View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15302_high_9 (Length: 635)

Name: NF15302_high_9
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15302_high_9
NF15302_high_9
[»] chr3 (15 HSPs)
chr3 (63-317)||(53747531-53747784)
chr3 (57-317)||(42773234-42773494)
chr3 (342-402)||(1093207-1093267)
chr3 (409-485)||(8503422-8503499)
chr3 (342-403)||(37915442-37915503)
chr3 (342-403)||(49308164-49308225)
chr3 (63-186)||(31328422-31328546)
chr3 (442-485)||(49544096-49544139)
chr3 (342-403)||(20111855-20111916)
chr3 (345-401)||(50704311-50704367)
chr3 (342-400)||(46889363-46889421)
chr3 (342-403)||(53467243-53467304)
chr3 (342-402)||(36863920-36863980)
chr3 (606-635)||(49102695-49102724)
chr3 (342-370)||(26250203-26250231)
[»] chr8 (4 HSPs)
chr8 (64-319)||(14184909-14185163)
chr8 (347-400)||(44495085-44495138)
chr8 (420-485)||(24260871-24260937)
chr8 (342-403)||(20105026-20105087)
[»] chr7 (11 HSPs)
chr7 (515-609)||(34938275-34938369)
chr7 (346-403)||(42745668-42745725)
chr7 (212-277)||(39263833-39263898)
chr7 (409-485)||(46148474-46148551)
chr7 (342-403)||(32577326-32577387)
chr7 (342-400)||(42418173-42418231)
chr7 (342-403)||(9146098-9146159)
chr7 (342-403)||(12294227-12294288)
chr7 (342-401)||(31077711-31077770)
chr7 (342-403)||(12293500-12293561)
chr7 (607-635)||(42584593-42584621)
[»] chr2 (11 HSPs)
chr2 (57-219)||(16950810-16950971)
chr2 (57-219)||(17021475-17021636)
chr2 (342-400)||(30266359-30266417)
chr2 (346-402)||(45632379-45632435)
chr2 (439-485)||(13598591-13598637)
chr2 (346-400)||(42847969-42848023)
chr2 (346-400)||(42848613-42848667)
chr2 (343-400)||(25616888-25616945)
chr2 (404-485)||(4897660-4897742)
chr2 (404-485)||(4945054-4945136)
chr2 (404-485)||(12296346-12296428)
[»] chr6 (5 HSPs)
chr6 (409-485)||(23282723-23282800)
chr6 (404-485)||(493597-493682)
chr6 (350-403)||(18970615-18970668)
chr6 (439-485)||(8646122-8646168)
chr6 (409-485)||(7847230-7847303)
[»] chr1 (5 HSPs)
chr1 (409-485)||(1427242-1427319)
chr1 (409-485)||(33336844-33336921)
chr1 (342-400)||(23732892-23732950)
chr1 (607-635)||(8462272-8462300)
chr1 (362-402)||(19534751-19534791)
[»] chr5 (7 HSPs)
chr5 (342-403)||(41609541-41609602)
chr5 (342-400)||(33573291-33573349)
chr5 (342-403)||(14098380-14098441)
chr5 (342-400)||(4427908-4427966)
chr5 (342-403)||(210404-210465)
chr5 (65-149)||(2687767-2687852)
chr5 (606-635)||(35189437-35189466)
[»] chr4 (8 HSPs)
chr4 (342-400)||(50185316-50185374)
chr4 (344-400)||(5941337-5941393)
chr4 (342-401)||(24844121-24844180)
chr4 (346-400)||(49648192-49648246)
chr4 (342-403)||(51702701-51702762)
chr4 (92-138)||(13058856-13058902)
chr4 (607-635)||(23237262-23237290)
chr4 (342-378)||(33114146-33114182)
[»] scaffold0136 (1 HSPs)
scaffold0136 (348-403)||(23689-23744)


Alignment Details
Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 63 - 317
Target Start/End: Original strand, 53747531 - 53747784
Alignment:
Q  63 caaaaatttattaaacccaaaactcatgcaagacgcaaagagtcggagtaat-aacaatacaaggatgccgcatataagcgtaacatcaaactccccaca 161  Q
    ||||| |||||| |||| |||||||||| |||||||||||||||||  |||| ||||||||||||||||||| |||| |||||||||| |||  || |||    
T  53747531 caaaattttattgaaccgaaaactcatgtaagacgcaaagagtcggtataatcaacaatacaaggatgccgcctataggcgtaacatccaacctccaaca 53747630  T
Q  162 ccattacggcaagggcacccaaaaataacaaacaaccaaagaaacatggtgtaagctatgactctgaaatctaattacaatcaccaaagttcaatcccat 261  Q
    ||| | |||| ||| |||| |||||   ||||| || ||| |||||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  53747631 ccaatccggcgaggacaccaaaaaac--caaactacaaaacaaacatggcgtaagctgtgactctgaaatctaattacaaacaccaaaattcaatcccat 53747728  T
Q  262 ggctatgcctcatccattccatacctgccccatgtaaacacacaacaccaacagcc 317  Q
     |||||||||||||||||||||| ||||||||||   ||||||  |||||||||||    
T  53747729 agctatgcctcatccattccataactgccccatggggacacaccgcaccaacagcc 53747784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 57 - 317
Target Start/End: Original strand, 42773234 - 42773494
Alignment:
Q  57 aatcgacaaaaatttattaaacccaaaactcatgcaagacgcaaagagtcggagtaat-aacaatacaaggatgccgcatataagcgtaacatcaaactc 155  Q
    ||||| ||||| |||||| |||| ||||||||||||||||||||||||||||  |||  |||||| |||||||||||| |||| |||||||| | |||      
T  42773234 aatcggcaaaattttattgaaccgaaaactcatgcaagacgcaaagagtcggtataaacaacaatccaaggatgccgcctataggcgtaacaaccaacct 42773333  T
