View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15302_high_92 (Length: 237)

Name: NF15302_high_92
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15302_high_92
NF15302_high_92
[»] chr6 (9 HSPs)
chr6 (1-221)||(30890629-30890849)
chr6 (1-156)||(11972291-11972446)
chr6 (1-156)||(23149383-23149538)
chr6 (1-156)||(23155045-23155200)
chr6 (1-151)||(10197344-10197494)
chr6 (38-151)||(4212836-4212948)
chr6 (1-51)||(31185841-31185892)
chr6 (38-137)||(12577500-12577598)
chr6 (80-151)||(24202457-24202528)
[»] chr5 (13 HSPs)
chr5 (1-156)||(37379833-37379988)
chr5 (1-156)||(2254417-2254572)
chr5 (1-156)||(30322259-30322414)
chr5 (5-156)||(27890167-27890318)
chr5 (1-156)||(37265854-37266009)
chr5 (1-156)||(8424688-8424842)
chr5 (38-137)||(3700721-3700819)
chr5 (38-137)||(3868331-3868429)
chr5 (38-137)||(10031825-10031923)
chr5 (38-137)||(24622809-24622907)
chr5 (75-119)||(3696139-3696183)
chr5 (75-119)||(3698501-3698545)
chr5 (75-119)||(3870605-3870649)
[»] chr4 (13 HSPs)
chr4 (1-156)||(611041-611196)
chr4 (1-156)||(6253983-6254138)
chr4 (1-156)||(35863839-35863994)
chr4 (1-156)||(13236190-13236346)
chr4 (1-156)||(1864838-1864993)
chr4 (1-156)||(37523640-37523795)
chr4 (1-156)||(49780049-49780205)
chr4 (1-128)||(37519424-37519551)
chr4 (32-151)||(14288269-14288388)
chr4 (37-153)||(31928069-31928185)
chr4 (38-137)||(55550069-55550167)
chr4 (38-137)||(49716515-49716613)
chr4 (104-136)||(49713991-49714023)
[»] chr1 (10 HSPs)
chr1 (1-156)||(48770675-48770830)
chr1 (1-156)||(27346899-27347054)
chr1 (1-156)||(37384125-37384280)
chr1 (1-156)||(6300576-6300731)
chr1 (1-151)||(24493778-24493928)
chr1 (12-156)||(2349307-2349460)
chr1 (37-153)||(16048252-16048368)
chr1 (38-137)||(52507960-52508058)
chr1 (81-151)||(16650210-16650280)
chr1 (104-136)||(16652827-16652859)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-156)||(14250-14405)
[»] chr7 (5 HSPs)
chr7 (1-156)||(12730611-12730766)
chr7 (1-156)||(12773193-12773348)
chr7 (19-156)||(12681887-12682024)
chr7 (38-137)||(42239714-42239812)
chr7 (38-137)||(46053373-46053471)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-156)||(41227-41382)
[»] chr8 (15 HSPs)
chr8 (1-156)||(25200614-25200769)
chr8 (1-154)||(30333884-30334037)
chr8 (1-156)||(7782570-7782726)
chr8 (1-156)||(7831844-7832000)
chr8 (1-156)||(18665823-18665978)
chr8 (37-153)||(4971109-4971225)
chr8 (37-153)||(14105128-14105244)
chr8 (2-114)||(23102992-23103104)
chr8 (37-153)||(33854887-33855003)
chr8 (38-122)||(19194064-19194148)
chr8 (38-151)||(14787172-14787284)
chr8 (38-137)||(14787409-14787507)
chr8 (38-137)||(14787632-14787730)
chr8 (38-137)||(14787855-14787953)
chr8 (39-137)||(14788301-14788398)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-156)||(28980-29135)
scaffold0131 (119-156)||(39837-39874)
[»] chr2 (12 HSPs)
chr2 (1-156)||(37818190-37818345)
chr2 (1-156)||(39435895-39436050)
chr2 (3-156)||(41912456-41912609)
chr2 (1-156)||(28659357-28659512)
chr2 (1-151)||(33351531-33351681)
chr2 (2-137)||(11042287-11042422)
chr2 (80-153)||(3564746-3564819)
chr2 (38-137)||(2870743-2870841)
chr2 (38-137)||(26913007-26913105)
chr2 (38-151)||(3650363-3650475)
chr2 (38-151)||(24255560-24255672)
chr2 (37-137)||(21418660-21418759)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-156)||(8499-8656)
[»] chr3 (9 HSPs)
chr3 (1-156)||(42993-43148)
chr3 (1-151)||(10118390-10118540)
chr3 (31-151)||(10017981-10018101)
chr3 (1-151)||(10255438-10255588)
chr3 (37-153)||(41756869-41756985)
chr3 (38-156)||(37797345-37797462)
chr3 (38-137)||(27276191-27276289)
chr3 (38-122)||(58089-58173)
chr3 (38-151)||(15321424-15321536)
[»] scaffold0073 (3 HSPs)
scaffold0073 (11-151)||(48294-48434)
scaffold0073 (11-151)||(48549-48689)
scaffold0073 (11-151)||(53080-53220)
[»] scaffold0356 (1 HSPs)
scaffold0356 (37-153)||(2561-2677)
[»] scaffold0276 (1 HSPs)
scaffold0276 (37-147)||(4-114)
[»] scaffold0050 (1 HSPs)
scaffold0050 (5-122)||(12129-12245)
[»] scaffold0029 (1 HSPs)
scaffold0029 (37-137)||(102998-103097)
[»] scaffold0770 (1 HSPs)
scaffold0770 (38-137)||(4700-4798)
[»] scaffold0118 (1 HSPs)
scaffold0118 (38-137)||(19157-19257)
[»] scaffold0003 (2 HSPs)
scaffold0003 (75-119)||(188973-189017)
scaffold0003 (75-119)||(182019-182063)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30890849 - 30890629
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||  |||||||||||||| ||||||    
T  30890849 attactgttgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgttctcaccacaatcattctcaca 30890750  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctattaaaaattgaaataactaaaagggaatattctatagttttgtatac 200  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30890749 tatttgtatttaatgttcttgtataaaaggaaattttacaatatcaaattctattaaaaattgaaatgactaaaagggaatattctatagttttgtatac 30890650  T
Q  201 actcttattcaaatatcaatt 221  Q
    | |||||||||||||||||||    
T  30890649 attcttattcaaatatcaatt 30890629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11972291 - 11972446
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  11972291 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 11972390  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11972391 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 11972446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23149383 - 23149538
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  23149383 attattattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcttcaca 23149482  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23149483 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 23149538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23155045 - 23155200
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  23155045 attattattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcttcaca 23155144  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23155145 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 23155200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10197494 - 10197344
