View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15302_high_79 (Length: 249)
Name: NF15302_high_79
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15302_high_79 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 26565077 - 26565318
Alignment:
| Q |
1 |
gttgttgatggtggaattacttcctcaagaaattgtattggtttgtgaattactttcttagtattcattttctcttctgatttctttgtgacttattaat |
100 |
Q |
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| T |
26565077 |
gttgttgatggtggaattacttcctcaagaaattgtattggtttgtgaagtactttcttagtattcattttctcttctgatttctttgtgacttattaat |
26565176 |
T |
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| Q |
101 |
taattagttagtcttgttgttgattgatgaaaaaagttttatcccacttagt--gatgggctacatgatgtaaaactatgttaatgataatgannnnnnn |
198 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
26565177 |
taattagttagtcttgttgttgattgatgaacaaagttttatcccactaagtgggatgggctacatgatgtaaaactatgttaatgataatgattttttt |
26565276 |
T |
|
| Q |
199 |
gtcaataattcaatatagtttttgtaatatttgaagtattat |
240 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||| |
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| T |
26565277 |
gtgaataattcaatatagtttttgtaatatttgaagtgttat |
26565318 |
T |
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