Q  156 cccacaccattacggcaagggcacccaaaaataacaaacaaccaaagaaacatggt-gtaagctatgactctgaaatctaattacaatcaccaaagttca 254  Q
    || |||||| | |||| ||| |||| |||||   ||||| || ||| ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  42773334 ccaacaccaatccggcgaggacaccaaaaaac--caaactacaaaacaaacatggtcgtaagctatgactctgaaatctaattacaaacaccaaaattca 42773431  T
Q  255 atcccatggctatgcctcatccattccatacctgccccatgtaaacacacaacaccaacagcc 317  Q
    ||||||| |||||||||||||||| ||||| ||||||||||   ||||||  |||||||||||    
T  42773432 atcccatagctatgcctcatccataccataactgccccatggggacacaccgcaccaacagcc 42773494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 1093267 - 1093207
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatc 402  Q
    ||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  1093267 aagagcaataacatctgaaacgttgatttagatccaacggtctaaattaattcctctcatc 1093207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 8503499 - 8503422
Alignment:
Q  409 tttgtcttttattataagacc-ctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| ||||||||||||  ||||  || ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8503499 tttgtctcttattataagacttctttgttatttccaagcgcattaattaatttttcaccatcatacccctatttattt 8503422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 37915503 - 37915442
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||| |||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||    
T  37915503 aagaacaattaaatctgaagcgttgattttgatccaatggtctagattaattcctctcatcc 37915442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 49308225 - 49308164
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||||||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  49308225 aagagcaattaaatctgaagcgttgattttgatccaatgatccaaattaattcctctcatcc 49308164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 31328422 - 31328546
Alignment:
Q  63 caaaaatttattaaacccaaaactcatgcaagacgcaaagagtcgg-agtaataacaatacaaggatgccgcatataagcgtaacatcaaactccccaca 161  Q
    ||||| |||||| || | |||||||||||||||||||||||||||| |  || |||||||||||||||| || |||| |||||||| | |||  || |||    
T  31328422 caaaattttattgaaacgaaaactcatgcaagacgcaaagagtcggtataaacaacaatacaaggatgctgcctataggcgtaacaaccaacctccaaca 31328521  T
Q  162 ccattacggcaagggcacccaaaaa 186  Q
    ||| | |||||||| |||| |||||    
T  31328522 ccaatccggcaaggacaccaaaaaa 31328546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 49544139 - 49544096
Alignment:
Q  442 caagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  49544139 caagtgcattaattaatttttcaccatcatacccctatttattt 49544096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 20111855 - 20111916
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||| |||||||| |||||||| ||||||||||||||| |  |||||||||||||||||||    
T  20111855 aagagtaattaaatttgaagcgtcgatttagatccaacgatcaaaattaattcctctcatcc 20111916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 345 - 401
Target Start/End: Original strand, 50704311 - 50704367
Alignment:
Q  345 agcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcat 401  Q
    |||||||||||||||||||||||||| ||||||| |||  | |||||||||||||||    
T  50704311 agcaattaaatctgaagcgttgattttgatccaatggtccagattaattcctctcat 50704367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 46889421 - 46889363
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||| ||||||||||||| | |||||||| |||| |||||| |||||||||||||||||    
T  46889421 aagaacaattaaatctgaggtgttgattttgatctaacggtctaaattaattcctctca 46889363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 53467243 - 53467304
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||||||||||| |||||||||||||| ||||||| | |  | |||||||||||||||||    
T  53467243 aagagcaattaaatttgaagcgttgattttgatccaatgatccagattaattcctctcatcc 53467304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 36863980 - 36863920
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatc 402  Q
    ||||||| || |||||||  |||||||||||||||||| || ||||||||| |||||||||    
T  36863980 aagagcattttaatctgagccgttgatttagatccaacagtctaaattaatccctctcatc 36863920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 635
Target Start/End: Complemental strand, 49102724 - 49102695
Alignment:
Q  606 aatatactactccctccgtcccaaattgta 635  Q