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||| ||||| ||| ||||||||| |    
T  10197494 attactattgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgctctcacaacattcatcctcaaa 10197395  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
     |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  10197394 aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 10197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 4212836 - 4212948
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  4212836 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 4212934  T
Q  138 acaatatcaaattc 151  Q
     |||  ||||||||    
T  4212935 tcaaattcaaattc 4212948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31185892 - 31185841
Alignment:
Q  1 attactattgttttggtgttgccacatg-cccctttcttttttacaaatgct 51  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31185892 attactattgttttggtattgccacatgtcccctttcttttttacaaatgct 31185841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 12577500 - 12577598
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||| ||| |||||||||||||| | ||| |||||||||||||||    
T  12577500 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctaacaaatttgtatttaatgcttatgaataaaaggaagtttt 12577598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 24202528 - 24202457
Alignment:
Q  80 ctcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
    ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  24202528 ctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 24202457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37379988 - 37379833
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  37379988 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 37379889  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37379888 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 37379833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2254417 - 2254572
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  2254417 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 2254516  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2254517 tatttgtatttaatgttcatgtataaaatgaagttttacaatatcaaattctatta 2254572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30322414 - 30322259
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||||||||||| |||    
T  30322414 attactattgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgctctcaccacaatcatccttaca 30322315  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30322314 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 30322259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 27890318 - 27890167
Alignment:
Q  5 ctattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatt 104  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  27890318 ctattgttttggtgttgccacatatccctttcttttttacaaatgctctcaccatattgatcctaacaaaatgctctcaccacaatcatcctcacatatt 27890219  T
Q  105 tgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27890218 tgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 27890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37266009 - 37265854
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||    
T  37266009 attactattcttttggtgttgccacatgtccatttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcagcacaatcatcctcaca 37265910  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37265909 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 37265854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8424688 - 8424842
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||| | |||||||||||||||||||||    
T  8424688 attactattgttttggtgttgccacatgtccctttctttt-tacaaatgctctcaccatattgatcctcacaaaatactctcaccacaatcatcctcaca 8424786  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8424787 tatttgtatttaatgttcatgtataaaaggaacttttacaatatcaaattctatta 8424842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 3700819 - 3700721
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  3700819 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 3700721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 3868331 - 3868429
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  3868331 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 3868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 10031923 - 10031825
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||| ||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  10031923 tttttacaaatactctcaccacattcatcctcacaaa-tactctcactacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 10031825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 24622809 - 24622907
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| || ||||||||||| | ||| |||||||||||||||    
T  24622809 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatctgtatttaatgcttatgaataaaaggaagtttt 24622907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 3696183 - 3696139
Alignment:
Q  75 atgcactcaccacaatcatcctcacatatttgtatttaatgttca 119  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  3696183 atgctctcaccataatcatcctcacaaatttgtatttaatgttca 3696139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 3698545 - 3698501
Alignment:
Q  75 atgcactcaccacaatcatcctcacatatttgtatttaatgttca 119  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  3698545 atgctctcaccataatcatcctcacaaatttgtatttaatgttca 3698501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 3870605 - 3870649
Alignment:
Q  75 atgcactcaccacaatcatcctcacatatttgtatttaatgttca 119  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  3870605 atgctctcaccataatcatcctcacaaatttgtatttaatgttca 3870649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 611041 - 611196
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  611041 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 611140  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  611141 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 611196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6254138 - 6253983
