tcgtccctccgtccaaaaggtccgttagt 376  Q
      ||||||||||||||  | |||||||||    
T  27955478 aggtccctccgtccaagtgctccgttagt 27955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 30940390 - 30940326
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| | ||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  30940390 tgctgtgttgtcctgtacacatgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 30940326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 438
Target Start/End: Complemental strand, 35693331 - 35693275
Alignment:
Q  382 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    |||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||    
T  35693331 gtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 35693275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 40784508 - 40784564
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||| ||| ||||||||| || ||||||||||||||| || ||||||| |||||    
T  40784508 tgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgat 40784564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 3e-90; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 239 - 451
Target Start/End: Original strand, 28246662 - 28246874
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||    
T  28246662 cgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgt 28246761  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28246762 ccatcaatttcgtccctctgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 28246861  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  28246862 gaaaatacgaaaa 28246874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 245 - 451
Target Start/End: Complemental strand, 11023131 - 11022926
Alignment:
Q  245 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 344  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  11023131 aaccatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 11023033  T
Q  345 atttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaat 444  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11023032 attccgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaat 11022933  T
Q  445 gcgaaaa 451  Q
     ||||||    
T  11022932 acgaaaa 11022926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 235 - 444
Target Start/End: Original strand, 38148490 - 38148700
Alignment:
Q  235 agatcgagtaaaccatcaatttcgtccctgaatttttagggattgg-ccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgttt 333  Q
    |||| ||||||||||||||||||||||||||||||| || ||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  38148490 agattgagtaaaccatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgttt 38148589  T
Q  334 gatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaat 433  Q
    || ||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  38148590 gacgtccatcaatttcgtccatccgtccaaaaggtctgttagtgtgttgtattggcttgtacacgtcggaaaaaggaagccacgtgtacagggactaaat 38148689  T
Q  434 tgatggaaaat 444  Q
    |||||||||||    
T  38148690 tgatggaaaat 38148700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 11022878 - 11022702
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  11022878 acccctatgtttgccattaccatacatcctcatatttcatacataacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 11022779  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  11022778 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 11022702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 51 - 203
Target Start/End: Original strand, 31638682 - 31638834
Alignment:
Q  51 cttaattaattagaggtcatgagtttgaaagctttatcattcatcatgattctatctgatttgaagaaatggatcttctcctgcctttattatttagcca 150  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31638682 cttacttaattagaggtcatgagtttgaaagctttatcatccatcatgattctatctgatttgaagaaatggatcttctcctgcctttattatttaacca 31638781  T
Q  151 tctctaatgtttttcatccacaactgagagctcataataaatgaataaataaa 203  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||    
T  31638782 tctctcatgtttttcatccacaactgagagctcacaacaaatgaataaataaa 31638834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 38148755 - 38148931
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  38148755 acccctatgtttctcattaccatacatcctcacatttcatacagaacacatcaactaagttccagtctgttcttcttccctccattttcacttctccaag 38148854  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||| || ||| ||||||||||| ||||||    
T  38148855 atcatcatcctctcccgcgatcaagcttgcatttttgaaggaagatttcgtctggtttaaaggtaacttcgttcatc 38148931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 499 - 667
Target Start/End: Original strand, 28246922 - 28247090
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| || ||||||    
T  28246922 acccctatgtttaccattaccatacatcctcatatttcatacagaacacatcaactaagtgtctgtctgttcttcttccctccattttcacttgtccaag 28247021  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaactt 667  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  28247022 atcatcatcctctccggcgatcaagattgcatttttgaaggaagattttgtttgttttgaaggtaactt 28247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 442
Target Start/End: Complemental strand, 11315451 - 11315258
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| ||||||| | |||||||| | || |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||  || |||||||||      
T  11315451 catcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaa 11315352  T
Q  348 tcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    | ||||||||||||||| | || | ||   || ||||||| ||||||||||||  || |||||||||||||||||| |||| || ||||||||||    
T  11315351 tggtccctccgtccaaatgttctgcta-catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgatggaaa 11315258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 19271242 - 19271366
Alignment:
Q  116 gaaatggatcttctcctgcctttattatttagccatctctaatgtttttcatccacaa--ctgagagctcataataaatgaataaataaaaaacagcagt 213  Q
    |||||||||| |||| ||||| |||| || ||||| | || |||| |||||||||  |  |||||||||||||| |||| || ||||||| |||||||||    
T  19271242 gaaatggatcctctcttgcctatattgttcagccacccctcatgtgtttcatccaacaggctgagagctcataacaaataaagaaataaataacagcagt 19271341  T
Q  214 tttggaaagagagagaaacatagat 238  Q
    |||||||||||||| |||| |||||    
T  19271342 tttggaaagagagaaaaacgtagat 19271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 39561 - 39645