    ||||||||||||||||||||||||||||||    
T  49102724 aatatactactccctccgtcccaaattgta 49102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 26250231 - 26250203
Alignment:
Q  342 aagagcaattaaatctgaagcgttgattt 370  Q
    |||||||||||||||||||||||||||||    
T  26250231 aagagcaattaaatctgaagcgttgattt 26250203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 64 - 319
Target Start/End: Original strand, 14184909 - 14185163
Alignment:
Q  64 aaaaatttattaaacccaaaactcatgcaagacgcaaagagtcggagtaat-aacaatacaaggatgccgcatataagcgtaacatcaaactccccacac 162  Q
    |||| ||||| ||||| ||||||||||||||||||||||||| ||  |||  |||||||||||||| |||| |||| |||||||||| |||  || ||||    
T  14184909 aaaattttataaaaccaaaaactcatgcaagacgcaaagagttggtataaacaacaatacaaggataccgcctataggcgtaacatccaacctccaacac 14185008  T
Q  163 cattacggcaagggcacccaaaaataacaaacaaccaaagaaacatggtgtaagctatgactctgaaatctaattacaatcaccaaagttcaatcccatg 262  Q
    || | |||| ||| |||| |||||   |||||||| ||| |||||||| |||||||||||||||| |||||||||| || ||||||| |||||||||||     
T  14185009 caatccggcgaggacaccaaaaaac--caaacaacaaaacaaacatggcgtaagctatgactctggaatctaattagaaacaccaaaattcaatcccatt 14185106  T
Q  263 gctatgcctcatccattccatacctgccccatgtaaacacacaacaccaacagcctc 319  Q
    |||||||||||||||||||||  |||||||| |   ||||||  |||||||||||||    
T  14185107 gctatgcctcatccattccatgactgccccaaggggacacaccgcaccaacagcctc 14185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 44495085 - 44495138
Alignment:
Q  347 caattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  44495085 caattaaatttgaagcgttgatttagatccaacggtctaaattaattcctctca 44495138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 24260937 - 24260871
Alignment:
Q  420 ttataaga-ccctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    |||||||| |||||| ||| |||||||||||||||||||||||| |||| || |||| |||||||||    
T  24260937 ttataagatccctttgatatttccaagtgcattaattaattttttaccaacatacccttatttattt 24260871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 20105026 - 20105087
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||| |||||||||||||||||||||||| ||||||| | |  | |||||||||||||||||    
T  20105026 aagaccaattaaatctgaagcgttgattttgatccaatgattcagattaattcctctcatcc 20105087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 5e-39; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 34938275 - 34938369
Alignment:
Q  515 gtcaagattcttatacaaaacttttaattggaggtgactcattttcttttcttatagtaattgcttccgacatctttgaccaaaacagataaata 609  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34938275 gtcaatatttttatacaaaacttttaattggaggtgactcattttcttttcttatagtaattgcttccgacatctttgaccaaagcagataaata 34938369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 42745725 - 42745668
Alignment:
Q  346 gcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  42745725 gcaattaaatctgaagcgttgatttagatccaacggtccaaattaattcctctcatcc 42745668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 39263833 - 39263898
Alignment:
Q  212 gtaagctatgactctgaaatctaattacaatcaccaaagttcaatcccatggctatgcctcatcca 277  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||| ||||    
T  39263833 gtaagctatgactatgaaatcaaattacaatcaccaaaattcaatcccatagctatgcctcttcca 39263898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 46148474 - 46148551
Alignment:
Q  409 tttgtcttttattataagaccc-tttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  46148474 tttgtctcttattataagacccctttgttatttccaagtgcattaattaatttttcatcatcatacccctatttattt 46148551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 32577326 - 32577387
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||||||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||    
T  32577326 aagagcaattaaatctgaagcgttgattttgatccaatggttcagattaattcctctcatcc 32577387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 42418173 - 42418231
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||| ||||||||||||| |||||||||| |||| |||||| |||||||||||||||||    
T  42418173 aagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctca 42418231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 9146159 - 9146098
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||| |||||||||||||||||||||||| |||||||  ||  |||||||||||||||||||    
T  9146159 aagaacaattaaatctgaagcgttgattttgatccaaatgtccaaattaattcctctcatcc 9146098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 12294227 - 12294288