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  6254138 attactattgttttggtgttgccacatgtcactttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcatcaca 6254039  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6254038 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 6253983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35863994 - 35863839
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  35863994 attactattgttttggtgttgccacatgtccctttctttttcacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 35863895  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35863894 tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta 35863839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13236190 - 13236346
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttc-ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac 99  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13236190 attactattgttttggtgttgccacatgtccctttcattttttacaaatgctctcaccatattgatcctcacaacatgctctcaccacaatcatcctcac 13236289  T
Q  100 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13236290 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 13236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1864993 - 1864838
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||||||    
T  1864993 attattattgttttggtgttgtcacatgtccctttcttttttacaaatgctctcaccatattgatcttcacaaaatgctctcaccacaatcatcctcaca 1864894  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1864893 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 1864838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37523640 - 37523795
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||    
T  37523640 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatccttacaaaatgctctcaccacaatcatcctcaca 37523739  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  37523740 tatttgtatttaatgttcatgtataaaatgaagttttacaatattaaattctatta 37523795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49780049 - 49780205
Alignment:
Q  1 attactattgtttt-ggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac 99  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||||| | |||||||||||||||||||| |  |||||||||||||||||||    
T  49780049 attactattgtttttggtgttgccacatatccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactttcaccacaatcatcctcac 49780148  T
Q  100 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49780149 atatttgtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta 49780205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 37519424 - 37519551
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||    
T  37519424 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatccttacaaaatgctctcaccacaatcatcctcaca 37519523  T
Q  101 tatttgtatttaatgttcatgtataaaa 128  Q
    ||||||||||||||||||||||||||||    
T  37519524 tatttgtatttaatgttcatgtataaaa 37519551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 14288269 - 14288388
Alignment:
Q  32 ctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaagga 131  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||| ||||||||| |||||||||||  ||| ||||||||||| ||| |||||||||    
T  14288269 ctttctttttaacaaatactctcaccatattgatcctcacaaaatgctctcaccacattcatcctcacaagtttctatttaatgtttatgaataaaagga 14288368  T
Q  132 agttttacaatatcaaattc 151  Q
    |||||| |||  ||||||||    
T  14288369 agtttttcaaattcaaattc 14288388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 31928185 - 31928069
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| ||||||||||| || |||||||||||||||    
T  31928185 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttatatttaatgtttatatataaaaggaagttt 31928086  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  31928085 tacaatttcaatttcta 31928069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 55550069 - 55550167
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  55550069 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 55550167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 49716613 - 49716515
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| ||||   || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  49716613 tttttacaaatactctcgccacattcatcctcacaaa-tactctcaccacattcaccctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 49716515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 49714023 - 49713991
Alignment:
Q  104 ttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||| ||||||||||||||||||||||    
T  49714023 ttgtatttaaagttcatgtataaaaggaagttt 49713991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 48770675 - 48770830
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  48770675 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 48770774  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48770775 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 48770830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27347054 - 27346899
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||    
T  27347054 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcactacaatcatcctcaca 27346955  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27346954 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 27346899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37384125 - 37384280
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  37384125 attactattgttttggtgttgccacatgtccctttctttttcacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 37384224  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37384225 tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta 37384280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6300576 - 6300731
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||    