Alignment:
Q  245 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  39561 aaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 38150069 - 38149986
Alignment:
Q  276 attggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtc 360  Q
    |||||||||||||||||| ||||| |||||||||||||||||||   |||||||||   |||||| ||||||| |||||||||||    
T  38150069 attggccaaattcgtccctcaatttaacgaaatatcaaaatagt-tatgaatttgtaaaatgtccgtcaattttgtccctccgtc 38149986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 377
Target Start/End: Complemental strand, 39664882 - 39664755
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||||||||||||| ||||  |||||||||| |  ||||||||||||||    || |||||||||  |     
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  350 gtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||||||| ||||||||||    
T  39664782 gtccctccgtccaaaagctccgttagtg 39664755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 28248258 - 28248161
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  28248258 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 28248161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 17946159 - 17946231
Alignment:
Q  305 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||  | |||||||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  17946159 aaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 17946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 7744106 - 7744180
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||||  | |||||||||||| | | |||||||||||  | |||||||| |||||||||||||||||||    
T  7744106 cgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtg 7744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 41225 - 41144
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||||||| | || | ||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  41225 catcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 11021541 - 11021638
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  11021541 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 11021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 37417273 - 37417378
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||  ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  340 catcaa 345  Q
    ||||||    
T  37417373 catcaa 37417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 25619665 - 25619765
Alignment:
Q  245 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 344  Q
    ||||||||| ||||||| |||||||||| || | || ||||||| |||| |||||   | |||||||||  ||||||||||||||||   ||||||||||    
T  25619665 aaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatca 25619764  T
Q  345 a 345  Q
    |    
T  25619765 a 25619765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 304 - 374
Target Start/End: Original strand, 37020572 - 37020642
Alignment:
Q  304 gaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    ||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  37020572 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 37020642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 6797669 - 6797726
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||    
T  6797669 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 6797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 10716865 - 10716804
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || ||||||||||| |||||| |||| || ||||||||||    
T  10716865 tgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgatggaaa 10716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 14389066 - 14389005
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||| ||||||||||    
T  14389066 tgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaacttgatggaaa 14389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 15372499 - 15372588
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||| |||||||||||| ||||||||||||| | || | ||||||||||| ||| |||||   | |||||||||  || |||||||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaattt 15372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 17946256 - 17946317
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| | ||||||| ||  |||||||||| ||| |||||| ||||||||||||||||||    
T  17946256 tgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 17946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 37417432 - 37417485
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaa 431  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || |||||||    
T  37417432 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 37417485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 41706539 - 41706628
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||| |||||||||||| || |||||||||| | || | || |||||||||||| |||||   |||||||||||  || |||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 40560382 - 40560446
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| | ||||| ||||  || |||| |||||| |||||| ||||||||||||||||||    
T  40560382 tgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 40560446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 42519190 - 42519126
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| | ||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  42519190 tgctgtgttgtcctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 42519126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 3e-90; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 239 - 451
Target Start/End: Original strand, 5783363 - 5783575
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||    
T  5783363 cgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 5783462  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  5783463 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 5783562  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  5783563 gaaaatacgaaaa 5783575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 5783623 - 5783799
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5783623 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 5783722  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| || ||||||||||||||| ||||||    