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||||||||||| |||||||||||||| ||||||| |||  | |||||||| ||||||||    
T  12294227 aagagcaattaaatatgaagcgttgattttgatccaatggttcagattaattcatctcatcc 12294288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 31077711 - 31077770
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcat 401  Q
    |||| ||||||| ||| | |||||||||| |||| |||||| ||||||||||||||||||    
T  31077711 aagaacaattaactctaaggcgttgattttgatctaacggtctaaattaattcctctcat 31077770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 12293561 - 12293500
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||| |||||||||||||||||||||||| ||||||| | |  | ||||||| |||||||||    
T  12293561 aagaccaattaaatctgaagcgttgattttgatccaatgatccagattaatttctctcatcc 12293500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 607 - 635
Target Start/End: Complemental strand, 42584621 - 42584593
Alignment:
Q  607 atatactactccctccgtcccaaattgta 635  Q
    |||||||||||||||||||||||||||||    
T  42584621 atatactactccctccgtcccaaattgta 42584593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 16950810 - 16950971
Alignment:
Q  57 aatcgacaaaaatttattaaacccaaaactcatgcaagacgcaaagagtcgg-agtaataacaatacaaggatgccgcatataagcgtaacatcaaactc 155  Q
    ||||| ||||| |||||| |||| |||||||||||||||||||||||||||| |  || ||||||||||||||||||| |||| |||||||| | |||      
T  16950810 aatcggcaaaattttattgaaccgaaaactcatgcaagacgcaaagagtcggtataaacaacaatacaaggatgccgcctataggcgtaacaaccaacct 16950909  T
Q  156 cccacaccattacggcaagggcacccaaaaataacaaacaaccaaagaaacatggtgtaagcta 219  Q
    || |||||| | |||||||| ||||  |||| | ||||| || ||| |||||||| ||||||||    
T  16950910 ccaacaccaatccggcaaggacacc--aaaaaaccaaactacaaaacaaacatggcgtaagcta 16950971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 17021475 - 17021636
Alignment:
Q  57 aatcgacaaaaatttattaaacccaaaactcatgcaagacgcaaagagtcgg-agtaataacaatacaaggatgccgcatataagcgtaacatcaaactc 155  Q
    ||||| ||||| |||||| |||| |||||||||||||||||||||||||||| |  || ||||||||||||||||||| |||| |||||||| | |||      
T  17021475 aatcggcaaaattttattgaaccgaaaactcatgcaagacgcaaagagtcggtataaacaacaatacaaggatgccgcctataggcgtaacaaccaacct 17021574  T
Q  156 cccacaccattacggcaagggcacccaaaaataacaaacaaccaaagaaacatggtgtaagcta 219  Q
    || |||||| | |||||||| ||||  |||| | ||||| || ||| |||||||| ||||||||    
T  17021575 ccaacaccaatccggcaaggacacc--aaaaaaccaaactacaaaacaaacatggcgtaagcta 17021636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 30266417 - 30266359
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  30266417 aagagcaattaaatctgaagtgttgatttagatccaacggtctaaattaattcctctca 30266359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 45632379 - 45632435
Alignment:
Q  346 gcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatc 402  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  45632379 gcaattaaatctaaagcgttgatttagatccaacggtttaaattaattcctctcatc 45632435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 439 - 485
Target Start/End: Original strand, 13598591 - 13598637
Alignment:
Q  439 ttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  13598591 ttccaagtgcattaattaatttttcaccatcatacccctatttattt 13598637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 42848023 - 42847969
Alignment:
Q  346 gcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    ||||||||||||||||||||||||||||||||| |||  ||| ||||||||||||    
T  42848023 gcaattaaatctgaagcgttgatttagatccaatggtccaaactaattcctctca 42847969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 42848613 - 42848667
Alignment:
Q  346 gcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  42848613 gcaattaaatctgaagcgttgatttagattcaacggtccaaattaattcttctca 42848667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 25616945 - 25616888
Alignment:
Q  343 agagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||||||||||||||||||| |||||||| |||||||||| ||| |||||| ||||||    
T  25616945 agagcaattaaatctgaagccttgatttaaatccaacggtctaagttaatttctctca 25616888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 4897742 - 4897660
Alignment:
Q  404 aaaaatttgtcttttattataagacc-ctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||| |||||| || |||||||||| |||| ||| ||| |||| |||||||||||| || |||| || ||||||||||||||    