T  6300576 attattattattttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcactacaatcatcctcaca 6300675  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6300676 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 6300731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24493778 - 24493928
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||| | ||||||||| |||||||||||    
T  24493778 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgttcctcacaaaatactctcaccacattcatcctcaca 24493877  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
     |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  24493878 aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 24493928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 2349460 - 2349307
Alignment:
Q  12 tttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat---------a 102  Q
    |||||||||  |||||| |||||||||||||||||||||||| | | ||||||||||||||||| ||  |||||||||| ||||||||||         |    
T  2349460 tttggtgttttcacatgtccctttcttttttacaaatgctctcaccttattgatcctcacaaaacgctttcaccacaattatcctcacatatttccgata 2349361  T
Q  103 tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2349360 tttgtatttaatgttcatgtataaaaagaagttttacaatatcaaattctatta 2349307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 16048368 - 16048252
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || || ||||||||||||    
T  16048368 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatacaaaaggaagttt 16048269  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  16048268 tacaatttcaatttcta 16048252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 52508058 - 52507960
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| || ||||||||||| | ||| |||||||||||||||    
T  52508058 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatctgtatttaatgcttatgaataaaaggaagtttt 52507960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16650210 - 16650280
Alignment:
Q  81 tcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
    |||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  16650210 tcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 16650280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 16652827 - 16652859
Alignment:
Q  104 ttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||| ||||||||||||||||||||||    
T  16652827 ttgtatttaaagttcatgtataaaaggaagttt 16652859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14250 - 14405
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  14250 attactattgttttggtgttgctacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 14349  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14350 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 14405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12730766 - 12730611
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||    
T  12730766 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccagaatcatcctcaca 12730667  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12730666 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 12730611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12773193 - 12773348
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||||||||||    
T  12773193 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatactcataaaatgctctcaccacaatcatcctcaca 12773292  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12773293 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 12773348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 12682024 - 12681887
Alignment:
Q  19 ttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttc 118  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12682024 ttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccagaatcatcctcacatatttgtatttaatgttc 12681925  T
Q  119 atgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12681924 atgtataaaaggaagttttacaatatcaaattctatta 12681887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 42239812 - 42239714
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  42239812 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 42239714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 46053471 - 46053373
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  46053471 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 46053373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41227 - 41382
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||||| | |||||||||||||||||||||    
T  41227 attactattgttttggtgttgccacatgtccctttctttattacaaatgctctcaccatattgatcctcacaaaatactctcaccacaatcatcctcaca 41326  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41327 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 41382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25200614 - 25200769
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  25200614 attactattgttttggtgttgccacatgtctctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcatcaca 25200713  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25200714 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 25200769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30334037 - 30333884
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  30334037 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 30333938  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctat 154  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  30333937 tatttgtatttaatgttcatgtataaaaggaaattctacaatatcaaattctat 30333884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7782726 - 7782570
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttctttttt-acaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac 99  Q
    ||||||||||||||||| |||||||||| |||||| |||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  7782726 attactattgttttggtcttgccacatgtccctttttttttttacaaatgctctcaccatattgatcctcacaaaatgccctcaccacaatcatcctcac 7782627  T
Q  100 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7782626 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattatatta 7782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7832000 - 7831844