T  5783723 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgctttgaaggtaacttcgttcatc 5783799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 377
Target Start/End: Complemental strand, 34778252 - 34778125
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||||| ||||||  ||||   |||||||||||| ||||||||||||||    ||||||||||||  |     
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  350 gtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||||||| ||||||||||    
T  34778152 gtccctccgtccaaaagctccgttagtg 34778125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 42134482 - 42134605
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 42134581  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  42134582 catcaaaaaggtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 46583617 - 46583546
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| || |||||||||||||||||||||||||    
T  46583617 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtccaaaaggtccgtta 46583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 33602704 - 33602632
Alignment:
Q  304 gaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagt 376  Q
    ||||||||||| ||||||||||||||    || |||| |||| || |||||||||||||||||||||||||||    
T  33602704 gaaatatcaaattagtccctgaattttacagacgtccgtcaaattagtccctccgtccaaaaggtccgttagt 33602632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 34041904 - 34041828
Alignment:
Q  255 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    |||||||||||||||  | | || | ||||||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  34041904 ttcgtccctgaatttgcacgaatggaccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgt 34041828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 38586213 - 38586157
Alignment:
Q  182 tcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 238  Q
    |||||| |||| ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  38586213 tcataacaaataaataaataaaaaacaacagttttgaaaagagagaaaaacatagat 38586157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 42134641 - 42134700
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  42134641 tgctgtgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 42134700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 345
Target Start/End: Complemental strand, 18184068 - 18183962
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| ||||||||| ||||||  |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||  || ||    
T  18184068 cgagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 18183969  T
Q  339 ccatcaa 345  Q
    |||||||    
T  18183968 ccatcaa 18183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 2869741 - 2869802
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  2869741 tgtgttgtcctgtacacgtgtcaacaaggcagccacatgtacaaggactaaattgatggaaa 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 26225516 - 26225455
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || || | ||||||||||||| ||||||||||||||||||    
T  26225516 tgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgatggaaa 26225455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 34778101 - 34778040
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  34778101 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 374
Target Start/End: Complemental strand, 4856080 - 4855956
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||||| ||||||  ||||   |||||||||||| ||||||||||||||    || |||||||||  |     
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  350 gtccctccgtccaaaaggtccgtta 374  Q
    ||||||||||||||||| |||||||    
T  4855980 gtccctccgtccaaaagctccgtta 4855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 15104600 - 15104664
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||| ||||||||||    
T  15104600 tgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaa 15104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 18183906 - 18183846
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 441  Q
    ||||||| ||||||||||||| ||||| |||||||| ||| || ||||||| |||||||||    
T  18183906 tgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatggaa 18183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 27087441 - 27087505
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||| ||||||||||||    
T  27087441 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactgaattgatggaaa 27087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 9121729 - 9121658
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  9121729 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 9121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 45380949 - 45380890
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  45380949 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 45380890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 345
Target Start/End: Complemental strand, 5784959 - 5784853
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| || |||||| |||||||||||||||| | || | || ||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||    
T  5784959 cgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 5784860  T
Q  339 ccatcaa 345  Q
    | |||||    
T  5784859 caatcaa 5784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 26765376 - 26765450
Alignment:
Q  162 tttcatcca-caactgagagctcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacata 235  Q
    ||||||||| |||||||||| |||||| |||| || ||||||| ||| ||||||||| ||| ||||| |||||||    
T  26765376 tttcatccaacaactgagagatcataacaaataaagaaataaataactgcagttttgaaaatagagaaaaacata 26765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 27940607 - 27940681
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 313  Q
    ||||| |||||||||||| ||||||||||||| |  | |||| |||||||||||| |||||   |||||||||||    
T  27940607 cgagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaa 27940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 345
Target Start/End: Original strand, 33679258 - 33679364
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| || ||||||||| |||| |||||||||| || |  |||||||||||||| |||||   |||||||||||  || ||| ||||||||||  ||||    
T  33679258 cgagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgt 33679357  T