T  4897742 aaaaaattgtctctttttataagacctctttgatatttcgaagtacattaattaattctttaccaacatacccctatttattt 4897660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 4945136 - 4945054
Alignment:
Q  404 aaaaatttgtcttttattataagacc-ctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||| |||||| || |||||||||| |||| ||| ||| |||| |||||||||||| || |||| || ||||||||||||||    
T  4945136 aaaaaattgtctctttttataagacctctttgatatttcgaagtacattaattaattctttaccaacatacccctatttattt 4945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 12296428 - 12296346
Alignment:
Q  404 aaaaatttgtcttttattataagacc-ctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||| |||||| || |||||||||  |||| ||| |||||||| |||||||||||| || |||| || ||||||||||||||    
T  12296428 aaaaaattgtctctttttataagacatctttgatatttccaagtacattaattaattctttaccaacatacccctatttattt 12296346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 23282800 - 23282723
Alignment:
Q  409 tttgtcttttattataagaccc-tttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23282800 tttgtctcttattataagacccctttgttatttccaagtgcattaattaatttttcaccatcatacccctatttattt 23282723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 493682 - 493597
Alignment:
Q  404 aaaaatttgtcttttattataaga----ccctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    |||||||||||| ||||||||| |    ||||||  || |||||||||||||||||||||||||||||||| |||||| |||||||    
T  493682 aaaaatttgtctcttattataataagacccctttgttacttccaagtgcattaattaatttttcaccatcatacccctgtttattt 493597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 403
Target Start/End: Original strand, 18970615 - 18970668
Alignment:
Q  350 ttaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||| |||||||| ||||||||||||||| |  |||||||||||||||||||    
T  18970615 ttaaatttgaagcgtcgatttagatccaacgatcaaaattaattcctctcatcc 18970668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 485
Target Start/End: Complemental strand, 8646168 - 8646122
Alignment:
Q  439 ttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    |||||||| ||||||||||||||| |||| || ||||||||||||||    
T  8646168 ttccaagtacattaattaattttttaccaccatacccctatttattt 8646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 485
Target Start/End: Complemental strand, 7847303 - 7847230
Alignment:
Q  409 tttgtcttttattataagaccc-tttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| ||||||||| |||| |||  || |||||||||||||    ||||||||||||||| ||||||||||||||    
T  7847303 tttgtctcttattataatacccctttgttatttccaagtgcatt----aatttttcaccatcatacccctatttattt 7847230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 1427242 - 1427319
Alignment:
Q  409 tttgtcttttattataagaccc-tttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  1427242 tttgtctcttattataagacccctttgttatttccaagtgcattaattaatttttcaccatcatacccctatttattt 1427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 33336844 - 33336921
Alignment:
Q  409 tttgtcttttattataagacc-ctttaatagttccaagtgcattaattaatttttcaccatcaaacccctatttattt 485  Q
    ||||||| ||||||||||||| ||||  || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33336844 tttgtctcttattataagacctctttgttatttccaagtgcattaattaatttttcaccatcatacccctatttattt 33336921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 23732892 - 23732950
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  23732892 aagaacaattaaatctgaagtgttgatttagatctaacggtctaaattaattcctctca 23732950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 607 - 635
Target Start/End: Original strand, 8462272 - 8462300
Alignment:
Q  607 atatactactccctccgtcccaaattgta 635  Q
    |||||||||||||||||||||||||||||    
T  8462272 atatactactccctccgtcccaaattgta 8462300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 19534751 - 19534791
Alignment:
Q  362 cgttgatttagatccaacggtgtaaattaattcctctcatc 402  Q
    |||||||||||||||||| || ||||||||| |||||||||    
T  19534751 cgttgatttagatccaacagtctaaattaatccctctcatc 19534791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 41609602 - 41609541
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||||||||||||||| |||||||||| ||||||| |||  |||||||||||||||||||    
T  41609602 aagagcaattaaatctgatgcgttgattttgatccaatggttcaaattaattcctctcatcc 41609541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 33573349 - 33573291