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttctttttt-acaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac 99  Q
    ||||||||||||||||| |||||||||| |||||| |||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  7832000 attactattgttttggtcttgccacatgtccctttttttttttacaaatgctctcaccatattgatcctcacaaaatgccctcaccacaatcatcctcac 7831901  T
Q  100 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7831900 atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattatatta 7831844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18665978 - 18665823
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||| ||  ||||||||| | |||||||||||||||||||||    
T  18665978 attactattgttttggtggtgccacatgtccctttcttttttacaaatgctctcaccatattaataatcacaaaatactctcaccacaatcatcctcaca 18665879  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18665878 tatttgtatttaatgttcatgtataaaaggaagttttacgatatcaaattctatta 18665823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 4971225 - 4971109
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  4971225 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttaatgtttatgtataaaaggaagttt 4971126  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  4971125 tacaatttcaatttcta 4971109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 14105128 - 14105244
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || |||||||||||||||    
T  14105128 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatataaaaggaagttt 14105227  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  14105228 tacaatttcaatttcta 14105244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23102992 - 23103104
Alignment:
Q  2 ttactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat 101  Q
    |||||||| ||||||||||| ||  || |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||| |||     
T  23102992 ttactattcttttggtgttgtcatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacattcatccttacaa 23103091  T
Q  102 atttgtatttaat 114  Q
     ||| ||||||||    
T  23103092 gtttctatttaat 23103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 33854887 - 33855003
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || |||||||||||||||    
T  33854887 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt 33854986  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  33854987 tacaatttcaatttcta 33855003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 19194064 - 19194148
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgt 122  Q
    ||||||||||| || | |  ||||| | ||||||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  19194064 tttttacaaatactattacaatattcaccctcacaaaatgctctgaccacaatcatcctcataaatttgtatttaatgttcatgt 19194148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 14787284 - 14787172
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||||| |||||||||||||| | ||| |||||||||||||||    
T  14787284 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcacaaatttgtatttaatgcttatgaataaaaggaagtttt 14787186  T
Q  138 acaatatcaaattc 151  Q
     |||  ||||||||    
T  14787185 tcaaattcaaattc 14787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787507 - 14787409
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| |||||||||||||||    
T  14787507 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt 14787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787730 - 14787632
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| |||||||||||||||    
T  14787730 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt 14787632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787953 - 14787855
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| |||||||||||||||    
T  14787953 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt 14787855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 14788398 - 14788301
Alignment:
Q  39 ttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    |||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| |||||||||||||||    
T  14788398 ttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt 14788301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29135 - 28980
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||||||| |||| || ||||||||||||||||||    
T  29135 attactattgttttggtgttgccacatgtccctttcttttttacaaatgatctcaccatattgatcctcacaacatgctctaaccacaatcatcctcaca 29036  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29035 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 28980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 39837 - 39874
Alignment:
Q  119 atgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||| |||||||||||    
T  39837 atgtataaaaggaagttttacaatattaaattctatta 39874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37818190 - 37818345
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||| | |||||||||||||||||||||    
T  37818190 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgattctcacaaaatactctcaccacaatcatcctcaca 37818289  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37818290 tatttgtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta 37818345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39435895 - 39436050
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||| |||| |    
T  39435895 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccaccatcattctcata 39435994  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39435995 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 39436050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 41912456 - 41912609
Alignment:
Q  3 tactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacata 102  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| || ||||||||| | |||||||||||||||||||||||    
T  41912456 tactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgttcatcacaaaatactctcaccacaatcatcctcacata 41912555  T