Q  339 ccatcaa 345  Q
    | |||||    
T  33679358 caatcaa 33679364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 4855929 - 4855868
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  4855929 tgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 4855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 11152553 - 11152650
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || |||| |||||||||  ||||| |||||    
T  11152553 catcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtcaatcaa 11152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 27952583 - 27952478
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 27952484  T
Q  348 tcgtcc 353  Q
    | ||||    
T  27952483 tagtcc 27952478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 31803783 - 31803686
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| |||||||  |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  31803783 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 31803686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 33685372 - 33685299
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 313  Q
    |||| ||||||||| |||||||||||||||||| || | || ||||||| |||| |||||   |||||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaa 33685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 3013431 - 3013371
Alignment:
Q  382 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||| | ||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  3013431 gtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 3013371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Complemental strand, 46638769 - 46638713
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||| ||||||| ||||| |||||||||||||| ||| ||||||| || |||||    
T  46638769 tgtgttgtcttgtacgcgtggcaaaaaggaagccacgtgttcagggacgaatttgat 46638713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 51121970 - 51122042
Alignment:
Q  305 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||  | |||||||||||| | | | |||||||||  | |||||||||||||||||||| |||||||    
T  51121970 aaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtg 51122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 7e-88; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 239 - 451
Target Start/End: Complemental strand, 40020760 - 40020548
Alignment:
Q  239 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 338  Q
    ||||| ||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  40020760 cgagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 40020661  T
Q  339 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  40020660 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaaaccacgtgtacagggactaaattgatg 40020561  T
Q  439 gaaaatgcgaaaa 451  Q
    |||||| ||||||    
T  40020560 gaaaatacgaaaa 40020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 246 - 451
Target Start/End: Complemental strand, 28433834 - 28433629
Alignment:
Q  246 accatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcga 28433735  T
Q  346 tttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaatg 445  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||     
T  28433734 tttcgtccctccgtccaaaaggttcgttagtttgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaata 28433635  T
Q  446 cgaaaa 451  Q
    ||||||    
T  28433634 cgaaaa 28433629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 28433580 - 28433404
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  28433580 acccctatgtttcccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatctattcttcttccctccattttcacttctccaag 28433481  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  28433480 atcatcatcctctccggcgatcaagcttgcatttttgaaagaagatttcgtctgttttgaaggtaacttcattcatc 28433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 499 - 667
Target Start/End: Complemental strand, 40020500 - 40020332
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40020500 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtctctgtctgttcttcttccctccattttcacttctccaag 40020401  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaactt 667  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  40020400 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtttgttttgaaggtaactt 40020332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 23811656 - 23811532
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||||||  ||||| ||||||||||||||   | |||| |||||||||||||||||||||  || ||||||||||||||||| |||||||||   |||||    
T  23811656 gagtaaattatcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgtc 23811557  T
Q  340 catcaatttcgtccctccgtccaaa 364  Q
      |||||||||||||||||||||||    
T  23811556 agtcaatttcgtccctccgtccaaa 23811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 32822361 - 32822466
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||||| |||| |||||||||| |||| |||||     |||||||||  ||||||||||||||||  ||||||    
T  32822361 gagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtc 32822460  T
Q  340 catcaa 345  Q
    ||||||    
T  32822461 catcaa 32822466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 372
Target Start/End: Original strand, 27691164 - 27691286
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||| ||||||||  ||||   |||||||||||| ||||||||||||||    || ||||||||| | |    
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  350 gtccctccgtccaaaaggtccgt 372  Q
    |||||||||||||||||||||||    
T  27691264 gtccctccgtccaaaaggtccgt 27691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 9184391 - 9184507
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||||||||||| |||||||  | | || ||||||||||||| ||||| |   |||||||||||| ||||||||||||||||  || ||| ||| |      
T  9184391 catcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaa 9184490  T
Q  348 tcgtccctccgtccaaa 364  Q
    | |||||||||||||||    
T  9184491 tggtccctccgtccaaa 9184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 13108322 - 13108258
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  13108322 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 13108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 38547386 - 38547450