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||| ||||||||||||| |||||||||| |||| |||||| |||||||||||||||||    
T  33573349 aagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctca 33573291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 14098380 - 14098441
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||||||||||||||||||||||||||| | ||||| |||  |||||||||||| ||||||    
T  14098380 aagagcaattaaatctgaagcgttgattttgttccaatggtccaaattaattcctgtcatcc 14098441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 4427966 - 4427908
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||||||||||||| | ||| || ||||||||| ||||||| |||||||||||||||||    
T  4427966 aagagcaattaaatttaaagtgtcgatttagattcaacggtctaaattaattcctctca 4427908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 210404 - 210465
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    |||||||||||||||| |||||||||||| ||||||| |||  | |||||||||| ||||||    
T  210404 aagagcaattaaatctaaagcgttgattttgatccaatggtccagattaattcctttcatcc 210465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 2687767 - 2687852
Alignment:
Q  65 aaaatttattaaacccaaaactcatgcaagacgcaaagagtcggagtaataa-caatacaaggatgccgcatataagcgtaacatc 149  Q
    ||||||||||||  || |||||| | |||||||||||||| ||||  || || |||||||| ||||||| ||||| ||||||||||    
T  2687767 aaaatttattaagaccgaaactcttacaagacgcaaagagacggaaaaaaaagcaatacaaagatgccgtatataggcgtaacatc 2687852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 635
Target Start/End: Complemental strand, 35189466 - 35189437
Alignment:
Q  606 aatatactactccctccgtcccaaattgta 635  Q
    ||||||||||||||||||||||||||||||    
T  35189466 aatatactactccctccgtcccaaattgta 35189437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 50185374 - 50185316
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||| ||||||||||||| |||||||||| |||| |||||| |||||||||||||||||    
T  50185374 aagaacaattaaatctgaggcgttgattttgatctaacggtctaaattaattcctctca 50185316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 5941337 - 5941393
Alignment:
Q  344 gagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    ||||||||| |||||||||||||||||||||| ||| || || ||||||||||||||    
T  5941337 gagcaattatatctgaagcgttgatttagatctaactgtctatattaattcctctca 5941393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 24844180 - 24844121
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcat 401  Q
    ||||||||||||||||||||||||||||| ||||||| |||  | ||||||| |||||||    
T  24844180 aagagcaattaaatctgaagcgttgattttgatccaatggttcagattaatttctctcat 24844121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 49648192 - 49648246
Alignment:
Q  346 gcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctca 400  Q
    |||||||||||||||||||||||||||||  || |||  ||||||||||||||||    
T  49648192 gcaattaaatctgaagcgttgatttagattaaatggtccaaattaattcctctca 49648246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 51702762 - 51702701
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||||||||||||||||| ||||||||| ||||||| | |  | |||||||||||||||||    
T  51702762 aagagcaattaaatctgaaacgttgattttgatccaatgatccagattaattcctctcatcc 51702701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 13058902 - 13058856
Alignment:
Q  92 aagacgcaaagagtcggagtaataacaatacaaggatgccgcatata 138  Q
    ||||||||||||| ||||| || || |||||||||||||||||||||    
T  13058902 aagacgcaaagaggcggagaaaaaagaatacaaggatgccgcatata 13058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 607 - 635
Target Start/End: Complemental strand, 23237290 - 23237262
Alignment:
Q  607 atatactactccctccgtcccaaattgta 635  Q
    |||||||||||||||||||||||||||||    
T  23237290 atatactactccctccgtcccaaattgta 23237262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 33114182 - 33114146
Alignment:
Q  342 aagagcaattaaatctgaagcgttgatttagatccaa 378  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  33114182 aagagtaattaaatctgaagcgttgattttgatccaa 33114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 23689 - 23744
Alignment:
Q  348 aattaaatctgaagcgttgatttagatccaacggtgtaaattaattcctctcatcc 403  Q
    ||||||||||||||||||||||| ||||||| | | || |||||||||||||||||    
T  23689 aattaaatctgaagcgttgattttgatccaatgatctatattaattcctctcatcc 23744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University