Q  103 tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41912556 tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 41912609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28659357 - 28659512
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||| | |||||||||||||||||||||    
T  28659357 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgattctcacaaaatactctcaccacaatcatcctcaca 28659456  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28659457 tattggtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta 28659512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33351681 - 33351531
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||  | |||||||||| | ||||||||| |||||||||||    
T  33351681 attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattttttctcacaaaattctctcaccacattcatcctcaca 33351582  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
     |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  33351581 aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 33351531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 11042422 - 11042287
Alignment:
Q  2 ttactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat 101  Q
    |||||||| ||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||| |  |||||||| ||||||||| |     
T  11042422 ttactattcttttggtgttgccatgtgtccctttcttttttacaaatgctctcatcatattgatcctcacaaaatactttcaccacattcatcctcaaaa 11042323  T
Q  102 atttgtatttaatgttcatgtataaaaggaagtttt 137  Q
     ||| ||||||||||| | | |||||||||||||||    
T  11042322 gtttctatttaatgtttacgaataaaaggaagtttt 11042287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 3564746 - 3564819
Alignment:
Q  80 ctcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattcta 153  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  3564746 ctcaccacattcatcctcacaaatttgtatttaatgtttatgtataaaaggaagttttacaatttcaatttcta 3564819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 2870743 - 2870841
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  2870743 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 2870841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 26913007 - 26913105
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  26913007 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 26913105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 3650475 - 3650363
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    |||||| |||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  3650475 tttttataaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 3650377  T
Q  138 acaatatcaaattc 151  Q
     |||  ||||||||    
T  3650376 tcaaattcaaattc 3650363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 24255560 - 24255672
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | || |||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  24255560 tttttacaaatactctcaccacattcatcctcacaaa-tactcttaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 24255658  T
Q  138 acaatatcaaattc 151  Q
     |||  ||||||||    
T  24255659 tcaaattcaaattc 24255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 21418759 - 21418660
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||| ||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||    
T  21418759 ttttttgcaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt 21418661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8656 - 8499
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac- 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||     
T  8656 attactattgttttggtgttgccacatgtccctttcttttttacaaatgttctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca 8557  T
Q  100 -atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8556 tatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 8499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 43148 - 42993
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||| |||||||||| | |||||||||||||||||||||    
T  43148 attactattgttttggtgttgccagatgtccctttcttttttacaaatgctctaaccttattgattctcacaaaatactctcaccacaatcatcctcaca 43049  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43048 tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta 42993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10118540 - 10118390
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||| |||| ||||||||| |||||||||||| | ||||||||| |||||||||||    
T  10118540 attactattgttttggtgttgtcatatgtccctttcttttttacaaatactctcatcatattgttcctcacaaaatactctcaccacattcatcctcaca 10118441  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
     |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  10118440 aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 10118390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 10018101 - 10017981
Alignment:
Q  31 cctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaagg 130  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||| ||||||||    
T  10018101 cctttcttttttacaaatgctctcaccatattgttcctcacaaaatgctctcaccacattcatcctcacaaatttgtatttaatgcttatgaataaaagg 10018002  T
Q  131 aagttttacaatatcaaattc 151  Q
    ||||||| |||  ||||||||    
T  10018001 aagtttttcaaattcaaattc 10017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10255588 - 10255438
Alignment:
Q  1 attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca 100  Q
    |||| |||||||||||||||||||||    ||||||||||||||||||| | | | ||||||  |||||||||||||| ||||| ||| |||||||||||    
T  10255588 attattattgttttggtgttgccacaatttcctttcttttttacaaatgttttcaccatattattcctcacaaaatgctctcactacattcatcctcaca 10255489  T
Q  101 tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
     |||||||||||||| | ||| ||||||||||||||| |||  ||||||||    
T  10255488 aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc 10255438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 41756869 - 41756985
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || |||||||||||||||    
T  41756869 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt 41756968  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  41756969 tacaatttcaatttcta 41756985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 37797345 - 37797462