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  38547386 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 38547450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 31201269 - 31201178
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||  |||||   |||||||||||  || |||||||||||    
T  31201269 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaattt 31201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 363
Target Start/End: Complemental strand, 42897898 - 42897775
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| | ||||| |||||||||| || | ||||||||||||||| |||||    ||||||||||  |||||| |||||||||  || |||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 42897799  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  42897798 catcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 5036611 - 5036672
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  5036611 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 5036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 8609773 - 8609709
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||   | |||| |||||| |||||| ||||||||||||||||||    
T  8609773 tgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgatggaaa 8609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 11031452 - 11031552
Alignment:
Q  263 tgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtcca 362  Q
    ||||||| || |||| ||||||| |||| | ||||||   |||||||||||| |||| ||||| |||||   ||||| |||||||| |||||||||||||    
T  11031452 tgaatttgtaaggatgggccaaaatcgttctccaattatgcgaaatatcaaattagttcctgagtttgtcatatgtcaatcaatttagtccctccgtcca 11031551  T
Q  363 a 363  Q
    |    
T  11031552 a 11031552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 28432293 - 28432345
Alignment:
Q  312 aaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 364  Q
    ||||||||||||||||||||   |||||| ||||||| |||||||||||||||    
T  28432293 aaaatagtccctgaatttgtaaaatgtccgtcaattttgtccctccgtccaaa 28432345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 42897739 - 42897680
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  42897739 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 42897680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 377
Target Start/End: Complemental strand, 8609892 - 8609794
Alignment:
Q  279 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  | ||||||||||||||||| ||||||||||    
T  8609892 ggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 8609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 8654663 - 8654717
Alignment:
Q  383 tgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||| ||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  8654663 tgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 8654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 13108417 - 13108343
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||||| ||||||||||||||    || |||||||||  | ||||||||||||||||| | ||||||||    
T  13108417 cgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtg 13108343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 38547291 - 38547365
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 377  Q
    |||||||||||| ||||||||||||||    || |||||||||  | |||||||| |||||||| ||||||||||    
T  38547291 cgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtg 38547365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 42941947 - 42941997
Alignment:
Q  392 gtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  42941947 gtacacgtgtcaacaaggcagccacatgtacaaggactaaattgatggaaa 42941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 31823559 - 31823462
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || ||||| ||||||||  ||||| |||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtcaatcaa 31823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 40019164 - 40019261
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| ||||||  |||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  40019164 catcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 40019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 4e-83; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 240 - 451
Target Start/End: Original strand, 41944576 - 41944785
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttttttgacgtc 41944675  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
     |  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  41944676 ga--aatttcgtccttccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccgcgtgtacagggactaaattgatgg 41944773  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  41944774 aaaatacgaaaa 41944785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 41944833 - 41945009
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||    
T  41944833 acccctatgttttccattaccataaatcctcacattttatacagaacacatcaactaagtccctgtctttttttcttccctccattttcacttctccaag 41944932  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||| ||||| |  |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  41944933 atcatcattctctctggtgatcaagcttgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 41945009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 279 - 363
Target Start/End: Original strand, 30501156 - 30501240
Alignment:
Q  279 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 363  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||   ||||| |||||||| ||||||||||||||    
T  30501156 ggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccctccgtccaa 30501240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 40963481 - 40963369
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    |||||| |||||||||||||||  | | || || ||||||||| |||||||| |||||||||| ||||||||||||||||||||   ||||| |||||||    
T  40963481 catcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtcaatcaatt 40963382  T
Q  348 tcgtccctccgtc 360  Q
    | |||||||||||    
T  40963381 tagtccctccgtc 40963369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 41946190 - 41946066
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    ||||||| ||||||||| || |||||||||  |  ||| || |||||| ||||| ||||| ||||||||||||||||||||| |||||||||   |||||    
T  41946190 gagtaaatcatcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatgtc 41946091  T
Q  340 catcaatttcgtccctccgtccaaa 364  Q
    | ||||||| |||||||||||||||    
T  41946090 cgtcaattttgtccctccgtccaaa 41946066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 44794270 - 44794341
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  44794270 cgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtccgtta 44794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 3152299 - 3152228
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| | ||||||||||||||||||||||||||    
T  3152299 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgtta 3152228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 332
Target Start/End: Complemental strand, 48635467 - 48635372
Alignment:
Q  237 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 332  Q
    ||||||| || ||||||||||||||||||||||| | |||| || ||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  48635467 atcgagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 48635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 345
Target Start/End: Original strand, 23774147 - 23774257
Alignment:
Q  235 agatcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttg 334  Q
    |||| |||| ||||||||| ||||||| |||||||| | |  | ||||||||||||||| |||||   |||||||||||  ||||||||||||||||  |    
T  23774147 agattgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcag 23774246  T
Q  335 atgtccatcaa 345  Q
    | |||||||||    
T  23774247 acgtccatcaa 23774257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 31887417 - 31887355
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 440  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| || ||||||| ||||||||    
T  31887417 tgctgtgttgtcttgtacacgtggcaaaaaggaagccatatgttcaaggactaatttgatgga 31887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 2226138 - 2226074
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  2226138 tgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgatggaaa 2226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 240 - 376
Target Start/End: Complemental strand, 40509035 - 40508899
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||| | || | ||||||||||||||| |||||   |||||||||||  || ||| |||||||||  || |||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtc 40508936  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagt 376  Q
    ||||||    ||||||||||||||  | |||||||||    
T  40508935 catcaaaaatgtccctccgtccaagtgttccgttagt 40508899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 2660275 - 2660346
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| |||||| |||||||    || ||||||||| ||||||||||||||||||||||| ||||    
T  2660275 cgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtctgtta 2660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 48633877 - 48634000
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||| | || | || |||||||||||  |||||   |||||||||||  ||||||||||||||||  || |||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 48633976  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  48633977 catcaaaaaggtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 7884856 - 7884795
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| ||||||||||| | ||||||||||||||||||    
T  7884856 tgtgttgtcttgtacacgtgtcaacaaggcagccacatgtataaggactaaattgatggaaa 7884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 23888735 - 23888678
Alignment:
Q  380 ctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||| ||||||| ||||| || ||||||||||||||| |||||||||| |||||    
T  23888735 ctgtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 23888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 45897058 - 45897155
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| ||||||| |||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  45897058 catcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 51454376 - 51454283
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    |||||| ||||||||| ||||||| |||||||| | |||| |||||||||| | || |||||   |||||||||||| |||||  |||||||||    
T  51454376 tcgagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 53190742 - 53190681
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  53190742 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 53190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 30599903 - 30599839
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  30599903 tgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 30599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 33113135 - 33113083
Alignment:
Q  389 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 441  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| |||||||||    
T  33113135 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgatggaa 33113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 363
Target Start/End: Complemental strand, 31887576 - 31887453
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||| | |||| || |||||||  ||  |||||   |||||||||||  ||||||||||||||||  ||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtc 31887477  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
     |||||    ||||||||||||||    
T  31887476 tatcaaaaaggtccctccgtccaa 31887453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 377
Target Start/End: Complemental strand, 53190893 - 53190766
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  |     
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  350 gtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||||||| ||||||||||    
T  53190793 gtccctccgtccaaaagctccgttagtg 53190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 35905692 - 35905634
Alignment:
Q  384 gttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  35905692 gttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 35905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 54898601 - 54898659
Alignment:
Q  384 gttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  54898601 gttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 54898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 17515472 - 17515533