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  37797345 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 37797443  T
Q  138 acaatatcaaattctatta 156  Q
     |||  |||||||| ||||    
T  37797444 tcaaattcaaattcaatta 37797462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 27276289 - 27276191
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  27276289 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 27276191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 58173 - 58089
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgt 122  Q
    ||||||||||| || | |  ||||| | ||||||||||||| || || ||||||||||||  | |||||||||||||||||||||    
T  58173 tttttacaaatactatcacaatattcaccctcacaaaatgctctgactacaatcatcctcgtaaatttgtatttaatgttcatgt 58089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 15321424 - 15321536
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | |  |||||||| ||| | ||| | |||||||||||||| | ||| |||||||||||||||    
T  15321424 tttttacaaatactctcaccacattcatcctcacaaa-tactttcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt 15321522  T
Q  138 acaatatcaaattc 151  Q
     |||  ||||||||    
T  15321523 tcaaattcaaattc 15321536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 48434 - 48294
Alignment:
Q  11 ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt 110  Q
    ||||||||||| ||  || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| |||||||||||  ||| ||||    
T  48434 ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt 48335  T
Q  111 taatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
    ||||||| ||| ||||||||||||||| |||  ||||||||    
T  48334 taatgtttatgaataaaaggaagtttttcaaattcaaattc 48294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 48689 - 48549
Alignment:
Q  11 ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt 110  Q
    ||||||||||| ||  || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| |||||||||||  ||| ||||    
T  48689 ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt 48590  T
Q  111 taatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
    ||||||| ||| ||||||||||||||| |||  ||||||||    
T  48589 taatgtttatgaataaaaggaagtttttcaaattcaaattc 48549  T

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Target: scaffold0073; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 53220 - 53080
Alignment:
Q  11 ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt 110  Q
    ||||||||||| ||  || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| |||||||||||  ||| ||||    
T  53220 ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt 53121  T
Q  111 taatgttcatgtataaaaggaagttttacaatatcaaattc 151  Q
    ||||||| ||| ||||||||||||||| |||  ||||||||    
T  53120 taatgtttatgaataaaaggaagtttttcaaattcaaattc 53080  T

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Target: scaffold0356 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 2561 - 2677
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || |||||||||||||||    
T  2561 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatataaaaggaagttt 2660  T
Q  137 tacaatatcaaattcta 153  Q
    |||||| |||| |||||    
T  2661 tacaatttcaatttcta 2677  T

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Target: scaffold0276 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 114 - 4
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || |||||||||||||||    
T  114 ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt 15  T
Q  137 tacaatatcaa 147  Q
    |||||| ||||    
T  14 tacaatttcaa 4  T

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Target: scaffold0050 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 12245 - 12129
Alignment:
Q  5 ctattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatt 104  Q
    ||||| ||||| ||||| ||  || |||||| ||||||||||||  ||| | |||||| ||||||||||||||| |||||||||||| |||||||| |||    
T  12245 ctattcttttgatgttgacatgtgtccctttattttttacaaatagtcttaccatattcatcctcacaaaatgctctcaccacaatc-tcctcacaaatt 12147  T
Q  105 tgtatttaatgttcatgt 122  Q
    ||||||||||||||||||    
T  12146 tgtatttaatgttcatgt 12129  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 102998 - 103097
Alignment:
Q  37 ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    |||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||    
T  102998 ttttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt 103096  T

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Target: scaffold0770 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 4700 - 4798
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt 137  Q
    ||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||||    
T  4700 tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt 4798  T

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Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 19157 - 19257
Alignment:
Q  38 tttttacaaatgctctaatcatattgatcctcacaaa-atgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt 136  Q
    ||||||||||| |||| | || ||| ||||||||||| |  | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||    
T  19157 tttttacaaatactctcaccacattcatcctcacaaatactctctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt 19256  T
Q  137 t 137  Q
    |    
T  19257 t 19257  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 189017 - 188973
Alignment:
Q  75 atgcactcaccacaatcatcctcacatatttgtatttaatgttca 119  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  189017 atgctctcaccataatcatcctcacaaatttgtatttaatgttca 188973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 182063 - 182019
Alignment:
Q  75 atgcactcaccacaatcatcctcacatatttgtatttaatgttca 119  Q
    |||| ||| ||||||||||||||||| |||| |||||||||||||    
T  182063 atgctctcgccacaatcatcctcacaaatttatatttaatgttca 182019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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