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  17515472 tgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 17515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 23293152 - 23293091
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| | ||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  23293152 tgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 23293091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 23887206 - 23887303
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| ||||||| |||||||||| || | ||| || |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  23887206 catcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaatgtcaatcaa 23887303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 33111849 - 33111946
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||| | || | || ||||||| |||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  33111849 catcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 33111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 33113304 - 33113199
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| || |||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  |||||||| |||||||  || |||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtc 33113205  T
Q  340 catcaa 345  Q
    ||||||    
T  33113204 catcaa 33113199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 41977911 - 41977972
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  41977911 tgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 41977972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 48634051 - 48634099
Alignment:
Q  389 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| |||||    
T  48634051 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgat 48634099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 9e-78; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 240 - 451
Target Start/End: Complemental strand, 42620887 - 42620676
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| |||    
T  42620887 gagtcaaccatcaatttcatcccggaattttcaggggtcggccaaattcgtcccccaatttaaccaaatatcaaaatagtctctgaatttgtttgacgtc 42620788  T
Q  340 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 439  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  42620787 catcaatttcatccctccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtatagggactaaattgatgg 42620688  T
Q  440 aaaatgcgaaaa 451  Q
    ||||| ||||||    
T  42620687 aaaatacgaaaa 42620676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 42620628 - 42620452
Alignment:
Q  499 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  42620628 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatttgttcttcttccctccattttcacttctccaag 42620529  T
Q  599 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatc 675  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  42620528 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatc 42620452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 364
Target Start/End: Complemental strand, 1344897 - 1344781
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 347  Q
    ||||||||||||||||||||||  | | || || |||||| |||||||||||  |||||||||||||||||||| |||||||||   ||||| |||||||    
T  1344897 catcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaatt 1344798  T
Q  348 tcgtccctccgtccaaa 364  Q
    | |||||||||||||||    
T  1344797 tagtccctccgtccaaa 1344781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 38596868 - 38596973
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||||||| |||||||||| || | ||||||||||||||| |||||   |||||||||||  ||||||||||||||||| || |||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtc 38596967  T
Q  340 catcaa 345  Q
    ||||||    
T  38596968 catcaa 38596973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 32090008 - 32089911
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  32090008 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 32089911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 43318186 - 43318093
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 331  Q
    |||||| ||||||||| ||||||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||    
T  43318186 tcgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 17574476 - 17574540
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  17574476 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 17574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 1343264 - 1343345
Alignment:
Q  283 aaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 364  Q
    |||||||||||  |||| ||| ||||||||||||||||  |||||||||   || || |||||||| |||||||||||||||    
T  1343264 aaattcgtcccttaatttaacaaaatatcaaaatagtctttgaatttgtaaaatatcaatcaatttagtccctccgtccaaa 1343345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 7268004 - 7268065
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  7268004 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 7268065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 18726573 - 18726670
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || ||  |||| |||||||| |||||   |||||||||||  |||||||| ||||||||  ||||| |||||    
T  18726573 catcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaatgtcaatcaa 18726670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 33257843 - 33257746
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 345  Q
    |||||| |||||||||||||||||| || | |||||| ||||||||  ||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 33257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 38176647 - 38176724
Alignment:
Q  255 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 332  Q
    |||||||||||||||| | || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 38203871 - 38203948
Alignment:
Q  255 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 332  Q
    |||||||||||||||| | || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 40330598 - 40330514
Alignment:
Q  248 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 332  Q
    |||||| |||||||||||||||| | || | ||||||| ||||||| |||||   |||||||||||  || ||||||||||||||    
T  40330598 catcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40330514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 377
Target Start/End: Original strand, 17574328 - 17574455
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||| ||||||| |||||||| |   || |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  |     
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  350 gtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||||||| ||||||||||    
T  17574428 gtccctccgtccaaaagctccgttagtg 17574455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 18728567 - 18728508
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||||||||| || ||||||||||| |||  ||||||||| |||||    
T  18728567 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttaagggactaatttgat 18728508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 29621842 - 29621771
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  29621842 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 29621771  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 377
Target Start/End: Complemental strand, 30468394 - 30468267
Alignment:
Q  250 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 349  Q
    |||||||||||| |||||||| |   ||||| |||||||||| | |||||   ||||||||| |  |||||| |||||||    || |||||||||  |     
T  30468394 tcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatg 30468295  T
Q  350 gtccctccgtccaaaaggtccgttagtg 377  Q
    ||||||||||||||||| ||||||||||    
T  30468294 gtccctccgtccaaaagctccgttagtg 30468267  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 32087673 - 32087732
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||||||| ||||||| ||||| || ||||||||||| ||| |||||||||| |||||    
T  32087673 tgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 32087732  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 35395333 - 35395456
Alignment:
Q  240 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 339  Q
    |||| ||||||||| ||| |||||||||||| |    | |||||| |||||||| |||||   |||||||||||  |||| |||||||||||| || |||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  340 catcaatttcgtccctccgtccaa 363  Q
    ||||||    ||||||||||||||    
T  35395433 catcaaaaaggtccctccgtccaa 35395456  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 35395494 - 35395549
Alignment:
Q  382 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 437  Q
    |||||| ||||||| ||||| || ||||||||||||||| |||||||||| |||||    
T  35395494 gtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 35395549  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 42473668 - 42473597
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||||||||||||||||||    || ||||||||| |  |||| ||||||||||| ||||||||    
T  42473668 cgaaatatcaaaatagtccctgaattttacagacgtccatcaaatcagtccttccgtccaaaatgtccgtta 42473597  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 6116946 - 6116868
Alignment:
Q  282 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtc 360  Q
    |||||| |||||||||||   ||||||| | ||||||||| |||||||||   ||||| ||||||||||||||| ||||    
T  6116946 caaatttgtcccccaatttgtcgaaatagccaaatagtccttgaatttgtcaaatgtcaatcaatttcgtcccttcgtc 6116868  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 2854382 - 2854321
Alignment:
Q  309 atcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtcc 370  Q
    |||||| ||||||||||||||    || ||||| ||| ||||||||||||||||||||||||    
T  2854382 atcaaattagtccctgaattttacagacgtccaacaaattcgtccctccgtccaaaaggtcc 2854321  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 27349333 - 27349369
Alignment:
Q  406 aaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  27349333 aaggaagccacgtgtacaaggactaaattgatggaaa 27349369  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 329
Target Start/End: Original strand, 32835873 - 32835965
Alignment:
Q  237 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    ||||||| || |||||| |||||||||||||||| | || | || ||||||||||||  ||||   |||||||||||  || |||||||||||    
T  32835873 atcgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 345
Target Start/End: Original strand, 42619286 - 42619394
Alignment:
Q  237 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgat 336  Q
    ||||||| || |||||| |||||||||||||||| | || | || ||| |||||||| |||||   |||||||||||  || |||| |||||||||  ||    
T  42619286 atcgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaat 42619385  T
Q  337 gtccatcaa 345  Q
    ||| |||||    
T  42619386 gtcaatcaa 42619394  T

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Target: scaffold0058 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 3357 - 3428
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  3357 cgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgtta 3428  T

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Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 4529 - 4600
Alignment:
Q  303 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 374  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  4529 cgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgtta 4600  T

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Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 6760 - 6669
Alignment:
Q  238 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 329  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||| |||||    ||||||||||  || |||||||||||    
T  6760 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

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Target: scaffold1454 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 1421 - 1485
Alignment:
Q  378 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    |||||||||| ||||||||||||  || |||| | |||| |||||| ||||||||||||||||||    
T  1421 tgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggactaaattgatggaaa 1485  T

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Target: scaffold0564 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 8422 - 8483
Alignment:
Q  381 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 442  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| | ||||||||||||||||    
T  8422 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaagtactaaattgatggaaa 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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